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The map label for this gene is arrD [H]

Identifier: 213158713

GI number: 213158713

Start: 2760640

End: 2761194

Strand: Reverse

Name: arrD [H]

Synonym: AB57_2671

Alternate gene names: 213158713

Gene position: 2761194-2760640 (Counterclockwise)

Preceding gene: 213158714

Following gene: 213158709

Centisome position: 68.17

GC content: 41.44

Gene sequence:

>555_bases
ATGACAACTAAACCATTCTTCGATGCTGCCCGAGTAATTGCAGGCGGCAAGCTTACACAGGCGCAAGTAGACGATCTAAA
TAAAGTGGTCGAAAAACTTGCACCAGGTGGAAAAACTACAAGTGATGATGGTATAGATTTAATAACTAGTTTTGAAGGCA
CGCGATTCAATGCTTACGATGATGGTGTAGGGGTTTGGACCATTGGTACTGGCACCACAGTTTATCCAAATGGCGTGAAG
GTCAAGAAGGGCGATACTTGCACAGCAGAACAAGCTAAGACTTACTTTAAACATGACTTGGCTAAATTCGAAAAGACAGT
TAATGAATCTGTGACAGCGCCTTTAACTCAAAATCAATTTGATGCTTTGGTATCGCTGACTTACAACATTGGCTCAGGTG
CTTTTAATAATTCAACCTTATTAAAAAAACTGAATAAAGGTGACTATCAAGGCGCTGCTGATCAATTCCTTGTCTGGAAT
AAGGCAGGCGGTAAAGTCATGAAAGGTCTAGTTCGTCGCCGAGAAGCAGAGCGAGCACTCTTTTTAAAGAAGTAA

Upstream 100 bases:

>100_bases
CTGATTAATACGGCATTGGGTTTTATTGCTGGGGCTATGACAACAGCATGTGGGTTTTATTTTGGTAGCTCTGAGTTAGA
GAAAAAGAAAGGTGAATCCA

Downstream 100 bases:

>100_bases
CTTATATGTGTAAGCGTACTAAGTTGCAACAATCATCACATTGCTGTGCCTCCTCTTCTCAGGTTGCACAGCTCACACAA
TTAACACGTCTGTAAATGTT

Product: lysozyme

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTTKPFFDAARVIAGGKLTQAQVDDLNKVVEKLAPGGKTTSDDGIDLITSFEGTRFNAYDDGVGVWTIGTGTTVYPNGVK
VKKGDTCTAEQAKTYFKHDLAKFEKTVNESVTAPLTQNQFDALVSLTYNIGSGAFNNSTLLKKLNKGDYQGAADQFLVWN
KAGGKVMKGLVRRREAERALFLKK

Sequences:

>Translated_184_residues
MTTKPFFDAARVIAGGKLTQAQVDDLNKVVEKLAPGGKTTSDDGIDLITSFEGTRFNAYDDGVGVWTIGTGTTVYPNGVK
VKKGDTCTAEQAKTYFKHDLAKFEKTVNESVTAPLTQNQFDALVSLTYNIGSGAFNNSTLLKKLNKGDYQGAADQFLVWN
KAGGKVMKGLVRRREAERALFLKK
>Mature_183_residues
TTKPFFDAARVIAGGKLTQAQVDDLNKVVEKLAPGGKTTSDDGIDLITSFEGTRFNAYDDGVGVWTIGTGTTVYPNGVKV
KKGDTCTAEQAKTYFKHDLAKFEKTVNESVTAPLTQNQFDALVSLTYNIGSGAFNNSTLLKKLNKGDYQGAADQFLVWNK
AGGKVMKGLVRRREAERALFLKK

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=132, Percent_Identity=40.9090909090909, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787836, Length=143, Percent_Identity=34.965034965035, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 19994; Mature: 19863

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKPFFDAARVIAGGKLTQAQVDDLNKVVEKLAPGGKTTSDDGIDLITSFEGTRFNAYD
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCC
DGVGVWTIGTGTTVYPNGVKVKKGDTCTAEQAKTYFKHDLAKFEKTVNESVTAPLTQNQF
CCEEEEEECCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DALVSLTYNIGSGAFNNSTLLKKLNKGDYQGAADQFLVWNKAGGKVMKGLVRRREAERAL
HHHHEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FLKK
CCCC
>Mature Secondary Structure 
TTKPFFDAARVIAGGKLTQAQVDDLNKVVEKLAPGGKTTSDDGIDLITSFEGTRFNAYD
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCC
DGVGVWTIGTGTTVYPNGVKVKKGDTCTAEQAKTYFKHDLAKFEKTVNESVTAPLTQNQF
CCEEEEEECCCCEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DALVSLTYNIGSGAFNNSTLLKKLNKGDYQGAADQFLVWNKAGGKVMKGLVRRREAERAL
HHHHEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FLKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]