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The map label for this gene is yliI [C]

Identifier: 213158748

GI number: 213158748

Start: 4007344

End: 4008513

Strand: Reverse

Name: yliI [C]

Synonym: AB57_3882

Alternate gene names: 213158748

Gene position: 4008513-4007344 (Counterclockwise)

Preceding gene: 213158749

Following gene: 213158747

Centisome position: 98.96

GC content: 42.56

Gene sequence:

>1170_bases
ATGAGACGATTAGCAGCCCCCTTATTATGTAGTAGTTTCTTCTTGTTAATGGCCTGTGGCTCTAATAATACTAATTCAAA
AAGTCCTGAACAAAATACAACTGCAAAAACAGAGCAAACCAATGCTGCAAAACAAATTTATCAGGTCGAGGCAGTCGCAC
ATTTTAAAGAGCCTTGGGCGATCACCAGTTTGCCTGATCAACGCTTATTGGTGACTGAACGGCAAGGTAAGCTAAAAATT
TTTAATCCACAAAATAAACAGATGTTGGATATCCAAGGTATTCCAGCCGTAAGTTATGGTGGGCAGGGCGGTTTAGGGGA
TGTAGCCTTGCACCCAGACTTTGCCAAAAATCACTGGATATATCTTAGTTATGCAGCCAAAGGGCAAGGTGGGTCTGGTG
CAGTGATTTCACGTGCAAAATTAGATTTATCTAATCCTAATCAGCCAAAACTCACCGATGTAAAGCAGATTTGGCAACAA
GTACCTAAAGTCTCAGGACAAGGCCATTATGGGCATCGCATGCTTTTTGGTGCAGATGGTAAGCTTTGGGTCAGTTCAGG
TGAGCGCCAAAAGTTTGACCCTGCCCAAAATATGAAAAGCAACTTGGGCAAAATCTTGCGTTTAAATGACGACGGTTCAG
CAGCCTTAGGTAACCCTTTTTATAAGCAAGGCGGTGTCACTGCTGAAATATGGTCACTTGGACATCGTAACCCATTAGGA
ATGGCCTTTGACCGTAAAGGACAGCTATGGGTGGTTGAGATGGGGCCTAAAGGTGGTGATGAGCTTAATATTATTACCAA
AGGCGAAAACTATGGTTATCCGATTGTTTCAAATGGAGATCATTATTCAGGTCAGCCTATTCCAGATCATCACACGCGCC
CAGAGTTTAAAGCGCCAGAAATTGACTGGACCCCTGTAATCTCACCGTCGAGCTTAATTATTTATCGCGGGCAACAATTT
CCTGCATGGCAAAATAAAGCCTTAATTGGCGGGTTATCTTCCGAAGCCATTATAGTTGTAGATTTAGAGCATAAGCCCGT
AAAAGAAGTGCAGAGATTAGAAATGAAGCAACGTATTCGTGGTTTACATGAAGCACAAGACGGTTCAATTTGGGTAATTG
AAGACGGTTCAAAAGCCCGTCTATTGAAGCTGAGTAAGAAACTCTCTTAA

Upstream 100 bases:

>100_bases
GAGCATTTTTAATTACAGCGTATAATAAAGTAACATTTTTATCGTAAATTTTTTAATCATCTCCGTTATATAAAAATAAA
AGCAAAAGGAGATAAAAATG

Downstream 100 bases:

>100_bases
GGCCTTGAGTTAGCCTATAAATAAAGGATGTGTCTCATAGATTCAAATTGTAGATTTCTGTGAGACACAATAGACTATAG
TGAAAAGACGATAAAGCTAT

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRRLAAPLLCSSFFLLMACGSNNTNSKSPEQNTTAKTEQTNAAKQIYQVEAVAHFKEPWAITSLPDQRLLVTERQGKLKI
FNPQNKQMLDIQGIPAVSYGGQGGLGDVALHPDFAKNHWIYLSYAAKGQGGSGAVISRAKLDLSNPNQPKLTDVKQIWQQ
VPKVSGQGHYGHRMLFGADGKLWVSSGERQKFDPAQNMKSNLGKILRLNDDGSAALGNPFYKQGGVTAEIWSLGHRNPLG
MAFDRKGQLWVVEMGPKGGDELNIITKGENYGYPIVSNGDHYSGQPIPDHHTRPEFKAPEIDWTPVISPSSLIIYRGQQF
PAWQNKALIGGLSSEAIIVVDLEHKPVKEVQRLEMKQRIRGLHEAQDGSIWVIEDGSKARLLKLSKKLS

Sequences:

>Translated_389_residues
MRRLAAPLLCSSFFLLMACGSNNTNSKSPEQNTTAKTEQTNAAKQIYQVEAVAHFKEPWAITSLPDQRLLVTERQGKLKI
FNPQNKQMLDIQGIPAVSYGGQGGLGDVALHPDFAKNHWIYLSYAAKGQGGSGAVISRAKLDLSNPNQPKLTDVKQIWQQ
VPKVSGQGHYGHRMLFGADGKLWVSSGERQKFDPAQNMKSNLGKILRLNDDGSAALGNPFYKQGGVTAEIWSLGHRNPLG
MAFDRKGQLWVVEMGPKGGDELNIITKGENYGYPIVSNGDHYSGQPIPDHHTRPEFKAPEIDWTPVISPSSLIIYRGQQF
PAWQNKALIGGLSSEAIIVVDLEHKPVKEVQRLEMKQRIRGLHEAQDGSIWVIEDGSKARLLKLSKKLS
>Mature_389_residues
MRRLAAPLLCSSFFLLMACGSNNTNSKSPEQNTTAKTEQTNAAKQIYQVEAVAHFKEPWAITSLPDQRLLVTERQGKLKI
FNPQNKQMLDIQGIPAVSYGGQGGLGDVALHPDFAKNHWIYLSYAAKGQGGSGAVISRAKLDLSNPNQPKLTDVKQIWQQ
VPKVSGQGHYGHRMLFGADGKLWVSSGERQKFDPAQNMKSNLGKILRLNDDGSAALGNPFYKQGGVTAEIWSLGHRNPLG
MAFDRKGQLWVVEMGPKGGDELNIITKGENYGYPIVSNGDHYSGQPIPDHHTRPEFKAPEIDWTPVISPSSLIIYRGQQF
PAWQNKALIGGLSSEAIIVVDLEHKPVKEVQRLEMKQRIRGLHEAQDGSIWVIEDGSKARLLKLSKKLS

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI124248546, Length=261, Percent_Identity=26.8199233716475, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI187936955, Length=323, Percent_Identity=24.1486068111455, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI187936953, Length=342, Percent_Identity=23.3918128654971, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1787060, Length=358, Percent_Identity=37.9888268156425, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42949; Mature: 42949

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAAPLLCSSFFLLMACGSNNTNSKSPEQNTTAKTEQTNAAKQIYQVEAVAHFKEPWA
CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
ITSLPDQRLLVTERQGKLKIFNPQNKQMLDIQGIPAVSYGGQGGLGDVALHPDFAKNHWI
EECCCCCEEEEEECCCCEEEECCCCCEEEEECCCCEEECCCCCCCCCEEECCCCCCCCEE
YLSYAAKGQGGSGAVISRAKLDLSNPNQPKLTDVKQIWQQVPKVSGQGHYGHRMLFGADG
EEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
KLWVSSGERQKFDPAQNMKSNLGKILRLNDDGSAALGNPFYKQGGVTAEIWSLGHRNPLG
EEEECCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCCCCC
MAFDRKGQLWVVEMGPKGGDELNIITKGENYGYPIVSNGDHYSGQPIPDHHTRPEFKAPE
EEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
IDWTPVISPSSLIIYRGQQFPAWQNKALIGGLSSEAIIVVDLEHKPVKEVQRLEMKQRIR
CCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHH
GLHEAQDGSIWVIEDGSKARLLKLSKKLS
HHHCCCCCCEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure
MRRLAAPLLCSSFFLLMACGSNNTNSKSPEQNTTAKTEQTNAAKQIYQVEAVAHFKEPWA
CCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
ITSLPDQRLLVTERQGKLKIFNPQNKQMLDIQGIPAVSYGGQGGLGDVALHPDFAKNHWI
EECCCCCEEEEEECCCCEEEECCCCCEEEEECCCCEEECCCCCCCCCEEECCCCCCCCEE
YLSYAAKGQGGSGAVISRAKLDLSNPNQPKLTDVKQIWQQVPKVSGQGHYGHRMLFGADG
EEEEEECCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
KLWVSSGERQKFDPAQNMKSNLGKILRLNDDGSAALGNPFYKQGGVTAEIWSLGHRNPLG
EEEECCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEEEEECCCCCCCCC
MAFDRKGQLWVVEMGPKGGDELNIITKGENYGYPIVSNGDHYSGQPIPDHHTRPEFKAPE
EEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
IDWTPVISPSSLIIYRGQQFPAWQNKALIGGLSSEAIIVVDLEHKPVKEVQRLEMKQRIR
CCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHH
GLHEAQDGSIWVIEDGSKARLLKLSKKLS
HHHCCCCCCEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]