| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is 213158418
Identifier: 213158418
GI number: 213158418
Start: 2449910
End: 2450635
Strand: Direct
Name: 213158418
Synonym: AB57_2367
Alternate gene names: NA
Gene position: 2449910-2450635 (Clockwise)
Preceding gene: 213158417
Following gene: 213158419
Centisome position: 60.48
GC content: 37.88
Gene sequence:
>726_bases TTGTTCATTGCGATTACTGGTCTTACATGGTCTCAATGGGCTGGTGATAATATTCGTATTGCCCGTCAATGGTTAAACTG GCAAACACCAACATTGACGACCTCACTAAATCAGATTTCATTGCCAGAAATGGCTCATCATGAACATCACGAAATGATCA TGGAAACGCCAAATTTAGACATCATGCCAGCTGAATTCGATTCTGTATTAGCAATTGCTCGAGCAAATGGGATTAATTCA ACAGAAATACAAATCAAACCGCCAGTTGCTGAGAACCAAGCTTGGACTGTTGCGGAAATACAGCGTAAATGGCCCACACA AGCAGATAGTATTGCGATTGATATGCATGAACACAAGGTAATCGATAAACTCGCTTTTAAAGATTATTCATTAGTTGCAA AACTTACACGCTGGGGAGTTGATGCACATATTGGGGTACTATTCGGTTGGGTCAATCAATTAATTCTGATTCTGTATGCG CTCGGGCTATGTGTAATGATTGTTTATGCGTATAAAGCTTGGTTTAAAACCTCCGATGTAAAACTTACGACCCATCATTT TATTAACCAAACTTTGTTCGTATGGAAACATGCAACTACACAACAAAGAATAATTACGACATTAATGCTTGCTATTCTAG GGCTGAGTTTACCTATTTTTGGATTTAGCTTAGTCATCACCTTATTTATTTTGCTCATAAAAAAACAGCTCCCTCTTAAA GTTTAA
Upstream 100 bases:
>100_bases TTGGTGGAAGCATCGCTCAAACTTCAAAAACAGACAAACAAATAAAAATCACTTATTAAAATGGCATAGTTCTATTGGGT TAGCTTTACTACCACTTTTA
Downstream 100 bases:
>100_bases TAAAGCTCTGATCTTCGCCAACTCATCAGCTTCTCGTATTAGGGAGATGATCAGTTGGTAAAAGATTAAATGAATAAAAT ACCGGTTAAACAATTCCGTA
Product: PepSY-associated TM helix domain protein
Products: NA
Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family Protein; Conserved Iron-Regulated Membrane Protein; PepSY-Associated TM Helix; Peptidase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MFIAITGLTWSQWAGDNIRIARQWLNWQTPTLTTSLNQISLPEMAHHEHHEMIMETPNLDIMPAEFDSVLAIARANGINS TEIQIKPPVAENQAWTVAEIQRKWPTQADSIAIDMHEHKVIDKLAFKDYSLVAKLTRWGVDAHIGVLFGWVNQLILILYA LGLCVMIVYAYKAWFKTSDVKLTTHHFINQTLFVWKHATTQQRIITTLMLAILGLSLPIFGFSLVITLFILLIKKQLPLK V
Sequences:
>Translated_241_residues MFIAITGLTWSQWAGDNIRIARQWLNWQTPTLTTSLNQISLPEMAHHEHHEMIMETPNLDIMPAEFDSVLAIARANGINS TEIQIKPPVAENQAWTVAEIQRKWPTQADSIAIDMHEHKVIDKLAFKDYSLVAKLTRWGVDAHIGVLFGWVNQLILILYA LGLCVMIVYAYKAWFKTSDVKLTTHHFINQTLFVWKHATTQQRIITTLMLAILGLSLPIFGFSLVITLFILLIKKQLPLK V >Mature_241_residues MFIAITGLTWSQWAGDNIRIARQWLNWQTPTLTTSLNQISLPEMAHHEHHEMIMETPNLDIMPAEFDSVLAIARANGINS TEIQIKPPVAENQAWTVAEIQRKWPTQADSIAIDMHEHKVIDKLAFKDYSLVAKLTRWGVDAHIGVLFGWVNQLILILYA LGLCVMIVYAYKAWFKTSDVKLTTHHFINQTLFVWKHATTQQRIITTLMLAILGLSLPIFGFSLVITLFILLIKKQLPLK V
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27521; Mature: 27521
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIAITGLTWSQWAGDNIRIARQWLNWQTPTLTTSLNQISLPEMAHHEHHEMIMETPNLD CEEEEECCCHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCC IMPAEFDSVLAIARANGINSTEIQIKPPVAENQAWTVAEIQRKWPTQADSIAIDMHEHKV EECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHH IDKLAFKDYSLVAKLTRWGVDAHIGVLFGWVNQLILILYALGLCVMIVYAYKAWFKTSDV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE KLTTHHFINQTLFVWKHATTQQRIITTLMLAILGLSLPIFGFSLVITLFILLIKKQLPLK EEHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC V C >Mature Secondary Structure MFIAITGLTWSQWAGDNIRIARQWLNWQTPTLTTSLNQISLPEMAHHEHHEMIMETPNLD CEEEEECCCHHHCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCC IMPAEFDSVLAIARANGINSTEIQIKPPVAENQAWTVAEIQRKWPTQADSIAIDMHEHKV EECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEHHHHHH IDKLAFKDYSLVAKLTRWGVDAHIGVLFGWVNQLILILYALGLCVMIVYAYKAWFKTSDV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE KLTTHHFINQTLFVWKHATTQQRIITTLMLAILGLSLPIFGFSLVITLFILLIKKQLPLK EEHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA