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The map label for this gene is fdhD [H]

Identifier: 213158325

GI number: 213158325

Start: 3147276

End: 3148067

Strand: Reverse

Name: fdhD [H]

Synonym: AB57_3053

Alternate gene names: 213158325

Gene position: 3148067-3147276 (Counterclockwise)

Preceding gene: 213158326

Following gene: 213158324

Centisome position: 77.72

GC content: 42.93

Gene sequence:

>792_bases
TTGACACCACATGCTTATGGGGTTGAAACATTGCCAGTACAGCGGTTTAACAAAACCGAATCTGAAAATGTCTTAGATCA
TATTGTGCAAGAGTACCCAATTGCCTTGGTATATAACGGTATTTCACATGCGGTGATGATGGCGACACCGACCGATGTCG
ATTTATTTGCTAAAGGTTTTAGTCTCTCGGAAGGAATTTTAACCAGCTTAAAAGAGCTATATACCCTTGATGTGCATCAA
AATGAACTAGGCATTACGGTGGAAATGACCATTTCATCGAGAGCATTTGCCGCCCTAAAGGAACATCGCCGTATGATGGT
AGGCCGTACAGGCTGCGGTTTATGTGGAATTGAAAGCTTAGAGCAGTTTCAGTTAGACGTGCCAAAAATTACAACGCATG
CATCAAAAATATGGCTTGAGCAAATTCCGAGTGCTATTTCCCATTTAAAAACTCAACAAGAAATTACTGCTTTAACGGGT
GGGGCGCATGCCGCAGCATGGGTAGTTGACGGTCAAATCGTGGCTTTATTTGAAGATGTTGGCCGCCATAATGCCTTAGA
CAAATTGCTCGGTTATTTAGCGCAAGAAAATTACGACACCAGTTTGGGTTTTGTGGTGATGACCAGTCGGGCAAGTTATG
AACTGATACGAAAATGTGCTCAGCTCAATATTGGCTTGCTTGCTTCAATTTCAGCGCCTACCAGTATGGCCATTCAGTTA
GCCAAGCAATCGGGCCTGACTTTGGCAAGCTTTTGTAGGGGCGATGGATTTGTTTTATATACGGAAATATAA

Upstream 100 bases:

>100_bases
TAAGAAAGTTAGCAGTCTTTAAGTGAATCTGATTTTTTAAAATGAAATTTAAGCAAATGGCGCTCTAAACAAGCGCCATT
TTGAAATAAAGGAAATAATT

Downstream 100 bases:

>100_bases
AATATATCTTTTAATGTGAAGGAATTAGGGCTGGGTTCATTCGATATTCCTTTCACTTTTAAGCTAAGGTTAGTTTTTAT
AGATTATTATAAAATTCTAA

Product: formate dehydrogenase accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTPHAYGVETLPVQRFNKTESENVLDHIVQEYPIALVYNGISHAVMMATPTDVDLFAKGFSLSEGILTSLKELYTLDVHQ
NELGITVEMTISSRAFAALKEHRRMMVGRTGCGLCGIESLEQFQLDVPKITTHASKIWLEQIPSAISHLKTQQEITALTG
GAHAAAWVVDGQIVALFEDVGRHNALDKLLGYLAQENYDTSLGFVVMTSRASYELIRKCAQLNIGLLASISAPTSMAIQL
AKQSGLTLASFCRGDGFVLYTEI

Sequences:

>Translated_263_residues
MTPHAYGVETLPVQRFNKTESENVLDHIVQEYPIALVYNGISHAVMMATPTDVDLFAKGFSLSEGILTSLKELYTLDVHQ
NELGITVEMTISSRAFAALKEHRRMMVGRTGCGLCGIESLEQFQLDVPKITTHASKIWLEQIPSAISHLKTQQEITALTG
GAHAAAWVVDGQIVALFEDVGRHNALDKLLGYLAQENYDTSLGFVVMTSRASYELIRKCAQLNIGLLASISAPTSMAIQL
AKQSGLTLASFCRGDGFVLYTEI
>Mature_262_residues
TPHAYGVETLPVQRFNKTESENVLDHIVQEYPIALVYNGISHAVMMATPTDVDLFAKGFSLSEGILTSLKELYTLDVHQN
ELGITVEMTISSRAFAALKEHRRMMVGRTGCGLCGIESLEQFQLDVPKITTHASKIWLEQIPSAISHLKTQQEITALTGG
AHAAAWVVDGQIVALFEDVGRHNALDKLLGYLAQENYDTSLGFVVMTSRASYELIRKCAQLNIGLLASISAPTSMAIQLA
KQSGLTLASFCRGDGFVLYTEI

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=238, Percent_Identity=44.9579831932773, Blast_Score=211, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28761; Mature: 28630

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPHAYGVETLPVQRFNKTESENVLDHIVQEYPIALVYNGISHAVMMATPTDVDLFAKGF
CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCHHHHHCCC
SLSEGILTSLKELYTLDVHQNELGITVEMTISSRAFAALKEHRRMMVGRTGCGLCGIESL
CCHHHHHHHHHHHHEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHH
EQFQLDVPKITTHASKIWLEQIPSAISHLKTQQEITALTGGAHAAAWVVDGQIVALFEDV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEHHHHH
GRHNALDKLLGYLAQENYDTSLGFVVMTSRASYELIRKCAQLNIGLLASISAPTSMAIQL
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHH
AKQSGLTLASFCRGDGFVLYTEI
HHHCCCEEEHHHCCCCEEEEEEC
>Mature Secondary Structure 
TPHAYGVETLPVQRFNKTESENVLDHIVQEYPIALVYNGISHAVMMATPTDVDLFAKGF
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCHHHHHCCC
SLSEGILTSLKELYTLDVHQNELGITVEMTISSRAFAALKEHRRMMVGRTGCGLCGIESL
CCHHHHHHHHHHHHEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHH
EQFQLDVPKITTHASKIWLEQIPSAISHLKTQQEITALTGGAHAAAWVVDGQIVALFEDV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEHHHHH
GRHNALDKLLGYLAQENYDTSLGFVVMTSRASYELIRKCAQLNIGLLASISAPTSMAIQL
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHH
AKQSGLTLASFCRGDGFVLYTEI
HHHCCCEEEHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA