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The map label for this gene is alr [H]

Identifier: 213158560

GI number: 213158560

Start: 2607089

End: 2608159

Strand: Direct

Name: alr [H]

Synonym: AB57_2513

Alternate gene names: 213158560

Gene position: 2607089-2608159 (Clockwise)

Preceding gene: 213158559

Following gene: 213158565

Centisome position: 64.36

GC content: 38.28

Gene sequence:

>1071_bases
GTGCGTCAAGCAACAGTTTATATTGATCGCCAAGCGCTTCAATATAATTTAAACCGTGTCAAACAACTCGCAGCAAATTC
AAAAATCGTAAGCATGGTAAAGGCCAATGCATACGGACATGGAGTCAAAGACTGTTTAGCAGCTTTAAATGCCTCAGATG
CCTTTGGTGTAGCCTGCCTACAAGAAGGATTAGAAATCCGTGAACTTGGTTTCGAACAACCAGTTACTTTAATTGAAGGG
GTATTTTCTGAAGATGAAATGCCCGTCGCAATTGAACAAAAATTTGAATGCGTCATTCACCATCAACAACAGTTTGAATG
GTTAATTAAACACAAACAAGCATATATTGCCCAAGGCTTAAAAGTATGGGTTAAATTAAATAGCGGTATGAACCGTTTAG
GTTTTAAAAACCCAGAAATTATTGAAGTGATTAAGACATTAAAGTCTGAAGGTTTTACATGTGTACTTGCTATGCATTTT
GCAAATGCAGATGTAGACCACCCTTTAAATGAACAACAAAAACAGCAATTTTTGCATATTAAAGAAACTTGCGATCCAAT
TTTAGCATCATGCTGTAATTCAGCTGCCATCTTTAAATGGCCAGAACTAAATTTTGACTATGTACGTCCTGGTATTATGC
TCTACGGCGCTTCACCTTTTGCAGATAAAACAGTGCATGATCTTGATTTGAAACCTGTCATGACTTTTACTGCAGAAATA
ATAGCGTTAAACCATATTAAAGCTGGTGAACATGTAGGTTATGGCTCTACTTTTTGTGCTCAACAGGCTATGGATATCGC
CATTGTTTCTATTGGCTATGGTGATGGCTATCCAAGAGCTTATGTTAAGCAAAATTTTGTCGCTATTGATAGCAAACTTT
GCCCAGTTGTGGGCCGTGTAAGTATGGATATGATTGCGATTGATGTCACAAATACTCAAGTAAAACTTGGCACCCAAGTT
GAACTTTGGGGAAATCACCGTCTAGTTGATGATGTGGCTGAAGCAAATGGTACAATCGGTTATGAATTACTTTGCCGTCT
AAGTTCTCGCCCAGTCCGTCAGGGTACTTAA

Upstream 100 bases:

>100_bases
AAGGCCAATATACTCGTTTTAGTAATCTCTCTCCTGAGTATTACAGCCAATATGATGATGAAGAATAAACTCTATCTCTA
GCCCAAAGGAGTAAATGAGG

Downstream 100 bases:

>100_bases
AGTTCACTAAATAAAAAATCCAAGCACTGCTTGGATTTTTTTGAATAAATTTTAGCGCCAATAATCATCTGTAGGTTTTG
GCATTTCCTGTAAACCACGG

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MRQATVYIDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNASDAFGVACLQEGLEIRELGFEQPVTLIEG
VFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVKLNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHF
ANADVDHPLNEQQKQQFLHIKETCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEI
IALNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDSKLCPVVGRVSMDMIAIDVTNTQVKLGTQV
ELWGNHRLVDDVAEANGTIGYELLCRLSSRPVRQGT

Sequences:

>Translated_356_residues
MRQATVYIDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNASDAFGVACLQEGLEIRELGFEQPVTLIEG
VFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVKLNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHF
ANADVDHPLNEQQKQQFLHIKETCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEI
IALNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDSKLCPVVGRVSMDMIAIDVTNTQVKLGTQV
ELWGNHRLVDDVAEANGTIGYELLCRLSSRPVRQGT
>Mature_356_residues
MRQATVYIDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNASDAFGVACLQEGLEIRELGFEQPVTLIEG
VFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVKLNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHF
ANADVDHPLNEQQKQQFLHIKETCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEI
IALNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDSKLCPVVGRVSMDMIAIDVTNTQVKLGTQV
ELWGNHRLVDDVAEANGTIGYELLCRLSSRPVRQGT

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=358, Percent_Identity=40.5027932960894, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1787439, Length=355, Percent_Identity=39.1549295774648, Blast_Score=254, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 39624; Mature: 39624

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQATVYIDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNASDAFGVACL
CCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHH
QEGLEIRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGL
HCCCHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
KVWVKLNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVDHPLNEQQKQQFLHI
EEEEEECCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
KETCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEI
HHHHHHHHHHHCCCCEEEECCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
IALNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDSKLCPVVGRV
HHEECCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCHHHHHCCEEEECCCCCHHHHCC
SMDMIAIDVTNTQVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSRPVRQGT
CEEEEEEEECCCEEEECCEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRQATVYIDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNASDAFGVACL
CCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHH
QEGLEIRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGL
HCCCHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
KVWVKLNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVDHPLNEQQKQQFLHI
EEEEEECCCCHHCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
KETCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEI
HHHHHHHHHHHCCCCEEEECCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
IALNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDSKLCPVVGRV
HHEECCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCHHHHHCCEEEECCCCCHHHHCC
SMDMIAIDVTNTQVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSRPVRQGT
CEEEEEEEECCCEEEECCEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA