Click here to switch to the map view.

The map label for this gene is fimZ [H]

Identifier: 213158933

GI number: 213158933

Start: 3739764

End: 3740237

Strand: Reverse

Name: fimZ [H]

Synonym: AB57_3634

Alternate gene names: 213158933

Gene position: 3740237-3739764 (Counterclockwise)

Preceding gene: 213158934

Following gene: 213158932

Centisome position: 92.34

GC content: 39.87

Gene sequence:

>474_bases
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA

Upstream 100 bases:

>100_bases
GTTTTTTAACAATAATGAAAGTTGGCATGGTTGCTGCAATATATTTCATAGCTGAAAAAGCTTATATAAAAACATACATA
CAATCTTTGGGGAAAAGGCT

Downstream 100 bases:

>100_bases
GTTATCGTAAATTAAAAAACGCACCTCATGGTGCGTTTTTATTTGTAAATTATGAATATTTAAATAAAATAATTGAATTA
TTTAGTGTATTAATATCTGA

Product: type IV pilin structural subunit

Products: NA

Alternate protein names: Pilin; Serogroup D [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA

Sequences:

>Translated_157_residues
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
>Mature_157_residues
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 15794; Mature: 15794

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
KTTVGEAAGECAIGATGSNILDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSAST
CCCCCCCCCCEEECCCCCHHHHCCCCCCCEEECCCCCCEEEEECCCCEEEEEECCCCCHH
ALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
HHCCCCCEEEEEECCCCCEEECCHHHHHCCCCCCCCC
>Mature Secondary Structure
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
KTTVGEAAGECAIGATGSNILDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSAST
CCCCCCCCCCEEECCCCCHHHHCCCCCCCEEECCCCCCEEEEECCCCEEEEEECCCCCHH
ALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
HHCCCCCEEEEEECCCCCEEECCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675418 [H]