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The map label for this gene is ycaC [H]

Identifier: 213159017

GI number: 213159017

Start: 3835727

End: 3836353

Strand: Direct

Name: ycaC [H]

Synonym: AB57_3725

Alternate gene names: 213159017

Gene position: 3835727-3836353 (Clockwise)

Preceding gene: 213159012

Following gene: 213159018

Centisome position: 94.7

GC content: 40.19

Gene sequence:

>627_bases
ATGGCTCAAGATTATGTACGCTTAGACAAGGATAATGCTGCGGTTCTTTTAGTTGACCATCAAGCAGGTTTACTTTCTTT
AGTTCGAGATATCGATCCGGATAAATTTAAAAACAACGTACTTGCTGTTGCAAATGCAGCAAAATACTTCAATCTTCCAA
CAATTTTAACAACCAGTTTTGAAACTGGTCCAAACGGTCCTTTAGTTCCTGAGTTAAAAGAAATTCACCCAGATGCACCT
TTTATTCCACGTCCAGGCCAAATCAATGCGTGGGACAATGAAGATTTCGTAAAAGCGGTTAAAGCAACCGGTAAAAAACA
GCTGATTATTGCAGGTGTTGTAACTGAAGTGTGTGTGGCTTTCCCTGCACTATCTGCTTTGGCAGAAGGCTTTGAAGTAT
TTGTAATTACTGATGCTTCTGGTACTTTCAACGAATTAACACGTGATGCAGCTTGGGACCGTATGTCTAAAGCAGGTGCT
CAGCTGATGACTTGGTTCGGTATGGCATGTGAATTACACCGTGACTGGCGTAATGATATTGAAGGTTTGGGTACATTGTT
CTCAAATCATATCCCTGACTACCGTAACCTGATTTCAAGTTACAATCACAACACTAGCCAAAAATAA

Upstream 100 bases:

>100_bases
GACTTAATTACGACAACAAACTCATCTAGCATGATTTTAGGCACTGATGACCTACTCAATAATTTTTGATTATTCAATTT
GATAACATGAGGACATAAAA

Downstream 100 bases:

>100_bases
GTTCTACTGCCAAGATTAGAATGCTTAAGCATTCTAATCTTGAATTTAAATGGGTTGAACAGACATTGATAAGCTCTTTT
GATGATTTTTATTATTTCTA

Product: isochorismate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAQDYVRLDKDNAAVLLVDHQAGLLSLVRDIDPDKFKNNVLAVANAAKYFNLPTILTTSFETGPNGPLVPELKEIHPDAP
FIPRPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSALAEGFEVFVITDASGTFNELTRDAAWDRMSKAGA
QLMTWFGMACELHRDWRNDIEGLGTLFSNHIPDYRNLISSYNHNTSQK

Sequences:

>Translated_208_residues
MAQDYVRLDKDNAAVLLVDHQAGLLSLVRDIDPDKFKNNVLAVANAAKYFNLPTILTTSFETGPNGPLVPELKEIHPDAP
FIPRPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSALAEGFEVFVITDASGTFNELTRDAAWDRMSKAGA
QLMTWFGMACELHRDWRNDIEGLGTLFSNHIPDYRNLISSYNHNTSQK
>Mature_207_residues
AQDYVRLDKDNAAVLLVDHQAGLLSLVRDIDPDKFKNNVLAVANAAKYFNLPTILTTSFETGPNGPLVPELKEIHPDAPF
IPRPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSALAEGFEVFVITDASGTFNELTRDAAWDRMSKAGAQ
LMTWFGMACELHRDWRNDIEGLGTLFSNHIPDYRNLISSYNHNTSQK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=208, Percent_Identity=83.6538461538462, Blast_Score=369, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 22989; Mature: 22858

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDYVRLDKDNAAVLLVDHQAGLLSLVRDIDPDKFKNNVLAVANAAKYFNLPTILTTSF
CCCCCEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHCCEEEEEHHHHHCCCCEEEEECC
ETGPNGPLVPELKEIHPDAPFIPRPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
FPALSALAEGFEVFVITDASGTFNELTRDAAWDRMSKAGAQLMTWFGMACELHRDWRNDI
HHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLGTLFSNHIPDYRNLISSYNHNTSQK
HHHHHHHHHCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AQDYVRLDKDNAAVLLVDHQAGLLSLVRDIDPDKFKNNVLAVANAAKYFNLPTILTTSF
CCCCEEECCCCCEEEEEECCHHHHHHHHHCCHHHHHCCEEEEEHHHHHCCCCEEEEECC
ETGPNGPLVPELKEIHPDAPFIPRPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
FPALSALAEGFEVFVITDASGTFNELTRDAAWDRMSKAGAQLMTWFGMACELHRDWRNDI
HHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGLGTLFSNHIPDYRNLISSYNHNTSQK
HHHHHHHHHCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]