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The map label for this gene is perM [C]

Identifier: 213158290

GI number: 213158290

Start: 3106131

End: 3107324

Strand: Reverse

Name: perM [C]

Synonym: AB57_3013

Alternate gene names: 213158290

Gene position: 3107324-3106131 (Counterclockwise)

Preceding gene: 213158293

Following gene: 213158289

Centisome position: 76.71

GC content: 39.11

Gene sequence:

>1194_bases
ATGCAAGATCGTATACTGCGCCGTATTTTCTTACTCGCAGGTATTGTATTGCTGGTATGGGTATTATACTTGCTCAAGCC
TGTGGTCATCCCATTTATTGGTGCTTTTTTCCTGGCTTATTTATTTAGTCCACTAGTCGAAGTTCTAGTAAAAATTAAGA
TACCTCGCTGGTTGGCAATTAGTATTGTTTTTATTGGTATAGGTGTAACTTTAACCGTTGCATTATGGTACCTGGTTCCA
CTGATCTGGAAACAACTTGTTTACGCTCGAGACAGTATTCCAGCGGGGATCCATTGGATTAATGCAGAGCTATTACCGTG
GATTTCTTCGACATTCCATGTCCAGCAAATGGAAATTGATACCGATCAAATGTCCAAAGCTGTGATGGATTATGTTCAGA
CCAATTACAGTGCTGATAGTATTCAAGCAGTTTTATTAAAGCTTGCACAATCAGGACTTAATTTTATTCAAATTGGTGGA
ACAGTTGTTTTAATCCCAATTATTGCTTTTTACTTCTTATTAGACTGGGACCGTATGTTACAAAACTTACGTCGTCTCAT
TCCACGGCCATATGAAGCTACGACCTTACAAATCGTCCGTGAATGCCATAGCGTGTTAGGAGCATTTGTTAAAGGTCAGT
TCCTTGTTATGCTTTTGCTTGGTGTAGTTTATGCAGTAGGCTTACAATTAATTGGACTAGAGGTCGGCCTAATTATTGGT
ATGGTGGCAGGTCTTGCCAGTATTATTCCTTATCTAGGATTTGCAGTCGGGATTATTGCAGCGGTTATTGCAAGTTTGTT
TCAATTTGGAATGGACTGGACACACTTATTACTTGTTGGCGTAGTCTTTATGATTGGGCAGGCAGTAGAGGGCTATATTC
TGCAGCCATTCCTACTCGGTGATAAAATTGGTCTTTCACCTGTTGCAGTTGTATTTGCTGTTTTAGCTGGGGCTCAATTG
GCTGGCTTTTTAGGAATGTTAATTGCATTACCTGTAGCGGCTGTCATTGTGGTGCTCTTAAAACACCTCAGAGAAAATTA
TGAACGGAGTTCATTCTATGCTCCATCTTCTACATTATTAATCCAAGAGGGTAATATTGAGCAACTTCATGTAGAAACTG
AAAATACTAAACTTGATCTTGAAGTTAAAAAACAGCAAGATACAGATACCCCGAATCTTTCAGATCAGAAATAA

Upstream 100 bases:

>100_bases
CTGAATATACGAAACTCTTATGTTATTTATGCTCGAAAATGCTATCTTTAATAAAAATATTTTCCATTTATAACGATTAA
ATCAAAAAAGGCTAGATTTT

Downstream 100 bases:

>100_bases
TTTCAAGGCCAATTCATTATATGCGTCAACTCCAACTGGATATAGAACCTCAACTTGATGCCCGAATCAGTGATTTTTCG
GGACCAGGTTGGGGGCATGT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MQDRILRRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVEVLVKIKIPRWLAISIVFIGIGVTLTVALWYLVP
LIWKQLVYARDSIPAGIHWINAELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGG
TVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIG
MVAGLASIIPYLGFAVGIIAAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQL
AGFLGMLIALPVAAVIVVLLKHLRENYERSSFYAPSSTLLIQEGNIEQLHVETENTKLDLEVKKQQDTDTPNLSDQK

Sequences:

>Translated_397_residues
MQDRILRRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVEVLVKIKIPRWLAISIVFIGIGVTLTVALWYLVP
LIWKQLVYARDSIPAGIHWINAELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGG
TVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIG
MVAGLASIIPYLGFAVGIIAAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQL
AGFLGMLIALPVAAVIVVLLKHLRENYERSSFYAPSSTLLIQEGNIEQLHVETENTKLDLEVKKQQDTDTPNLSDQK
>Mature_397_residues
MQDRILRRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVEVLVKIKIPRWLAISIVFIGIGVTLTVALWYLVP
LIWKQLVYARDSIPAGIHWINAELLPWISSTFHVQQMEIDTDQMSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGG
TVVLIPIIAFYFLLDWDRMLQNLRRLIPRPYEATTLQIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIG
MVAGLASIIPYLGFAVGIIAAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLGDKIGLSPVAVVFAVLAGAQL
AGFLGMLIALPVAAVIVVLLKHLRENYERSSFYAPSSTLLIQEGNIEQLHVETENTKLDLEVKKQQDTDTPNLSDQK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=325, Percent_Identity=25.8461538461538, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 44041; Mature: 44041

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure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EECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]