BacMap

Definition	Acinetobacter baumannii AB0057, complete genome.
Accession	NC_011586
Length	4,050,513

Click here to switch to the map view.

The map label for this gene is ydfG [C]

Identifier: 213158236

GI number: 213158236

Start: 3052709

End: 3053467

Strand: Reverse

Name: ydfG [C]

Synonym: AB57_2955

Alternate gene names: 213158236

Gene position: 3053467-3052709 (Counterclockwise)

Preceding gene: 213158237

Following gene: 213158235

Centisome position: 75.38

GC content: 37.15

Gene sequence:

>759_bases
ATGTTAGCATTAGTTACAGGCGCATCAGCAGGTTTTGGTTATAGTATTTCAAAAAAACTGATTGAGTCAGGCTATAAAGT
TATTGGATGTGGAAGACGCGCAGAAAAATTAGAAGAACTACAAAAACAGCTTGGCGAAAATTTCTACCCACTCGTATTTG
ATATGACTGATACAGCAGAAAATATAAATAAGTTATTTAAAGAATTACCAAATGAATTTCAAATCGATCAAATTGACTTA
CTAGTGAATAATGCAGGCTTGGCATTGGGTCTAGAGCCAGCAGATAAAGCGGATTTAGATGATTGGTACACCATGATTGA
TACCAATGTTAAAGGCCTTGTTACGGTTACCCGATTAATTTTACCAAGTATGGTAAAGAAGAAATCAGGCTTAATCATTA
ATATGGGTTCAATTGCAGGTACATACCCATATCCAGGTGGTAATGTGTATGGGGCAACAAAAGCTTTTGTAGAGCAGTTT
AGTTTAAATCTACGTGCAGATTTGGCTGGTACTGGCGTGCGAGTAACGAATATTGAGCCAGGGTTGTGTGGTGGTACCGA
ATTTTCTCTTGTACGTTTTAAGGGGGATCAGGAGAAAGCTAATAGTCTATACGATAAGAAAAATCCAATTTTGCCGGAAG
ATATTGCAAATACAGTAGCATGGATCGCATCACAACCACCGCATATTAATATTAACCGTATAGAAATGATGCCAACGACT
CAGACTTTTAACCCTTTAAAAGTTGTAGAAGTGGAATAA

Upstream 100 bases:

>100_bases
TTATTTTTTTAGGCTAATAATAAATATTGTGTAAATATAAAGGCTGATATGTTCATCATGAGTTCAACTGAAACAGTTGA
TTATTTCTAAGGATATAAGA

Downstream 100 bases:

>100_bases
TGTAATTTTAAAAAGATCTAAGCGTAGAAGATCACCTAAGTTTAGAACTGATGATTCGATCTGGTAAATATTCAAATTAT
GAAAAGCAAATCCTCTACAG

Product: short-chain dehydrogenase/reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLALVTGASAGFGYSISKKLIESGYKVIGCGRRAEKLEELQKQLGENFYPLVFDMTDTAENINKLFKELPNEFQIDQIDL
LVNNAGLALGLEPADKADLDDWYTMIDTNVKGLVTVTRLILPSMVKKKSGLIINMGSIAGTYPYPGGNVYGATKAFVEQF
SLNLRADLAGTGVRVTNIEPGLCGGTEFSLVRFKGDQEKANSLYDKKNPILPEDIANTVAWIASQPPHININRIEMMPTT
QTFNPLKVVEVE

Sequences:

>Translated_252_residues
MLALVTGASAGFGYSISKKLIESGYKVIGCGRRAEKLEELQKQLGENFYPLVFDMTDTAENINKLFKELPNEFQIDQIDL
LVNNAGLALGLEPADKADLDDWYTMIDTNVKGLVTVTRLILPSMVKKKSGLIINMGSIAGTYPYPGGNVYGATKAFVEQF
SLNLRADLAGTGVRVTNIEPGLCGGTEFSLVRFKGDQEKANSLYDKKNPILPEDIANTVAWIASQPPHININRIEMMPTT
QTFNPLKVVEVE
>Mature_252_residues
MLALVTGASAGFGYSISKKLIESGYKVIGCGRRAEKLEELQKQLGENFYPLVFDMTDTAENINKLFKELPNEFQIDQIDL
LVNNAGLALGLEPADKADLDDWYTMIDTNVKGLVTVTRLILPSMVKKKSGLIINMGSIAGTYPYPGGNVYGATKAFVEQF
SLNLRADLAGTGVRVTNIEPGLCGGTEFSLVRFKGDQEKANSLYDKKNPILPEDIANTVAWIASQPPHININRIEMMPTT
QTFNPLKVVEVE

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=250, Percent_Identity=35.2, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI40548397, Length=179, Percent_Identity=33.5195530726257, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI214010158, Length=179, Percent_Identity=33.5195530726257, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI214010156, Length=179, Percent_Identity=33.5195530726257, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI22758144, Length=179, Percent_Identity=33.5195530726257, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI20149619, Length=190, Percent_Identity=32.6315789473684, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI7706318, Length=189, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI22507405, Length=178, Percent_Identity=33.1460674157303, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI150247226, Length=210, Percent_Identity=29.0476190476191, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI7705855, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI4557649, Length=183, Percent_Identity=29.5081967213115, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI19923817, Length=188, Percent_Identity=27.6595744680851, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI50726952, Length=183, Percent_Identity=30.0546448087432, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI32483357, Length=232, Percent_Identity=26.7241379310345, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4504503, Length=182, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI31542939, Length=190, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI157739938, Length=187, Percent_Identity=26.2032085561497, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI19743808, Length=178, Percent_Identity=28.0898876404494, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI119392083, Length=207, Percent_Identity=29.951690821256, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40254992, Length=179, Percent_Identity=27.3743016759777, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI4758504, Length=195, Percent_Identity=27.1794871794872, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI226371731, Length=183, Percent_Identity=24.5901639344262, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI7657478, Length=264, Percent_Identity=26.1363636363636, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI66933014, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787820, Length=248, Percent_Identity=57.6612903225806, Blast_Score=297, Evalue=4e-82,
Organism=Escherichia coli, GI1787335, Length=228, Percent_Identity=32.8947368421053, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1786812, Length=244, Percent_Identity=27.4590163934426, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=30.0395256916996, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786701, Length=180, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790717, Length=227, Percent_Identity=27.3127753303965, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=26.8595041322314, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=245, Percent_Identity=31.0204081632653, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562908, Length=242, Percent_Identity=31.404958677686, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=241, Percent_Identity=27.8008298755187, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=247, Percent_Identity=27.1255060728745, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=243, Percent_Identity=29.6296296296296, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=193, Percent_Identity=31.0880829015544, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI25152911, Length=258, Percent_Identity=26.3565891472868, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI212646214, Length=237, Percent_Identity=27.4261603375527, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=230, Percent_Identity=28.695652173913, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=238, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=242, Percent_Identity=30.1652892561983, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=233, Percent_Identity=29.1845493562232, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=194, Percent_Identity=31.9587628865979, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=241, Percent_Identity=27.8008298755187, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=245, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=238, Percent_Identity=25.6302521008403, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560176, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17559552, Length=191, Percent_Identity=30.8900523560209, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17557668, Length=200, Percent_Identity=30, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=243, Percent_Identity=27.9835390946502, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=180, Percent_Identity=30, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=190, Percent_Identity=30.5263157894737, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=250, Percent_Identity=27.6, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=239, Percent_Identity=26.7782426778243, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=193, Percent_Identity=27.979274611399, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71997402, Length=174, Percent_Identity=30.4597701149425, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=248, Percent_Identity=24.5967741935484, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=241, Percent_Identity=29.045643153527, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=240, Percent_Identity=27.0833333333333, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115534660, Length=182, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=246, Percent_Identity=39.4308943089431, Blast_Score=165, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6322067, Length=230, Percent_Identity=31.304347826087, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322227, Length=234, Percent_Identity=29.9145299145299, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6319635, Length=189, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322226, Length=184, Percent_Identity=27.7173913043478, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007236, Length=257, Percent_Identity=31.1284046692607, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI23397609, Length=183, Percent_Identity=33.879781420765, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281364494, Length=255, Percent_Identity=28.6274509803922, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=32, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI161076933, Length=183, Percent_Identity=28.4153005464481, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24584748, Length=183, Percent_Identity=28.4153005464481, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24640442, Length=194, Percent_Identity=29.3814432989691, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI28571526, Length=183, Percent_Identity=35.5191256830601, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24641232, Length=260, Percent_Identity=28.4615384615385, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24663911, Length=256, Percent_Identity=26.953125, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24643142, Length=177, Percent_Identity=31.638418079096, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=233, Percent_Identity=30.0429184549356, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007238, Length=180, Percent_Identity=32.7777777777778, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24648693, Length=255, Percent_Identity=27.0588235294118, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355889, Length=255, Percent_Identity=27.0588235294118, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24641388, Length=256, Percent_Identity=27.734375, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571387, Length=257, Percent_Identity=26.4591439688716, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI116007234, Length=258, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24584744, Length=186, Percent_Identity=30.1075268817204, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28574402, Length=186, Percent_Identity=30.1075268817204, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24644339, Length=233, Percent_Identity=26.1802575107296, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=30.2040816326531, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21355631, Length=175, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI21355319, Length=232, Percent_Identity=27.5862068965517, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24584752, Length=186, Percent_Identity=29.5698924731183, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17737361, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27636; Mature: 27636

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALVTGASAGFGYSISKKLIESGYKVIGCGRRAEKLEELQKQLGENFYPLVFDMTDTAE
CEEEEECCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHH
NINKLFKELPNEFQIDQIDLLVNNAGLALGLEPADKADLDDWYTMIDTNVKGLVTVTRLI
HHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
LPSMVKKKSGLIINMGSIAGTYPYPGGNVYGATKAFVEQFSLNLRADLAGTGVRVTNIEP
HHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCC
GLCGGTEFSLVRFKGDQEKANSLYDKKNPILPEDIANTVAWIASQPPHININRIEMMPTT
CCCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
QTFNPLKVVEVE
CCCCCEEEEEEC
>Mature Secondary Structure
MLALVTGASAGFGYSISKKLIESGYKVIGCGRRAEKLEELQKQLGENFYPLVFDMTDTAE
CEEEEECCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHH
NINKLFKELPNEFQIDQIDLLVNNAGLALGLEPADKADLDDWYTMIDTNVKGLVTVTRLI
HHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
LPSMVKKKSGLIINMGSIAGTYPYPGGNVYGATKAFVEQFSLNLRADLAGTGVRVTNIEP
HHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCC
GLCGGTEFSLVRFKGDQEKANSLYDKKNPILPEDIANTVAWIASQPPHININRIEMMPTT
CCCCCCCEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC
QTFNPLKVVEVE
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]