Click here to switch to the map view.

The map label for this gene is yaiS [C]

Identifier: 213158635

GI number: 213158635

Start: 2679476

End: 2680234

Strand: Reverse

Name: yaiS [C]

Synonym: AB57_2589

Alternate gene names: 213158635

Gene position: 2680234-2679476 (Counterclockwise)

Preceding gene: 213158636

Following gene: 213158634

Centisome position: 66.17

GC content: 40.97

Gene sequence:

>759_bases
ATGATTTCAGGTGAAGGCACACCCGAATTCATGTGGCTTGAGGCATTTAAAAAAAATCCTTTAGATCGGCTGAATTTAAA
GTTGTTTCAGTCTAAAAGAGTGGTGATTGTTGCTCCGCATCCTGATGACGAAGTGCTGGGTTGTGGCGGTTTAATGCAGC
AGCTAGTCGAGCAAAACTGCCATATTGTCATTTTGGCAGTCAGTAATGGAACACAAAGCCATCCTCATTCAGTGAAATAT
ACTCCTGACCAATTGAACGATTTACGTCCGCAAGAAACACTGGCTGCTTTAAACACTTTAGGTATTTCAGCTTTTTCTGA
ACGGATTGGTTTAAATCTAATGGATGGTCAAATTCATTTACAGACTGATCAATTGAATCAGGCGCTTAGCCAAATAGTTC
AGCCCCAAGATATTTTAATTTGTAGCTATGCACTTGATGGCCATCCAGATCATGAGGCTGTCGGGAAAACAGTACAAGCT
TTTGCCGAAGCTCGGAACTTACTATGTTTGCATGTATTGATCTGGGCATGGCATTGGGCAGAGCCTTTTGACACGCGAAT
TAACTGGTCCAAAGCAAAAGCTTATGCCTTAACTGAAAACCAGTTAATTAAAAAACATCAGGCGGTTATGCAATTTAAAA
CACAACTTGAAGCCGATGAGAGCACAGGAAATTCCGCCGTTTTATCCTCAAGTGCGATTAGCCGTCTTTTAATGCCTTAT
GAGGTATATCTGAGTGATTCATTCTCGTGTGTATTTTGA

Upstream 100 bases:

>100_bases
GACAGAGCCATGCGGCTTTTGATTATGAGTCTATTGCTGAGCTCTGTTTACCGGAGAAAAGCTTATGGGAACTTTGAAGC
ATCCCTTAGTAGAGGACCGT

Downstream 100 bases:

>100_bases
AGAGTTGTATCGTAGTAATAATGACCCGTGGGGCTATGACTATCACTGGTATGAAGCCCGTAAAAGACAAATCTGCCTTG
CATTATTAACGCGACCACAC

Product: LmbE-like protein

Products: NA

Alternate protein names: LmbE-Like Protein; LmbE Protein; Gpi Deacetylase; GlcNAc-PI De-N-Acetylase Family Protein; Acyl-CoA Dehydrogenase/Methyltransferase; N-Acetylglucosaminylphosphatidylinositol Deacetylase; GlcNAc-PI De-N-Acetylase

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MISGEGTPEFMWLEAFKKNPLDRLNLKLFQSKRVVIVAPHPDDEVLGCGGLMQQLVEQNCHIVILAVSNGTQSHPHSVKY
TPDQLNDLRPQETLAALNTLGISAFSERIGLNLMDGQIHLQTDQLNQALSQIVQPQDILICSYALDGHPDHEAVGKTVQA
FAEARNLLCLHVLIWAWHWAEPFDTRINWSKAKAYALTENQLIKKHQAVMQFKTQLEADESTGNSAVLSSSAISRLLMPY
EVYLSDSFSCVF

Sequences:

>Translated_252_residues
MISGEGTPEFMWLEAFKKNPLDRLNLKLFQSKRVVIVAPHPDDEVLGCGGLMQQLVEQNCHIVILAVSNGTQSHPHSVKY
TPDQLNDLRPQETLAALNTLGISAFSERIGLNLMDGQIHLQTDQLNQALSQIVQPQDILICSYALDGHPDHEAVGKTVQA
FAEARNLLCLHVLIWAWHWAEPFDTRINWSKAKAYALTENQLIKKHQAVMQFKTQLEADESTGNSAVLSSSAISRLLMPY
EVYLSDSFSCVF
>Mature_252_residues
MISGEGTPEFMWLEAFKKNPLDRLNLKLFQSKRVVIVAPHPDDEVLGCGGLMQQLVEQNCHIVILAVSNGTQSHPHSVKY
TPDQLNDLRPQETLAALNTLGISAFSERIGLNLMDGQIHLQTDQLNQALSQIVQPQDILICSYALDGHPDHEAVGKTVQA
FAEARNLLCLHVLIWAWHWAEPFDTRINWSKAKAYALTENQLIKKHQAVMQFKTQLEADESTGNSAVLSSSAISRLLMPY
EVYLSDSFSCVF

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28179; Mature: 28179

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGEGTPEFMWLEAFKKNPLDRLNLKLFQSKRVVIVAPHPDDEVLGCGGLMQQLVEQNC
CCCCCCCCCHHHHHHHHCCCHHHHHHEEECCCCEEEEECCCCCCEECCHHHHHHHHHCCC
HIVILAVSNGTQSHPHSVKYTPDQLNDLRPQETLAALNTLGISAFSERIGLNLMDGQIHL
CEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEEE
QTDQLNQALSQIVQPQDILICSYALDGHPDHEAVGKTVQAFAEARNLLCLHVLIWAWHWA
EHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPFDTRINWSKAKAYALTENQLIKKHQAVMQFKTQLEADESTGNSAVLSSSAISRLLMPY
CCCCCCCCCCHHHEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCE
EVYLSDSFSCVF
EEEECCCCEECC
>Mature Secondary Structure
MISGEGTPEFMWLEAFKKNPLDRLNLKLFQSKRVVIVAPHPDDEVLGCGGLMQQLVEQNC
CCCCCCCCCHHHHHHHHCCCHHHHHHEEECCCCEEEEECCCCCCEECCHHHHHHHHHCCC
HIVILAVSNGTQSHPHSVKYTPDQLNDLRPQETLAALNTLGISAFSERIGLNLMDGQIHL
CEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEEE
QTDQLNQALSQIVQPQDILICSYALDGHPDHEAVGKTVQAFAEARNLLCLHVLIWAWHWA
EHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPFDTRINWSKAKAYALTENQLIKKHQAVMQFKTQLEADESTGNSAVLSSSAISRLLMPY
CCCCCCCCCCHHHEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCE
EVYLSDSFSCVF
EEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA