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The map label for this gene is ydhP [H]

Identifier: 213158508

GI number: 213158508

Start: 2544120

End: 2545268

Strand: Direct

Name: ydhP [H]

Synonym: AB57_2459

Alternate gene names: 213158508

Gene position: 2544120-2545268 (Clockwise)

Preceding gene: 213158504

Following gene: 213158515

Centisome position: 62.81

GC content: 43.17

Gene sequence:

>1149_bases
TTGGCAATTTTTTCTCTCGCAGTAGGCGGTTTCTGTATTGGCACTACAGAATTTGTCGCAATGGGTCTTATTCAGGAAAT
TGCACACAATTTAAAGATTACAGTACCTGAAGCAGGGCATTTTATTAGTGCTTATGCATTAGGTGTTGTTATTGGTGCCC
CTATTATTGCCATTTTGGGTGCCAAAGTACCTAGAAAGACCCTATTGCTTTGCCTCATGCTGTTTTATGGTATTGCCAAT
GCATGCACAGCTTTAGCACATACCCCAGAAACTGTTTTAGTCTCTCGTTTTATTGCAGGTTTACCTCATGGCGCATATTT
TGGTGTCGGCGCTTTAGTCGCGGCTGAACTAGCAGGCCCTTCACGAAGAGCTTCAGCAGTTGCGCAAATGATGATGGGAC
TAACCGTTGCTACCGTTATTGGCGTACCCTTAGCAACATGGTTAGGTCAACATTTTGGCTGGAGAGCAGGTTTTGAATTT
TCAGCAACGATCGCATTCTTTACTTTAATTGCTGTAGCTTGCTTTGTACCGAATATTCCAGTTCAAGCTACTGCCAGCAT
AAAAACAGAATTAGCTGGGCTTAAAAATATAAATATGTGGTTAACCCTTGCAGTCGGCGCAATTGGCTTTGGGGGCATGT
TCTCGGTATATAGCTATGTCTCACCAATTCTCACTGAATACACTAAAGTTAATATCCAGATCGTTCCTATTGCATTAGCG
CTGTGGGGCATTGGGATGGTGATTGGTGGTTTAGCTGCGGGTTGGCTTGCAGATAAAAATCTCAATAAAACTATTGTGGG
CGTACTCATTAGCTCAGCGATCGCATTTGTAGTCGCAAGCTTTCTAATGAGTAATATCTATAGCGCAATTGGCTCTTTAT
TCTTAATTGGCCTAACCGTTATGGGTTTAGGTGGGGCTTTACAGACACGCCTCATGGATGTTGCAGGTGATGCACAAACG
CTAGCAGCTTCACTTAACCATTCCGCCTTTAATCTTGCTAATGCATTAGGCGCTTTTTTAGGTGGTTGGGTACTGAGCCA
TCAGATGGGTTGGATTGCACCAATCTGGGTAGGTTTTGTACTGAGCCTTGGTGGCCTTATTATCTTACTCATTGCATTTG
CTGTAGAAAAAGCAACTCAAAAAGCCTGA

Upstream 100 bases:

>100_bases
CTCTTTTCCCTTATACTTTCTTTTTTGAGTTTCCTTTTATTAATTTATTATGGCGTCACCCCAATCCCCTTCTTCTTCCC
CTCGACATTACTCACTCTTC

Downstream 100 bases:

>100_bases
GTATGATCAGGCTTTCGTTGAATCTCTAATCTGTTAACTTTTCACCACAGTGCGGGCAATAACATTTTTTCTCTCTAACA
GCTTCTTTCTCTTCTAATAC

Product: MFS superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MAIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFISAYALGVVIGAPIIAILGAKVPRKTLLLCLMLFYGIAN
ACTALAHTPETVLVSRFIAGLPHGAYFGVGALVAAELAGPSRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEF
SATIAFFTLIAVACFVPNIPVQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPILTEYTKVNIQIVPIALA
LWGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLMSNIYSAIGSLFLIGLTVMGLGGALQTRLMDVAGDAQT
LAASLNHSAFNLANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKATQKA

Sequences:

>Translated_382_residues
MAIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFISAYALGVVIGAPIIAILGAKVPRKTLLLCLMLFYGIAN
ACTALAHTPETVLVSRFIAGLPHGAYFGVGALVAAELAGPSRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEF
SATIAFFTLIAVACFVPNIPVQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPILTEYTKVNIQIVPIALA
LWGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLMSNIYSAIGSLFLIGLTVMGLGGALQTRLMDVAGDAQT
LAASLNHSAFNLANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKATQKA
>Mature_381_residues
AIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFISAYALGVVIGAPIIAILGAKVPRKTLLLCLMLFYGIANA
CTALAHTPETVLVSRFIAGLPHGAYFGVGALVAAELAGPSRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEFS
ATIAFFTLIAVACFVPNIPVQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPILTEYTKVNIQIVPIALAL
WGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLMSNIYSAIGSLFLIGLTVMGLGGALQTRLMDVAGDAQTL
AASLNHSAFNLANALGAFLGGWVLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKATQKA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=379, Percent_Identity=37.7308707124011, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI1786595, Length=345, Percent_Identity=34.4927536231884, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1787808, Length=392, Percent_Identity=25.5102040816327, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI145693198, Length=379, Percent_Identity=21.3720316622691, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39699; Mature: 39568

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFISAYALGVVIGAPIIAILG
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHC
AKVPRKTLLLCLMLFYGIANACTALAHTPETVLVSRFIAGLPHGAYFGVGALVAAELAGP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
SRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEFSATIAFFTLIAVACFVPNIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
VQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPILTEYTKVNIQIVPIALA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEHHHHHH
LWGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLMSNIYSAIGSLFLIGLTV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLGGALQTRLMDVAGDAQTLAASLNHSAFNLANALGAFLGGWVLSHQMGWIAPIWVGFV
HHCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSLGGLIILLIAFAVEKATQKA
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFISAYALGVVIGAPIIAILG
CCHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHC
AKVPRKTLLLCLMLFYGIANACTALAHTPETVLVSRFIAGLPHGAYFGVGALVAAELAGP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
SRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEFSATIAFFTLIAVACFVPNIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
VQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPILTEYTKVNIQIVPIALA
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEEHHHHHH
LWGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLMSNIYSAIGSLFLIGLTV
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLGGALQTRLMDVAGDAQTLAASLNHSAFNLANALGAFLGGWVLSHQMGWIAPIWVGFV
HHCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSLGGLIILLIAFAVEKATQKA
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]