| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is 213158869
Identifier: 213158869
GI number: 213158869
Start: 3672649
End: 3673749
Strand: Reverse
Name: 213158869
Synonym: AB57_3566
Alternate gene names: NA
Gene position: 3673749-3672649 (Counterclockwise)
Preceding gene: 213158870
Following gene: 213158867
Centisome position: 90.7
GC content: 40.69
Gene sequence:
>1101_bases GTGAGTGTTATACAGCCAGAATGGTTACAGATTTTAAAACCGAATTTTAAGGTTTTACCCCTAAAAGAACGGTTGCTTTG TGGCGTTGGAGCGCTATGTGGTTTAGCAATTTCCTCGTTAATTAGTTGGTATGTTTTAGGCGGAATTAATGCTTGGTACA TTGCACCAATGGGGGCCTCATCTGTTCTTTTATTTGCTGTACCTACCAGTCCATTGGCTCAGCCTTGGAATGTTATTGTC GGTAATACATTAGCCGGAATTATTGGGGTCGCCTGCGCACAGTGGATTCCGGATTTAACCACAGCTTTTAGCGTGGCTGT GGGTTTGGCCATATTTTTGATGATGACCACCGACTCGTTGCATCCGCCTAGTGGGGCAGTTGCGATTACGGCTGTGTTGG GCGGTGCTGCCATTCATAAATTAGGCTTTTATTTCGTTTTTTATCCGGTTCTGCTCAACTCATTACTTCTACTCGGTTTT GCTGTATTTTTTAATCGATTGATTGGGCGACATTATCCGGTTACTGCACATTTAAATGAGCGAAGCAAAGATCCAACACC TACTCAAAAAGTATCAATTCAGCCAAAAGATATTGAGTACGCATTAGAACATCATACTGAATTGTTAGATATCAGCCAGT ACGACTTAGAAAAAATCATTTTAGAAGCGCAAGAACATGCCAATGAACGCATGGTGAACCAATATACCTGTCAGGATATT ATGAGTCGCGATGTGATTAAATTGCATGAAAATGATGATATTCATCAGGCATTAGATAAATTTAAACAAGTGAACCTAAT GAGCCTGCCTGTAGTTAATGCAGATAACCATTTAGTGGGTACTTTGGCGCTATATGAAGTTGTGGAATGGTTTAAAGGGG CAACAGATCCAAGAAACTCTTGGCAGCATTACGTAAGACAAATTATGAGTCGTCGAGTAGTTACTGTACTGCCAACTCAG CCGATTCAAGACCTTGTACCTTACTTTGTTGAGAAGTCTTTTAACTATATTCCGGTGGTTGAGGAACGAAAACTGATTGG AATCATTAGCCGTGCAGATATGATTGCGGCTTTACAACAGCAGTTAAATCGTAAATTGTAA
Upstream 100 bases:
>100_bases TTTTCTGATAATTGAAAGATATAATTTAAATGCACTTTATGCGGCTTTGGGCGTATACTTTTGCCCGTTATAAATAACGG CATATCCCCTAAGGTGTACT
Downstream 100 bases:
>100_bases TTTTAAATATAAAAAAAGCTACGGTTGATTAGGGGATGCAACCGTAGCGACCAAAATAAACTAAGTTATTTAATGTATTT GTTCTTCTCGTACAGTGCGA
Product: HPP domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSVIQPEWLQILKPNFKVLPLKERLLCGVGALCGLAISSLISWYVLGGINAWYIAPMGASSVLLFAVPTSPLAQPWNVIV GNTLAGIIGVACAQWIPDLTTAFSVAVGLAIFLMMTTDSLHPPSGAVAITAVLGGAAIHKLGFYFVFYPVLLNSLLLLGF AVFFNRLIGRHYPVTAHLNERSKDPTPTQKVSIQPKDIEYALEHHTELLDISQYDLEKIILEAQEHANERMVNQYTCQDI MSRDVIKLHENDDIHQALDKFKQVNLMSLPVVNADNHLVGTLALYEVVEWFKGATDPRNSWQHYVRQIMSRRVVTVLPTQ PIQDLVPYFVEKSFNYIPVVEERKLIGIISRADMIAALQQQLNRKL
Sequences:
>Translated_366_residues MSVIQPEWLQILKPNFKVLPLKERLLCGVGALCGLAISSLISWYVLGGINAWYIAPMGASSVLLFAVPTSPLAQPWNVIV GNTLAGIIGVACAQWIPDLTTAFSVAVGLAIFLMMTTDSLHPPSGAVAITAVLGGAAIHKLGFYFVFYPVLLNSLLLLGF AVFFNRLIGRHYPVTAHLNERSKDPTPTQKVSIQPKDIEYALEHHTELLDISQYDLEKIILEAQEHANERMVNQYTCQDI MSRDVIKLHENDDIHQALDKFKQVNLMSLPVVNADNHLVGTLALYEVVEWFKGATDPRNSWQHYVRQIMSRRVVTVLPTQ PIQDLVPYFVEKSFNYIPVVEERKLIGIISRADMIAALQQQLNRKL >Mature_365_residues SVIQPEWLQILKPNFKVLPLKERLLCGVGALCGLAISSLISWYVLGGINAWYIAPMGASSVLLFAVPTSPLAQPWNVIVG NTLAGIIGVACAQWIPDLTTAFSVAVGLAIFLMMTTDSLHPPSGAVAITAVLGGAAIHKLGFYFVFYPVLLNSLLLLGFA VFFNRLIGRHYPVTAHLNERSKDPTPTQKVSIQPKDIEYALEHHTELLDISQYDLEKIILEAQEHANERMVNQYTCQDIM SRDVIKLHENDDIHQALDKFKQVNLMSLPVVNADNHLVGTLALYEVVEWFKGATDPRNSWQHYVRQIMSRRVVTVLPTQP IQDLVPYFVEKSFNYIPVVEERKLIGIISRADMIAALQQQLNRKL
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 40920; Mature: 40789
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIQPEWLQILKPNFKVLPLKERLLCGVGALCGLAISSLISWYVLGGINAWYIAPMGAS CCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC SVLLFAVPTSPLAQPWNVIVGNTLAGIIGVACAQWIPDLTTAFSVAVGLAIFLMMTTDSL CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPPSGAVAITAVLGGAAIHKLGFYFVFYPVLLNSLLLLGFAVFFNRLIGRHYPVTAHLNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RSKDPTPTQKVSIQPKDIEYALEHHTELLDISQYDLEKIILEAQEHANERMVNQYTCQDI CCCCCCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSRDVIKLHENDDIHQALDKFKQVNLMSLPVVNADNHLVGTLALYEVVEWFKGATDPRNS HHCCCEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH WQHYVRQIMSRRVVTVLPTQPIQDLVPYFVEKSFNYIPVVEERKLIGIISRADMIAALQQ HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QLNRKL HHHCCC >Mature Secondary Structure SVIQPEWLQILKPNFKVLPLKERLLCGVGALCGLAISSLISWYVLGGINAWYIAPMGAS CCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC SVLLFAVPTSPLAQPWNVIVGNTLAGIIGVACAQWIPDLTTAFSVAVGLAIFLMMTTDSL CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPPSGAVAITAVLGGAAIHKLGFYFVFYPVLLNSLLLLGFAVFFNRLIGRHYPVTAHLNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RSKDPTPTQKVSIQPKDIEYALEHHTELLDISQYDLEKIILEAQEHANERMVNQYTCQDI CCCCCCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSRDVIKLHENDDIHQALDKFKQVNLMSLPVVNADNHLVGTLALYEVVEWFKGATDPRNS HHCCCEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH WQHYVRQIMSRRVVTVLPTQPIQDLVPYFVEKSFNYIPVVEERKLIGIISRADMIAALQQ HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH QLNRKL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]