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The map label for this gene is dadA3 [H]

Identifier: 213158383

GI number: 213158383

Start: 2413443

End: 2414687

Strand: Reverse

Name: dadA3 [H]

Synonym: AB57_2330

Alternate gene names: 213158383

Gene position: 2414687-2413443 (Counterclockwise)

Preceding gene: 213158384

Following gene: 213158380

Centisome position: 59.61

GC content: 40.08

Gene sequence:

>1245_bases
ATGCCACATGTTATTGTGATTGGTGCAGGAATCACAGGGGTTACTTCAGCCTATGAATTATCTCAATTAGGTTACCAAGT
CACAGTGATTGATCGCCATCTTTATCCAGCTATGGAAACATCATTTGCAAATGGAGGGCAATTATCTGCTTGTAATGCAG
AAGTCTGGAACCAGAAAGCGACCGTTATAAAAGGTTTTAAATGGATGAGGCAAAAAGATGCTCCTTTATTATTGAATCCT
TCCTTTAGCCTACATAAATATAGTTGGTTGGTTGAGTTTTTGTCTCATATTAAAAATTATGAAGCCAACACAATAGAAAC
CGTTCGCTTGGCATTGCTTGCGCGTAAGCGCTTGTTTGACGTAGCTGAAAAAGAGCAGCTTCAATTTGATTTGGAGAAAC
GCGGTATTCTTCATATGTATCATACTAAGGATGATTATGACATCGCCAAGCGAGTTAATGATGTTTTAAATAAAGGGACT
TTAGAACGTTACTCGGTTTCACCTGAGGAAATGAAATCAATCGAACCTTCTTTAACGGGTGAGTACTTTGGTGGTTATTA
CACACCAAGCGATGCAACCGGTGATATCCATAAATATTCAACCTCTTTAGCTGAAAAGACTAAACAATATGGCGTTCAGT
ACAAATTCGGTTTGGAAGTTACTGATATTAAGTGTCATGCAGATAAAGTGGTACTGAATTGTCAGCCAAGTGCTGAGCAT
CCGCATCTTTCCCAAACAGACAGCTTTCAATTAGAAGGTGATGTTCTGGTGGTTTGTGGTGGTGTAGGGAGTTATCAATT
GGCTGACATGATTGGTGAGCGTGTAAATGTTTATCCTGTGAAAGGTTATTCGATTACTGTCCAATTGAAAGATGAGAAAA
GCGTTAAAAATGCGCCGTGGGTAAGTTTGCTTGATGAGAGTGCCAAAATTGTAACCTCTCGTTTAGGACCAGATCGTTTA
CGTGTAGCAGGTACAGCTGAGTTTAATGGTTACAATCGTGACATTCGTGCAGATCGTATTCAGCCTTTAGTTAATTGGGT
GAACCGCAATTTTGACATTTCAACTGAGCATGTTGTGCCTTGGGCTGGTTTAAGGCCAATGATGCCTAATATGTTGCCAG
TTGTGAAACAGTCTAAACAGTCTCGAGTTTTCTATAATACGGGACATGGTCATCTAGGCTGGACTTTGTCAGCAGCTACA
GCTGTTTTGGTGAGTCAAGACATTCAACAAAAGTATCCCGCATAA

Upstream 100 bases:

>100_bases
ATCGAAATACTAAAAGGTAGTATTTAGGTCGAAACTCTCAGGTACAAATGACAGATGGGCTATACTGATGAAATGTTCTT
GCATTTCAGAGGAGTCTGTT

Downstream 100 bases:

>100_bases
AAAGAAAAGCCAGTGTCTATGCACTGGCTTTTTTATTTTATATTCACTAGTCGTACAGGCGATAAATTCCTGTGAAGCGC
TCACAACCTTTTTGCTGGGT

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MPHVIVIGAGITGVTSAYELSQLGYQVTVIDRHLYPAMETSFANGGQLSACNAEVWNQKATVIKGFKWMRQKDAPLLLNP
SFSLHKYSWLVEFLSHIKNYEANTIETVRLALLARKRLFDVAEKEQLQFDLEKRGILHMYHTKDDYDIAKRVNDVLNKGT
LERYSVSPEEMKSIEPSLTGEYFGGYYTPSDATGDIHKYSTSLAEKTKQYGVQYKFGLEVTDIKCHADKVVLNCQPSAEH
PHLSQTDSFQLEGDVLVVCGGVGSYQLADMIGERVNVYPVKGYSITVQLKDEKSVKNAPWVSLLDESAKIVTSRLGPDRL
RVAGTAEFNGYNRDIRADRIQPLVNWVNRNFDISTEHVVPWAGLRPMMPNMLPVVKQSKQSRVFYNTGHGHLGWTLSAAT
AVLVSQDIQQKYPA

Sequences:

>Translated_414_residues
MPHVIVIGAGITGVTSAYELSQLGYQVTVIDRHLYPAMETSFANGGQLSACNAEVWNQKATVIKGFKWMRQKDAPLLLNP
SFSLHKYSWLVEFLSHIKNYEANTIETVRLALLARKRLFDVAEKEQLQFDLEKRGILHMYHTKDDYDIAKRVNDVLNKGT
LERYSVSPEEMKSIEPSLTGEYFGGYYTPSDATGDIHKYSTSLAEKTKQYGVQYKFGLEVTDIKCHADKVVLNCQPSAEH
PHLSQTDSFQLEGDVLVVCGGVGSYQLADMIGERVNVYPVKGYSITVQLKDEKSVKNAPWVSLLDESAKIVTSRLGPDRL
RVAGTAEFNGYNRDIRADRIQPLVNWVNRNFDISTEHVVPWAGLRPMMPNMLPVVKQSKQSRVFYNTGHGHLGWTLSAAT
AVLVSQDIQQKYPA
>Mature_413_residues
PHVIVIGAGITGVTSAYELSQLGYQVTVIDRHLYPAMETSFANGGQLSACNAEVWNQKATVIKGFKWMRQKDAPLLLNPS
FSLHKYSWLVEFLSHIKNYEANTIETVRLALLARKRLFDVAEKEQLQFDLEKRGILHMYHTKDDYDIAKRVNDVLNKGTL
ERYSVSPEEMKSIEPSLTGEYFGGYYTPSDATGDIHKYSTSLAEKTKQYGVQYKFGLEVTDIKCHADKVVLNCQPSAEHP
HLSQTDSFQLEGDVLVVCGGVGSYQLADMIGERVNVYPVKGYSITVQLKDEKSVKNAPWVSLLDESAKIVTSRLGPDRLR
VAGTAEFNGYNRDIRADRIQPLVNWVNRNFDISTEHVVPWAGLRPMMPNMLPVVKQSKQSRVFYNTGHGHLGWTLSAATA
VLVSQDIQQKYPA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=422, Percent_Identity=31.7535545023697, Blast_Score=208, Evalue=6e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46521; Mature: 46390

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVIVIGAGITGVTSAYELSQLGYQVTVIDRHLYPAMETSFANGGQLSACNAEVWNQKA
CCEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCCCEEECCHHHHCCHH
TVIKGFKWMRQKDAPLLLNPSFSLHKYSWLVEFLSHIKNYEANTIETVRLALLARKRLFD
HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VAEKEQLQFDLEKRGILHMYHTKDDYDIAKRVNDVLNKGTLERYSVSPEEMKSIEPSLTG
HHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHCCCCHHHHHHCCCCCCH
EYFGGYYTPSDATGDIHKYSTSLAEKTKQYGVQYKFGLEVTDIKCHADKVVLNCQPSAEH
HCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCEEEEECCCCCCC
PHLSQTDSFQLEGDVLVVCGGVGSYQLADMIGERVNVYPVKGYSITVQLKDEKSVKNAPW
CCCCCCCCEEECCCEEEEECCCCCHHHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCCC
VSLLDESAKIVTSRLGPDRLRVAGTAEFNGYNRDIRADRIQPLVNWVNRNFDISTEHVVP
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
WAGLRPMMPNMLPVVKQSKQSRVFYNTGHGHLGWTLSAATAVLVSQDIQQKYPA
CCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PHVIVIGAGITGVTSAYELSQLGYQVTVIDRHLYPAMETSFANGGQLSACNAEVWNQKA
CEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHCCCCCCCEEECCHHHHCCHH
TVIKGFKWMRQKDAPLLLNPSFSLHKYSWLVEFLSHIKNYEANTIETVRLALLARKRLFD
HHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VAEKEQLQFDLEKRGILHMYHTKDDYDIAKRVNDVLNKGTLERYSVSPEEMKSIEPSLTG
HHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHCCCCHHHHHHCCCCCCH
EYFGGYYTPSDATGDIHKYSTSLAEKTKQYGVQYKFGLEVTDIKCHADKVVLNCQPSAEH
HCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCEEEEECCCCCCC
PHLSQTDSFQLEGDVLVVCGGVGSYQLADMIGERVNVYPVKGYSITVQLKDEKSVKNAPW
CCCCCCCCEEECCCEEEEECCCCCHHHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCCC
VSLLDESAKIVTSRLGPDRLRVAGTAEFNGYNRDIRADRIQPLVNWVNRNFDISTEHVVP
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
WAGLRPMMPNMLPVVKQSKQSRVFYNTGHGHLGWTLSAATAVLVSQDIQQKYPA
CCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]