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The map label for this gene is qseB [H]

Identifier: 213158688

GI number: 213158688

Start: 2733295

End: 2733957

Strand: Reverse

Name: qseB [H]

Synonym: AB57_2644

Alternate gene names: 213158688

Gene position: 2733957-2733295 (Counterclockwise)

Preceding gene: 213158689

Following gene: 213158687

Centisome position: 67.5

GC content: 39.67

Gene sequence:

>663_bases
ATGAGAATTTTGCTTGCAGAAGATGATCGCTCTCAAGCTGAAAGTATTCAATCATGGTTAGAATTAGACGGTTATCAAGT
AGACTGGGTAGAACGTGGTGATTATGCCCTTACAGCAATTGAGCAGCATGATTATGACTGCATTTTGCTTGATAGGGGCT
TGCCCCAACTGGCTGGTGAAAAAGTTTTAACAACCATCCGCCACAAACAAAAAAACGTTCCCGTGATTTTTATTACTGCA
CGTGACAGTATTCATGACCGCGTAGAAGGGCTTGATTTAGGTGCAAATGATTATTTGGTTAAACCATTTAGCCTAGAAGA
ATTATCTGCCCGAATTCGTGCCCAATTACGTAAACAAACTCTGAGTCAGCAATCGATTTTAACGTGGGGTGATTTGCAAC
TTGATACACAAGCGAAAGTTGTATTATCTGCTGGTAAGACTATCGATTTAACAGCAAAAGAATTTCAAATATTACGTAAA
CTTATGGTTCATCCTGAGCATATTATTACCCGTGATCAATTAGAAGAAGCACTTTATGCATGGGGCGAGGAAATCGAGAG
TAACGCAATCGAAGTTTTTATTTATCAGCTTCGAAAGAAAATCGGAAGCAGCAGTATTAAAACCATACGGGGGCTCGGCT
ACCGTATGGGAGATTTAAAATGA

Upstream 100 bases:

>100_bases
ATTTCTACATTTATTCCTTTTAGCCGCATTTAAATCATGCGGCTTTGCTTTTTTTATAAAGACTTGGCAACATCCAATCA
GGATATAACAGGAAAAACAG

Downstream 100 bases:

>100_bases
AATCGAATCGATCATCCTTGCAGTCACAACTGGTTAAAACCACCATGTGGAGCAGTATTGTGGTGGGGCTACTGGCATTA
AGTTTACTCACCATATTTTC

Product: two-component system response regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQHDYDCILLDRGLPQLAGEKVLTTIRHKQKNVPVIFITA
RDSIHDRVEGLDLGANDYLVKPFSLEELSARIRAQLRKQTLSQQSILTWGDLQLDTQAKVVLSAGKTIDLTAKEFQILRK
LMVHPEHIITRDQLEEALYAWGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK

Sequences:

>Translated_220_residues
MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQHDYDCILLDRGLPQLAGEKVLTTIRHKQKNVPVIFITA
RDSIHDRVEGLDLGANDYLVKPFSLEELSARIRAQLRKQTLSQQSILTWGDLQLDTQAKVVLSAGKTIDLTAKEFQILRK
LMVHPEHIITRDQLEEALYAWGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK
>Mature_220_residues
MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQHDYDCILLDRGLPQLAGEKVLTTIRHKQKNVPVIFITA
RDSIHDRVEGLDLGANDYLVKPFSLEELSARIRAQLRKQTLSQQSILTWGDLQLDTQAKVVLSAGKTIDLTAKEFQILRK
LMVHPEHIITRDQLEEALYAWGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=40.8256880733945, Blast_Score=178, Evalue=2e-46,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=39.8148148148148, Blast_Score=163, Evalue=7e-42,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=41.0714285714286, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=33.9366515837104, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=32.4324324324324, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=32.1100917431193, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=30.3571428571429, Blast_Score=110, Evalue=5e-26,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=29.5154185022026, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=32.2869955156951, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=29.8642533936652, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787229, Length=220, Percent_Identity=28.6363636363636, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=28.3261802575107, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=28.82096069869, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788550, Length=123, Percent_Identity=30.0813008130081, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=32.4561403508772, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25177; Mature: 25177

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQHDYDCILLDRGLPQLAGE
CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCHHHHHH
KVLTTIRHKQKNVPVIFITARDSIHDRVEGLDLGANDYLVKPFSLEELSARIRAQLRKQT
HHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH
LSQQSILTWGDLQLDTQAKVVLSAGKTIDLTAKEFQILRKLMVHPEHIITRDQLEEALYA
HHHHHCEEECCEEECCCCEEEEECCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK
HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQHDYDCILLDRGLPQLAGE
CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCHHHHHH
KVLTTIRHKQKNVPVIFITARDSIHDRVEGLDLGANDYLVKPFSLEELSARIRAQLRKQT
HHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHH
LSQQSILTWGDLQLDTQAKVVLSAGKTIDLTAKEFQILRKLMVHPEHIITRDQLEEALYA
HHHHHCEEECCEEECCCCEEEEECCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK
HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]