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The map label for this gene is yjgF [C]

Identifier: 213158929

GI number: 213158929

Start: 3736352

End: 3736735

Strand: Direct

Name: yjgF [C]

Synonym: AB57_3630

Alternate gene names: 213158929

Gene position: 3736352-3736735 (Clockwise)

Preceding gene: 213158928

Following gene: 213158930

Centisome position: 92.24

GC content: 40.1

Gene sequence:

>384_bases
ATGTCCCGTCAAGTCATTCATACTGAAAATGCCCCTGCTGCCATCGGCACATATTCTCAAGCCATTTTAGTAGGTAACAC
ACTATATTTATCAGGGCAAATTGGTTTAGATCCTTACAGTATGGAACTTGTAGACGGTATTGAAGCTCAAATCCGCCGTG
TTTTTGATAACCTTAAAGCAGTATGTGAAGCTGCAGGCGGCACACTTGCAGATATTGCAAAGCTCAATATTTTTCTTACT
GATTTATCTAATTTCCAACTCGTTAACCAAATTATGGGCGAATATTTTGCTCAACCATACCCAGCTCGTGCTGCACTTGG
TGTAGCAAGCCTGCCTAAAGGGGCTTTAGTTGAAATGGATGGAATTGTTATTATTAATCAGTAA

Upstream 100 bases:

>100_bases
AATCTAACTTCTAGAAGTACCTAATCAATTAAATCGATGATACTTTTGTCAAAACGTATCATCGATTATGATGAAAAAAG
ATTTAATCAAGGAGAACCAA

Downstream 100 bases:

>100_bases
GATAAAATATTAACTAGAAATTATTTAGCTCTAAAATTAGATACCACCCCAGCTTAAAAAGCTGAGTAACTCTCAGATTT
CCGCTTAGGTGGTATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSRQVIHTENAPAAIGTYSQAILVGNTLYLSGQIGLDPYSMELVDGIEAQIRRVFDNLKAVCEAAGGTLADIAKLNIFLT
DLSNFQLVNQIMGEYFAQPYPARAALGVASLPKGALVEMDGIVIINQ

Sequences:

>Translated_127_residues
MSRQVIHTENAPAAIGTYSQAILVGNTLYLSGQIGLDPYSMELVDGIEAQIRRVFDNLKAVCEAAGGTLADIAKLNIFLT
DLSNFQLVNQIMGEYFAQPYPARAALGVASLPKGALVEMDGIVIINQ
>Mature_126_residues
SRQVIHTENAPAAIGTYSQAILVGNTLYLSGQIGLDPYSMELVDGIEAQIRRVFDNLKAVCEAAGGTLADIAKLNIFLTD
LSNFQLVNQIMGEYFAQPYPARAALGVASLPKGALVEMDGIVIINQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=123, Percent_Identity=43.9024390243902, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI87082396, Length=124, Percent_Identity=41.1290322580645, Blast_Score=101, Evalue=1e-23,
Organism=Escherichia coli, GI87082213, Length=125, Percent_Identity=35.2, Blast_Score=95, Evalue=1e-21,
Organism=Escherichia coli, GI1787245, Length=128, Percent_Identity=32.03125, Blast_Score=72, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71982068, Length=124, Percent_Identity=46.7741935483871, Blast_Score=129, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI25148896, Length=124, Percent_Identity=46.7741935483871, Blast_Score=128, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71982075, Length=124, Percent_Identity=46.7741935483871, Blast_Score=128, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6322138, Length=119, Percent_Identity=36.1344537815126, Blast_Score=88, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320899, Length=100, Percent_Identity=40, Blast_Score=75, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19921376, Length=123, Percent_Identity=38.2113821138211, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13599; Mature: 13468

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQVIHTENAPAAIGTYSQAILVGNTLYLSGQIGLDPYSMELVDGIEAQIRRVFDNLKA
CCCCEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VCEAAGGTLADIAKLNIFLTDLSNFQLVNQIMGEYFAQPYPARAALGVASLPKGALVEMD
HHHHCCCCHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEC
GIVIINQ
CEEEEEC
>Mature Secondary Structure 
SRQVIHTENAPAAIGTYSQAILVGNTLYLSGQIGLDPYSMELVDGIEAQIRRVFDNLKA
CCCEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VCEAAGGTLADIAKLNIFLTDLSNFQLVNQIMGEYFAQPYPARAALGVASLPKGALVEMD
HHHHCCCCHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEC
GIVIINQ
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2722750 [H]