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The map label for this gene is ydiF [H]

Identifier: 213158447

GI number: 213158447

Start: 2483797

End: 2485380

Strand: Direct

Name: ydiF [H]

Synonym: AB57_2396

Alternate gene names: 213158447

Gene position: 2483797-2485380 (Clockwise)

Preceding gene: 213158446

Following gene: 213158449

Centisome position: 61.32

GC content: 36.81

Gene sequence:

>1584_bases
ATGACTCAGCAGGCATGTGTAATATCACAACTCACTTTGGAGTTTCCTTCAAAAGTGATGTTTAAAGAATTGAATTTCTC
ACTTGAGCATCATCAAGTATCAGCCTTAATTGGCCGCAATGGTCAAGGTAAGTCTTTACTAATGCAATTGCTTCAAAAGA
TTTCACCCACTACAGAAATGCATATAAGTGGTCAAATAAACTGGCAAACAAACCATGCATATTTATCTCAGCTCACTCGT
CTCCAATCAGACACAATTGCAGAAGCTTTAGAGGTCAACCATCTTTACAACGCTTTTCAAAGAGTAGAACAAGGTGAAGC
TCGATACGATGATTATGATTTGTTAGAAGGACATTGGGATCTTCCTAATATTTGGGAAGCTTTACTACGATCTGCTCAGC
TACCAACCGATTTAGACTTTCCTGTTAAGCAGTTAAGCGAAGGTCAAAAAACCAAGTTAGCCTTATCCGCATTATTTTTA
AAAACTGGTCATTACCTATTACTTGATGAGCCAAGCAACCATCTTGATCAAGAAGCTAGACAGTGGTTAATTGCTCAGTT
AAAGAAACATCCAGTAGGCGCTCTTATTATTAGTCATGATCTGACTTTGTTAAATGAAGTCGACCATATTTATCACTTAA
ATGAGCATGGCCTACAGCACACTACAGGAAATTATGAAAAATTTTATGAGCAATATCAGTCCCAAATCGAGGCTTTAGAA
CAGTCAGTACATCTGCATCAACGTGAAGTTAAGCACATGAAGCAAAAGCAGCATGAAGTTTTAATGAAAGCCCAAAAACG
TGAGCGTGCTGGCAACAAACTTCGTGACTCAAACTCGCAAGCTAAAATTTTGCTCGATTTTAAAAAAGAACAGGCTGGGC
AAAGCCTAGGAGCAATTCATTCTCAACATCAGCGTCAAATCGATCAAAGCCAGCAAGACTTGAAGAGTAAAAAAGTACTT
CTAGAAACTGTTAAGCCCCAACAATTTATATTCCCCTCTTTTCAAAAAAGAACAGGAGAAATTCTTAGAATTGATAACTT
AAAACTCAACTATGGGACACAACAACCAATTCATCTCGCCTTAAAAGCTTGTCAAAAGATTCATTTGGTTGGCCGAAATG
GTATTGGGAAATCAACTTTGCTGAAACAGATTGATCAATCTGCTGTAACTGCTACAGATGAAATTAAACTGTTTGTAAAT
TGCTTTTATCTCGACCAGAACTTCAGCTTTTTATTAGACCATCTCTCTGCTGTTGAAAACTTAAGAAATATTAACCCAAA
TATTTCTGAGTTAGAGTGGAGAAATATATTAGGTCAGCTTCGGATTCGTGGTGATAAAAGCACATATCCCTTAGCTCAAC
TCAGTGGTGGTGAGAAGTTAAAAGTTGCTTTACTAGGTTTGAGCCATGCTCAGCCTATGCCTGAACTTTTACTACTTGAT
GAACCAGAAAACCACTTAGATATCGAGTCAAGAGAGTTATTTGCAAATGCTATTTCTAGTTATGAAGGTGCTGTGCTATT
AGTTTCACATGATTTAAGTTTTGTTGAAAAATGTGGGATTGTTGATTCAATTTATTTAAATTAA

Upstream 100 bases:

>100_bases
TCTTTTTTGATGTGCAAAATAGACTATTCTTTAGTGACTTAGCGTCTTTATTTAAAGCTTTACATTCCTATTTTGTACAT
CCTGTATTTATGAGGTTCTT

Downstream 100 bases:

>100_bases
CACTACGCTATTTTTATGCCTATATAAAAGCTCTAACTATTAGAGCTTTTATATAAATCTTTTAATTATCATTTTATTTT
TTATTATCTAATATTTGTAG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MTQQACVISQLTLEFPSKVMFKELNFSLEHHQVSALIGRNGQGKSLLMQLLQKISPTTEMHISGQINWQTNHAYLSQLTR
LQSDTIAEALEVNHLYNAFQRVEQGEARYDDYDLLEGHWDLPNIWEALLRSAQLPTDLDFPVKQLSEGQKTKLALSALFL
KTGHYLLLDEPSNHLDQEARQWLIAQLKKHPVGALIISHDLTLLNEVDHIYHLNEHGLQHTTGNYEKFYEQYQSQIEALE
QSVHLHQREVKHMKQKQHEVLMKAQKRERAGNKLRDSNSQAKILLDFKKEQAGQSLGAIHSQHQRQIDQSQQDLKSKKVL
LETVKPQQFIFPSFQKRTGEILRIDNLKLNYGTQQPIHLALKACQKIHLVGRNGIGKSTLLKQIDQSAVTATDEIKLFVN
CFYLDQNFSFLLDHLSAVENLRNINPNISELEWRNILGQLRIRGDKSTYPLAQLSGGEKLKVALLGLSHAQPMPELLLLD
EPENHLDIESRELFANAISSYEGAVLLVSHDLSFVEKCGIVDSIYLN

Sequences:

>Translated_527_residues
MTQQACVISQLTLEFPSKVMFKELNFSLEHHQVSALIGRNGQGKSLLMQLLQKISPTTEMHISGQINWQTNHAYLSQLTR
LQSDTIAEALEVNHLYNAFQRVEQGEARYDDYDLLEGHWDLPNIWEALLRSAQLPTDLDFPVKQLSEGQKTKLALSALFL
KTGHYLLLDEPSNHLDQEARQWLIAQLKKHPVGALIISHDLTLLNEVDHIYHLNEHGLQHTTGNYEKFYEQYQSQIEALE
QSVHLHQREVKHMKQKQHEVLMKAQKRERAGNKLRDSNSQAKILLDFKKEQAGQSLGAIHSQHQRQIDQSQQDLKSKKVL
LETVKPQQFIFPSFQKRTGEILRIDNLKLNYGTQQPIHLALKACQKIHLVGRNGIGKSTLLKQIDQSAVTATDEIKLFVN
CFYLDQNFSFLLDHLSAVENLRNINPNISELEWRNILGQLRIRGDKSTYPLAQLSGGEKLKVALLGLSHAQPMPELLLLD
EPENHLDIESRELFANAISSYEGAVLLVSHDLSFVEKCGIVDSIYLN
>Mature_526_residues
TQQACVISQLTLEFPSKVMFKELNFSLEHHQVSALIGRNGQGKSLLMQLLQKISPTTEMHISGQINWQTNHAYLSQLTRL
QSDTIAEALEVNHLYNAFQRVEQGEARYDDYDLLEGHWDLPNIWEALLRSAQLPTDLDFPVKQLSEGQKTKLALSALFLK
TGHYLLLDEPSNHLDQEARQWLIAQLKKHPVGALIISHDLTLLNEVDHIYHLNEHGLQHTTGNYEKFYEQYQSQIEALEQ
SVHLHQREVKHMKQKQHEVLMKAQKRERAGNKLRDSNSQAKILLDFKKEQAGQSLGAIHSQHQRQIDQSQQDLKSKKVLL
ETVKPQQFIFPSFQKRTGEILRIDNLKLNYGTQQPIHLALKACQKIHLVGRNGIGKSTLLKQIDQSAVTATDEIKLFVNC
FYLDQNFSFLLDHLSAVENLRNINPNISELEWRNILGQLRIRGDKSTYPLAQLSGGEKLKVALLGLSHAQPMPELLLLDE
PENHLDIESRELFANAISSYEGAVLLVSHDLSFVEKCGIVDSIYLN

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=536, Percent_Identity=29.1044776119403, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=26.0550458715596, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=26.2385321100917, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI10947135, Length=387, Percent_Identity=28.9405684754522, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI69354671, Length=387, Percent_Identity=28.9405684754522, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI42741659, Length=235, Percent_Identity=27.2340425531915, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1789751, Length=539, Percent_Identity=27.8293135435993, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI2367384, Length=536, Percent_Identity=26.1194029850746, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1787041, Length=544, Percent_Identity=27.0220588235294, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787182, Length=547, Percent_Identity=26.691042047532, Blast_Score=113, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=28.8135593220339, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=27.2380952380952, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=26.8382352941176, Blast_Score=125, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6320874, Length=552, Percent_Identity=27.536231884058, Blast_Score=133, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=25.2767527675277, Blast_Score=117, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=238, Percent_Identity=24.3697478991597, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642252, Length=539, Percent_Identity=28.3858998144712, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI18859989, Length=539, Percent_Identity=28.3858998144712, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24666836, Length=544, Percent_Identity=28.8602941176471, Blast_Score=152, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24641342, Length=553, Percent_Identity=26.5822784810127, Blast_Score=137, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60229; Mature: 60097

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQACVISQLTLEFPSKVMFKELNFSLEHHQVSALIGRNGQGKSLLMQLLQKISPTTEM
CCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEE
HISGQINWQTNHAYLSQLTRLQSDTIAEALEVNHLYNAFQRVEQGEARYDDYDLLEGHWD
EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC
LPNIWEALLRSAQLPTDLDFPVKQLSEGQKTKLALSALFLKTGHYLLLDEPSNHLDQEAR
CHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
QWLIAQLKKHPVGALIISHDLTLLNEVDHIYHLNEHGLQHTTGNYEKFYEQYQSQIEALE
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
QSVHLHQREVKHMKQKQHEVLMKAQKRERAGNKLRDSNSQAKILLDFKKEQAGQSLGAIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHCHHHHHHH
SQHQRQIDQSQQDLKSKKVLLETVKPQQFIFPSFQKRTGEILRIDNLKLNYGTQQPIHLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCEEEEECEEECCCCCCHHHHH
LKACQKIHLVGRNGIGKSTLLKQIDQSAVTATDEIKLFVNCFYLDQNFSFLLDHLSAVEN
HHHHHHEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEEEEEEECCCHHHHHHHHHHHHH
LRNINPNISELEWRNILGQLRIRGDKSTYPLAQLSGGEKLKVALLGLSHAQPMPELLLLD
HHCCCCCHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCEEEEEEEECCCCCCCCCEEEEC
EPENHLDIESRELFANAISSYEGAVLLVSHDLSFVEKCGIVDSIYLN
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCEEECC
>Mature Secondary Structure 
TQQACVISQLTLEFPSKVMFKELNFSLEHHQVSALIGRNGQGKSLLMQLLQKISPTTEM
CCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEE
HISGQINWQTNHAYLSQLTRLQSDTIAEALEVNHLYNAFQRVEQGEARYDDYDLLEGHWD
EEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCC
LPNIWEALLRSAQLPTDLDFPVKQLSEGQKTKLALSALFLKTGHYLLLDEPSNHLDQEAR
CHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
QWLIAQLKKHPVGALIISHDLTLLNEVDHIYHLNEHGLQHTTGNYEKFYEQYQSQIEALE
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
QSVHLHQREVKHMKQKQHEVLMKAQKRERAGNKLRDSNSQAKILLDFKKEQAGQSLGAIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHCHHHHHHH
SQHQRQIDQSQQDLKSKKVLLETVKPQQFIFPSFQKRTGEILRIDNLKLNYGTQQPIHLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCEEEEECEEECCCCCCHHHHH
LKACQKIHLVGRNGIGKSTLLKQIDQSAVTATDEIKLFVNCFYLDQNFSFLLDHLSAVEN
HHHHHHEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEEEEEEECCCHHHHHHHHHHHHH
LRNINPNISELEWRNILGQLRIRGDKSTYPLAQLSGGEKLKVALLGLSHAQPMPELLLLD
HHCCCCCHHHHHHHHHHHHEEECCCCCCCCHHHCCCCCEEEEEEEECCCCCCCCCEEEEC
EPENHLDIESRELFANAISSYEGAVLLVSHDLSFVEKCGIVDSIYLN
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]