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The map label for this gene is 213158803

Identifier: 213158803

GI number: 213158803

Start: 3616115

End: 3616681

Strand: Reverse

Name: 213158803

Synonym: AB57_3498

Alternate gene names: NA

Gene position: 3616681-3616115 (Counterclockwise)

Preceding gene: 213158804

Following gene: 213158802

Centisome position: 89.29

GC content: 39.68

Gene sequence:

>567_bases
ATGAAAGATCATGTACTCAATAAAAAAGTGCTTTTGGTCGCAGGGTGCATTTCTGTTTCTGCATGTTTACAGGTGTTTCC
AGATTATTTTATCTATTGGCGTGAAAGCTTACTCGGCGAGTTCTGGCGTTTATGGACAGCGCACTGGGTACATGTCGGAT
GGATTCACTTTCTTTTAAATATGATGGCATTTGCGTGTTTGCCTTTCATATTTCCCCATACCAAAGTGTGGCACATTTTA
AGTCTTCTTTTTCTTTTACCACCTTTTATTAGCTTGGTGTTCTATTTTTATTTGCCCAATATCGATGCATATGCCGGCCT
TTCTGGTGTACTCCATGGGTTATATACCGCAGTTGCTTTGGTTTACTTGCAATACCGTAAAGAAAGGAATTTTGCATTTC
TGGTCTTAGGTTTAATTGTTGCAAAGTTGATTTGGGAAAATACATTTGGGCAAACAGGAACAGCCCAGCTCATTGGTAGT
CCAGTTTTAACTGAAGCTCATCTATATGGGGCGATTGGTGGTGCAATCTTTGGAGGATGCTATTGGCTCATACAAAGATT
CAAATAG

Upstream 100 bases:

>100_bases
CGAAAACTGCACCAGCACAGTAAATAGATCTGAAGGAACTCACTCCTTAGGGTTACTAACTCTAGTAATCGTAAGGAGTC
TGGTTTAAAAGGAGTGTGCT

Downstream 100 bases:

>100_bases
AAAGATTGACAATACAAACTGTTAAAAAAGTGATTTTAGTCATTCTTTATTGATAAAGTTTGATGCAAATTTGATCGTTG
AATAAAGGGATTGGTAGAAG

Product: rhomboid family peptidase

Products: NA

Alternate protein names: Rhomboid Family Peptidase; Rhomboid Family Integral Membrane Protein; Integral Membrane Protein

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKDHVLNKKVLLVAGCISVSACLQVFPDYFIYWRESLLGEFWRLWTAHWVHVGWIHFLLNMMAFACLPFIFPHTKVWHIL
SLLFLLPPFISLVFYFYLPNIDAYAGLSGVLHGLYTAVALVYLQYRKERNFAFLVLGLIVAKLIWENTFGQTGTAQLIGS
PVLTEAHLYGAIGGAIFGGCYWLIQRFK

Sequences:

>Translated_188_residues
MKDHVLNKKVLLVAGCISVSACLQVFPDYFIYWRESLLGEFWRLWTAHWVHVGWIHFLLNMMAFACLPFIFPHTKVWHIL
SLLFLLPPFISLVFYFYLPNIDAYAGLSGVLHGLYTAVALVYLQYRKERNFAFLVLGLIVAKLIWENTFGQTGTAQLIGS
PVLTEAHLYGAIGGAIFGGCYWLIQRFK
>Mature_188_residues
MKDHVLNKKVLLVAGCISVSACLQVFPDYFIYWRESLLGEFWRLWTAHWVHVGWIHFLLNMMAFACLPFIFPHTKVWHIL
SLLFLLPPFISLVFYFYLPNIDAYAGLSGVLHGLYTAVALVYLQYRKERNFAFLVLGLIVAKLIWENTFGQTGTAQLIGS
PVLTEAHLYGAIGGAIFGGCYWLIQRFK

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21550; Mature: 21550

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDHVLNKKVLLVAGCISVSACLQVFPDYFIYWRESLLGEFWRLWTAHWVHVGWIHFLLN
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAFACLPFIFPHTKVWHILSLLFLLPPFISLVFYFYLPNIDAYAGLSGVLHGLYTAVAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VYLQYRKERNFAFLVLGLIVAKLIWENTFGQTGTAQLIGSPVLTEAHLYGAIGGAIFGGC
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
YWLIQRFK
HHHHHHCC
>Mature Secondary Structure
MKDHVLNKKVLLVAGCISVSACLQVFPDYFIYWRESLLGEFWRLWTAHWVHVGWIHFLLN
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAFACLPFIFPHTKVWHILSLLFLLPPFISLVFYFYLPNIDAYAGLSGVLHGLYTAVAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VYLQYRKERNFAFLVLGLIVAKLIWENTFGQTGTAQLIGSPVLTEAHLYGAIGGAIFGGC
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
YWLIQRFK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA