| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is cyoB [H]
Identifier: 213158552
GI number: 213158552
Start: 2600314
End: 2602305
Strand: Direct
Name: cyoB [H]
Synonym: AB57_2505
Alternate gene names: 213158552
Gene position: 2600314-2602305 (Clockwise)
Preceding gene: 213158551
Following gene: 213158553
Centisome position: 64.2
GC content: 42.47
Gene sequence:
>1992_bases ATGGATATGATTTTTGGTAAATTGGGTTGGGACTCTATCCCGACAGAGCCAATCGTACTTGTCACCATGGTCTTTATGGC ACTTGGTGCAATTGCTGTGCTTGGCGGTATCACCTATTTCAAAAAATGGGGATATTTGTGGAAAGAATGGTTTACAACTG TAGACCATAAAAAAATTGGTATCATGTATATCATCGTATCTGTCGTCATGCTTTTGCGTGGTTTCGCCGATGCGATCATG ATGCGTTTACAACTTTTCCTCGCTAAAGGCGGTGGTGAAGGTTATTTACATCCTGACCATTACGACCAGATCTTCACCGC ACACGGTGTAATCATGATCTTCTTCGTAGCAATGGGTCTAGTTGTAGGTATGATGAACATCTCTGTACCTTTACAGATCG GTGCTCGTGACGTTGCTTTCCCATTATTAAACTCTTTAAGCTTCTGGTTATTCGCTGGTGCTGCTGGTTTAATGATGCTT TCACTTGTATTAGGTGAATTTGCTGCGACTGGTTGGATGGCTTACCCTCCTCTGTCTGGTATTCAATATTCTCCTGGTGT AGGTGTTGACTACTATATCTGGGCACTTCAGGTTTCTGGTCTAGGTACGCTTTTATCTGGTGTTAACTTCTTCGTTACCA TCATCAAAATGCGTGCGCCTGGCATGAAATTGATGGATATGCCTATTTTCACGTGGACTTCACTTTGTACGGCTGTATTA ATCATTGCATCTTTCCCTGTATTAACAGGTACTCTTGCGATGCTTACATTAGACCGTTACTTCGGTTTCCATTTCTTCAC AAATGAGCTTGGCGGTAGCCCAATGCTTTATGTGAACTTGATCTGGACATGGGGTCACCCTGAAGTATATATCTTGGTAT TACCAGCATTTGGTTTATACTCAGAAATCGTTGCAACCTTCTCTCGTAAAGCGTTGTTCGGTTACAAGTCTATGGTATAT GCAACAATTGCAATTACTGTATTAGCATTTGTTGTATGGCTTCACCACTTCTTCACCATGGGTGCTGGTGCGAACGTTAA CGCGTTCTTCGGTATCATGACCATGGTTATTGCGATTCCTACTGGTGTGAAAATCTTCTCTTGGTTATTCACCATGTATA AAGGTCGCATCACCTTTACTACTCCAATGTTATGGACGCTTGGCTTCCTTGTAACATTCGGTATCGGTGGTTTAACTGGT GTACTTATGGCTGTTCCACCTGCGGACTTCCTTGTACACAACTCATTATTCTTGATCGCTCACTTCCATAACGTAATTAT CGGTGGTGTGGTGTTTGGTATGTTTGCCGGCATCATTTACTACTGGCCAAAAATGTTTGGTTGGAAGCTCAATGAAGCAT GGGGTAAAGCTGCATTCTGGTTCTGGTTCTTCGGTTTCTATTTTGCATTCATGCCACTTTATATCCTTGGTTTCATGGGT ATGACTCGTCGTTTGAATACATATGACAACCCTGAATGGGACCCATACCTTGCGATTGCATTATTCGGTGCTGTTCTTGT TGCGATTGGTATTGCATGTTTCTTAATGCAAATCATCGTTGGTTTCTTACAACGTCACCAAAACATGGACTACACAGGCG ATCCATGGGATGCTCGTACACTTGAATGGGCTACTTCTTCCCCTGCTCCATTCTATAACTTTGCTCATGAACCAGATGCA AGCGGTATTGACCGTTTCTGGACTGACAAAGAGAACGGTGTAGCATACGCACGTAATACTAAATATGAAGACATCCACAT GCCGACTGATCGTGCTGCTGGTTTTGTCATTGCAATGTTCATTACTCTTCTTGGCTTTGCACTCATCTGGCATATTTGGT GGCTCGTTGTTGTTTCATTCGTTGCAGCTGTTGTTAGCTTGATCGTAAGCTCATTCACTAAGAATGTTGATTACTATGTT CCAGCTGCAGAAGTTGAGCGTATTGAAAACGAACGCTATGCTTTACTTGAAAAACACTTGAAGAAGGACTAA
Upstream 100 bases:
>100_bases CCACTATATGAGTAACTATCATGGTGCTGACCACTCTGCTGCACATACAGCAGCAGAAACTCATGTTGCAGCTGAACACG CTGCTCAAGGGGAATAAGAC
Downstream 100 bases:
>100_bases GGAAATGGCTGAAGTACTTCATCACGACAACCACGGCCATGATGGTCATCATGAACATGATGATACTGACTTAACGGTCT TTGGTTTCTGGACATACTTG
Product: cytochrome O ubiquinol oxidase, subunit I
Products: NA
Alternate protein names: Cytochrome o subunit 1; Cytochrome o ubiquinol oxidase subunit 1; Oxidase BO(3) subunit 1; Ubiquinol oxidase chain A; Ubiquinol oxidase polypeptide I [H]
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIGIMYIIVSVVMLLRGFADAIM MRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMML SLVLGEFAATGWMAYPPLSGIQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVL IIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSRKALFGYKSMVY ATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTG VLMAVPPADFLVHNSLFLIAHFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMG MTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDARTLEWATSSPAPFYNFAHEPDA SGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYV PAAEVERIENERYALLEKHLKKD
Sequences:
>Translated_663_residues MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIGIMYIIVSVVMLLRGFADAIM MRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMML SLVLGEFAATGWMAYPPLSGIQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVL IIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSRKALFGYKSMVY ATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTG VLMAVPPADFLVHNSLFLIAHFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMG MTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDARTLEWATSSPAPFYNFAHEPDA SGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYV PAAEVERIENERYALLEKHLKKD >Mature_663_residues MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIGIMYIIVSVVMLLRGFADAIM MRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMML SLVLGEFAATGWMAYPPLSGIQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVL IIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSRKALFGYKSMVY ATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTG VLMAVPPADFLVHNSLFLIAHFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMG MTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDARTLEWATSSPAPFYNFAHEPDA SGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYV PAAEVERIENERYALLEKHLKKD
Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration. This ubiquinol oxidase shows proton pump activity across the membrane in addition to the electron transfer [H]
COG id: COG0843
COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme-copper respiratory oxidase family [H]
Homologues:
Organism=Homo sapiens, GI251831109, Length=514, Percent_Identity=37.9377431906615, Blast_Score=320, Evalue=4e-87, Organism=Escherichia coli, GI1786634, Length=661, Percent_Identity=66.8683812405446, Blast_Score=915, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6226519, Length=464, Percent_Identity=40.301724137931, Blast_Score=336, Evalue=7e-93, Organism=Saccharomyces cerevisiae, GI6226524, Length=325, Percent_Identity=41.8461538461538, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6226523, Length=247, Percent_Identity=35.2226720647773, Blast_Score=138, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000883 - InterPro: IPR014207 [H]
Pfam domain/function: PF00115 COX1 [H]
EC number: 1.10.3.-
Molecular weight: Translated: 74543; Mature: 74543
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IMYIIVSVVMLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSG HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVL CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH IIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCHHHH SEIVATFSRKALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC TGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIA CCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCHHHHHH HFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDART HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE LEWATSSPAPFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMF EEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH ITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYALLEKHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHH KKD CCC >Mature Secondary Structure MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IMYIIVSVVMLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSG HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVL CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH IIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEECCHHHH SEIVATFSRKALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC TGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIA CCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCHHHHHH HFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDART HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE LEWATSSPAPFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMF EEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH ITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYALLEKHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHH KKD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Protoheme IX (Heme B55 and B562); Copper B. [C]
Metal ions: Fe; Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]