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The map label for this gene is cas

Identifier: 213158189

GI number: 213158189

Start: 2998616

End: 2999581

Strand: Reverse

Name: cas

Synonym: AB57_2906

Alternate gene names: NA

Gene position: 2999581-2998616 (Counterclockwise)

Preceding gene: 213158190

Following gene: 213158188

Centisome position: 74.05

GC content: 40.89

Gene sequence:

>966_bases
ATGGAACAACTTAACCCATCTGACTTAAAAGCAATATTACATTCTAAACGAGCTAATCTGTACTACCTTGAACATTGTCG
AGTAATGCAAAAAGATGGGCGAGTTTTATATCTCACTGAAGCGAAGAACGAAAACCAATATTGGAATATTCCAATTGCTA
ACACCACTGTAATTTTACTTGGAACAGGTACATCCATTACTCAAGCTGCGATGCGAATGTTATGTAGTGCAGGGGTATTG
GTGGGGTTTTGTGGAGGTGGTGGAACGCCTTTATTTGCAGGTAGTGAGGTGGAGTGGTTAACACCTCAGAGTGAATATCG
ACCAACGGAATACATGCAAGGCTGGATGAGCTTTTGGTTTGATGAAACCAAACGTTTAGATGTTGCGAAAGCGTTTCAAT
TTGCCCGGATTGAATTTATCCGCAAAATTTGGGCGAAAGATAAAGATTTAAAAGATGAAGGCTTCTATTTAGATAATCTG
GATATTCAACAAGCTTTGAATGGTTTTGAAAAGAAAATTCCTAACATGACTAAGGTTGGGGATTTATTGCTTGCAGAGGC
TCAAACAACCAAACAACTTTATAAAATTGCAGCGACTCGTTGCAAACTCAGTTTTGAACGGAACCCTGAGCAGGGTGACC
TTGCGAATGACTTTTTGAACCATGGCAATTATTTGGCCTATGGCCTAAGTGCGACGACACTTTGGGTACTAGGAATTAGC
CATAGTTTTGCGGTGATGCATGGTAAAACCCGACGAGGTGCTTTGGTGTTTGATGTGGCTGATTTGATTAAAGATGCTGT
GGTTTTACCTTGGGCATTTATTTGTGCTAAAGAAGGGGCGACTGAGCAGGAGTTCCGTCAACAGCTATTGCAGAAATTTA
CGGATTATCGGTGCCTTGACTGGATGTTTGATCAGGTGAAGTTACAGGCATGTAAAAGCTTTCCAAATTTGGAGAGCGAA
TTATGA

Upstream 100 bases:

>100_bases
AAAGTAATAAAACGACATATACTGTCGCACAGCTGCTTAGGCAGCTTTTTTATTACCTAATGTTTAAGTAATATAAGAAA
AAACAAGAGAAATCAAAAGA

Downstream 100 bases:

>100_bases
TCGTAACCTTTATTTCCCAATGCGGAAAGAAAGCGATTCCTCGAACTCGTCGCGTGTTAGATGCTTTTGCAGATCGGATC
GGTGATAACACATGGCAAAC

Product: crispr-associated protein Cas1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MEQLNPSDLKAILHSKRANLYYLEHCRVMQKDGRVLYLTEAKNENQYWNIPIANTTVILLGTGTSITQAAMRMLCSAGVL
VGFCGGGGTPLFAGSEVEWLTPQSEYRPTEYMQGWMSFWFDETKRLDVAKAFQFARIEFIRKIWAKDKDLKDEGFYLDNL
DIQQALNGFEKKIPNMTKVGDLLLAEAQTTKQLYKIAATRCKLSFERNPEQGDLANDFLNHGNYLAYGLSATTLWVLGIS
HSFAVMHGKTRRGALVFDVADLIKDAVVLPWAFICAKEGATEQEFRQQLLQKFTDYRCLDWMFDQVKLQACKSFPNLESE
L

Sequences:

>Translated_321_residues
MEQLNPSDLKAILHSKRANLYYLEHCRVMQKDGRVLYLTEAKNENQYWNIPIANTTVILLGTGTSITQAAMRMLCSAGVL
VGFCGGGGTPLFAGSEVEWLTPQSEYRPTEYMQGWMSFWFDETKRLDVAKAFQFARIEFIRKIWAKDKDLKDEGFYLDNL
DIQQALNGFEKKIPNMTKVGDLLLAEAQTTKQLYKIAATRCKLSFERNPEQGDLANDFLNHGNYLAYGLSATTLWVLGIS
HSFAVMHGKTRRGALVFDVADLIKDAVVLPWAFICAKEGATEQEFRQQLLQKFTDYRCLDWMFDQVKLQACKSFPNLESE
L
>Mature_321_residues
MEQLNPSDLKAILHSKRANLYYLEHCRVMQKDGRVLYLTEAKNENQYWNIPIANTTVILLGTGTSITQAAMRMLCSAGVL
VGFCGGGGTPLFAGSEVEWLTPQSEYRPTEYMQGWMSFWFDETKRLDVAKAFQFARIEFIRKIWAKDKDLKDEGFYLDNL
DIQQALNGFEKKIPNMTKVGDLLLAEAQTTKQLYKIAATRCKLSFERNPEQGDLANDFLNHGNYLAYGLSATTLWVLGIS
HSFAVMHGKTRRGALVFDVADLIKDAVVLPWAFICAKEGATEQEFRQQLLQKFTDYRCLDWMFDQVKLQACKSFPNLESE
L

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36591; Mature: 36591

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLNPSDLKAILHSKRANLYYLEHCRVMQKDGRVLYLTEAKNENQYWNIPIANTTVILL
CCCCCHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCEEEEEE
GTGTSITQAAMRMLCSAGVLVGFCGGGGTPLFAGSEVEWLTPQSEYRPTEYMQGWMSFWF
ECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
DETKRLDVAKAFQFARIEFIRKIWAKDKDLKDEGFYLDNLDIQQALNGFEKKIPNMTKVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHH
DLLLAEAQTTKQLYKIAATRCKLSFERNPEQGDLANDFLNHGNYLAYGLSATTLWVLGIS
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCEEEEECCHHEEEEEECC
HSFAVMHGKTRRGALVFDVADLIKDAVVLPWAFICAKEGATEQEFRQQLLQKFTDYRCLD
CCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH
WMFDQVKLQACKSFPNLESEL
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEQLNPSDLKAILHSKRANLYYLEHCRVMQKDGRVLYLTEAKNENQYWNIPIANTTVILL
CCCCCHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCEEEEEE
GTGTSITQAAMRMLCSAGVLVGFCGGGGTPLFAGSEVEWLTPQSEYRPTEYMQGWMSFWF
ECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
DETKRLDVAKAFQFARIEFIRKIWAKDKDLKDEGFYLDNLDIQQALNGFEKKIPNMTKVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHH
DLLLAEAQTTKQLYKIAATRCKLSFERNPEQGDLANDFLNHGNYLAYGLSATTLWVLGIS
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCEEEEECCHHEEEEEECC
HSFAVMHGKTRRGALVFDVADLIKDAVVLPWAFICAKEGATEQEFRQQLLQKFTDYRCLD
CCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH
WMFDQVKLQACKSFPNLESEL
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA