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The map label for this gene is yhcJ [H]

Identifier: 213158573

GI number: 213158573

Start: 2621768

End: 2622634

Strand: Direct

Name: yhcJ [H]

Synonym: AB57_2527

Alternate gene names: 213158573

Gene position: 2621768-2622634 (Clockwise)

Preceding gene: 213158572

Following gene: 213158574

Centisome position: 64.73

GC content: 38.18

Gene sequence:

>867_bases
ATGAAAAAGCTGATCAGTCTTTTTTTAAGCGTGTCTGTAGTATTACTTGCAGCTTGCGGCAAACAGCAAAATGAACCACA
AAATGGCAAAGACTCTGCTCAGTTACAAACTGTAGTCATTGCTTCAACTGGTTCTGACGCTGATATTTGGCGCTATATTG
CAACTTTACCGGAAACTAAAGCTGCCGGTCTTAAACTTGAGGTTAAAAACTTCACTGATTATGTTGCAATGAATACAGCT
ACTGCAAACAAAGAAGTTGACCTAAATGCATTCCAATCTTATGCCTACCTTGTTGCATTTAATGCTTCAAATAAAGATAA
GATTGCTCCTGTTGCTACAACTTATCTTGAACCAATGGGTATTTACTCGAGTAAATACAAAAAAGTTGATGAGTTCCCTC
AAGGTGCAAGCATTGCTATTCCTAATGATGCAGCGAACGAAGCTCGTGCATTGTTATTATTACAAAGCGCAGGTCTAATT
AAGCTTAAAGCTGACTTTGATCCAGCGAAAGGCACTCCAAGCGATATTACTGACAACAGCAAGAAAATTGATATCAAACC
AATTCAAATGGCAACTGCTGTTCGTGTAAAAGACGAAGTTGATGCAATTGTTTTAGGTAATACTTTAGCAATGGAAGGTG
GTTTAAATGTGCTTAAAGATTCTATCTATTATGAGCCAGTTGACCAAAGTACAAAGCTGAATGTAAATATTCTTGCAACT
GCTGAATCACGTAAAGATGACCCTGTTCTTCAGAAAGTTGGTCAGCTTTACCACACCGAAGCTGTTAAAAAATACGTTGA
ACAACACTTTGGTGGTACAAAAGTTGACGTGAATCAGCCAATCAGCTACCTCACGCAAGCTAAATAG

Upstream 100 bases:

>100_bases
TATGATTGGTTAAACCGTTGGAACTTTCAACATCACCAATTTTCCCAGCTGAGAGCCAACCCGAATGGTTGAGATCTCTC
ATAATCAGGACTTTTTTTAC

Downstream 100 bases:

>100_bases
TAATATAATAGCTGCAACGCGAAACAGGCAAAGACTCTTTGCCTGTTTTTTCTTTTTAGCATAGTTTTTGACGACATGAT
TCAATTTAAAAACATTTCAA

Product: ABC transporter, methionine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKLISLFLSVSVVLLAACGKQQNEPQNGKDSAQLQTVVIASTGSDADIWRYIATLPETKAAGLKLEVKNFTDYVAMNTA
TANKEVDLNAFQSYAYLVAFNASNKDKIAPVATTYLEPMGIYSSKYKKVDEFPQGASIAIPNDAANEARALLLLQSAGLI
KLKADFDPAKGTPSDITDNSKKIDIKPIQMATAVRVKDEVDAIVLGNTLAMEGGLNVLKDSIYYEPVDQSTKLNVNILAT
AESRKDDPVLQKVGQLYHTEAVKKYVEQHFGGTKVDVNQPISYLTQAK

Sequences:

>Translated_288_residues
MKKLISLFLSVSVVLLAACGKQQNEPQNGKDSAQLQTVVIASTGSDADIWRYIATLPETKAAGLKLEVKNFTDYVAMNTA
TANKEVDLNAFQSYAYLVAFNASNKDKIAPVATTYLEPMGIYSSKYKKVDEFPQGASIAIPNDAANEARALLLLQSAGLI
KLKADFDPAKGTPSDITDNSKKIDIKPIQMATAVRVKDEVDAIVLGNTLAMEGGLNVLKDSIYYEPVDQSTKLNVNILAT
AESRKDDPVLQKVGQLYHTEAVKKYVEQHFGGTKVDVNQPISYLTQAK
>Mature_288_residues
MKKLISLFLSVSVVLLAACGKQQNEPQNGKDSAQLQTVVIASTGSDADIWRYIATLPETKAAGLKLEVKNFTDYVAMNTA
TANKEVDLNAFQSYAYLVAFNASNKDKIAPVATTYLEPMGIYSSKYKKVDEFPQGASIAIPNDAANEARALLLLQSAGLI
KLKADFDPAKGTPSDITDNSKKIDIKPIQMATAVRVKDEVDAIVLGNTLAMEGGLNVLKDSIYYEPVDQSTKLNVNILAT
AESRKDDPVLQKVGQLYHTEAVKKYVEQHFGGTKVDVNQPISYLTQAK

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1790093, Length=254, Percent_Identity=33.8582677165354, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786396, Length=264, Percent_Identity=31.4393939393939, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 31294; Mature: 31294

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLISLFLSVSVVLLAACGKQQNEPQNGKDSAQLQTVVIASTGSDADIWRYIATLPETK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCC
AAGLKLEVKNFTDYVAMNTATANKEVDLNAFQSYAYLVAFNASNKDKIAPVATTYLEPMG
CCCEEEEECCCCCEEEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCC
IYSSKYKKVDEFPQGASIAIPNDAANEARALLLLQSAGLIKLKADFDPAKGTPSDITDNS
CHHHHHHHHHHCCCCCEEECCCCCCHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCCC
KKIDIKPIQMATAVRVKDEVDAIVLGNTLAMEGGLNVLKDSIYYEPVDQSTKLNVNILAT
CEEEEEEEEHEEEEEECCCCCEEEECCEEEECCCHHHHHHHHEECCCCCCCEEEEEEEEE
AESRKDDPVLQKVGQLYHTEAVKKYVEQHFGGTKVDVNQPISYLTQAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCC
>Mature Secondary Structure
MKKLISLFLSVSVVLLAACGKQQNEPQNGKDSAQLQTVVIASTGSDADIWRYIATLPETK
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCC
AAGLKLEVKNFTDYVAMNTATANKEVDLNAFQSYAYLVAFNASNKDKIAPVATTYLEPMG
CCCEEEEECCCCCEEEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCC
IYSSKYKKVDEFPQGASIAIPNDAANEARALLLLQSAGLIKLKADFDPAKGTPSDITDNS
CHHHHHHHHHHCCCCCEEECCCCCCHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCCC
KKIDIKPIQMATAVRVKDEVDAIVLGNTLAMEGGLNVLKDSIYYEPVDQSTKLNVNILAT
CEEEEEEEEHEEEEEECCCCCEEEECCEEEECCCHHHHHHHHEECCCCCCCEEEEEEEEE
AESRKDDPVLQKVGQLYHTEAVKKYVEQHFGGTKVDVNQPISYLTQAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]