| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
Click here to switch to the map view.
The map label for this gene is ycbZ [H]
Identifier: 213158143
GI number: 213158143
Start: 2944365
End: 2946983
Strand: Direct
Name: ycbZ [H]
Synonym: AB57_2857
Alternate gene names: 213158143
Gene position: 2944365-2946983 (Clockwise)
Preceding gene: 213158138
Following gene: 213158147
Centisome position: 72.69
GC content: 41.5
Gene sequence:
>2619_bases GTGACACAAAAACTTGATCAAGTGACATCTTCAACTTTATCACTCGCTAAAACAAACACCACAAACGTCACAATAAATGC ATTTCCTTCAGCTTTTGAGCAACCTGATATTAAAATGACTTTAGATAAAACAGCGTTAAAACCCGAACAACTTACGCATA TTCCAAATTTTGAAAATATTCCAGCCTCAACAAAACGCATCAAGCCGCTCAACAACTTTTTAGGGCAAGACCGTGCCAAA GCTTCGGTAGAAGCTGGCATTTCCTTACCCTACTCTGGTTATAACATTTTTGCGGTAGGAACAGCAGGCTTAGGTAAACG CACCATGATTAAGCGTTTACTACAACAACATGCCAAAACAATGCCTACTCCAGATGATTGGGTATATGTTTATAACTTTA AACAGGCTCGTCAGCCCATTGCGCTACGCTTCCCTGCTGGACAAGGAATCAAGTTTCAACAAACTCTTCATCAAACTTGG CAAATTATTTTAAAGCAGCTTGAACGCCGTTTTAGCGCAGAGACTTATCATAACCGTATCGAGCGAATCCGTCAGGAAAC TGGTGATGAACAGCAACAAGCACTTGTCGAATTAACAAAAGAAGGCGAAGAACTTGATCTAAAATTGATTTCTCGAAATG AGAAACATGGCTTTGTACCTGTACAGTTAAAAGATAATCAGGTTCAAGAACTGACTCAAACAGAAATTGACGCTTTAAAT AGTAAACAGCGTGCTGAGATTGCAGCCAATATTCGCTATATGGATAAAAAGCTTGAGCGTCTTGGTCTGCATTTGGGCGA CTTAGAAGATGATGCGCGTGACAAAGTTTCTGTTTTAAATCGAGACATCGCCACTCAAGTGGTTATGCCACGCATGGACT TAATTTTAAATAAATATGGTCAAGTGAAAGGCCTTGAAGATTATTTAAAACAGTATGCTCAAGATATCATTGACAATGTT GAGTTAATTTTAGAACAAGAAGAAGATGACTTTGCTCCTGCTATGTTCAATCGCGTACCGGCGCGTTATCAAGCAAATGT GATTGTCTCAAACAAGCCAAATAGCGGTGCACCGGTTATTTTTGAAGATTTCCCAACGCACTACAACTTGCTGGGTCATG TAGAACAACTCACCCACAACGGTACAATTACTACAGATTTCACTCTTATTCGTCCCGGTGCCCTACATCAAGCCAATGGT GGTTTTTTAATGCTGGAGGCTGAACAACTACTCGAACAGCCTTATGCATGGCAGGGTTTAAAGCGTGCCTTAAAATCGGG CCAACTCAAGCTCTCTTCTCTTGAACATATGCTGACTTTAACCGGCAGTATCTCGATAGAGCCTGCTGCTATTCCACTTG ATATTAAAGTGGTACTGATGGCAGAGCCTGAGATTTATTATGAAATTTTAGAAGTAGAACCAGAGCTTGGTAGCGTATTT AAAATTCGCGCAGATTTTACCGATACATTACAACGTAATGACGAAAATGAACAAGCCTATATGCAGCTGATTGCTGACTA TGTACAAGCCGATAAACTGCTTCCATTTGACCGCAGTGCTCTAGCGGCATTACTAACTGACTCAAGCCGTCAGGCCGAAG ACCAAAGCTCATTGTCGTTACATGCTTCAACGTTGGGTGATCTTATTCGTGAAGCGCATCATCATGCATTTAAAGCCAAT GATAAGATGGTAACCGACCAGCACATTAACCTTGCCCTACAACACCGACAATATCGCTTAGGCTATTTAAGAGAACTTTA CTGGCAAGATTTATCGCGTGGAACCCAGTTAATCGAAACTTCTGGCCATCGTTTAGGTCAAATTAATGCCCTCTCTGTCA TTCACTATGCAGATGTTGAGTTTGGTTTACCTTCACGCTTAACTGCCTCGGTTTATCAAGGCGGTGGCGATATTCTTGAT ATTGAACGTAGTGTAGAACTAGGCGGTTCATTGCATGCCAAAGGCGTGTTACTCATGTCTAGCTTCTTAAAAGCTCACTT TGGCCGTGAACAGATTTTACATTTTTCTGCTGCTCTGGCTTTTGAGCAAAGCTACGGACAAGTGGACGGCGACAGTGCAA CCGTTGCCGAGCTTTCTGCATTAATCTCTGCAATTAGCCAGTTACCAATTGATCAGTCATGGGCAATTACCGGTTCTATG AACCAGTTAGGTCAAGTTCAACCAATTGGTGGCGTAAATGCAAAAATTGAGGGCTTCTATGATGCATGTAAGCTACAAGG TTTAACTGGCAAACAGGGTGTCATTATTCCACGCCAAAACATGCAACACTTGATGCTACGTCAAGATGTGATTGATGCGG TGCGAATGGGTCAATTCCATATCCATGCAATTGATACAATTGATCAAGCACTTGAGATTTTAATGGCTCGCCCTGTTGGT ACCCTCGACAAAAAAGGCAAATACAGTAAGCATTCTATTTATGCCGCTGTAATGGAACAACTTGAGTACTGGCAAGCGAT CGAAGATGGCGCAGAAGTTGAAGAGGAGCCGAAGAAGAAAAAGAAAAATAAGAAAAAAATTAAAAAGCATGAAGAGCTCA CAGCCGATGATCTTCCTCAAGAAACTCAAGAGGAAGTTGCTACGCTAAAGCAAAAATAA
Upstream 100 bases:
>100_bases TTTGTTTTGATGATAAAAACGGCAAGTTTGCTTGATATTTTATGCTAAACCTGTATACCTTTAATCTTCAACCTTCGTTT TCTTTTGCTGGATATCAACA
Downstream 100 bases:
>100_bases CACTGACATAAAAAAGGGCTTGTAATAACAAGCCCTTTTTTATGAATGAGATAAAAGTTAACGAACAATCTGCATTGCTC TTCCGCCAGCCAACTGGCTG
Product: peptidase S16, lon domain protein
Products: NA
Alternate protein names: ATP-dependent protease La homolog [H]
Number of amino acids: Translated: 872; Mature: 871
Protein sequence:
>872_residues MTQKLDQVTSSTLSLAKTNTTNVTINAFPSAFEQPDIKMTLDKTALKPEQLTHIPNFENIPASTKRIKPLNNFLGQDRAK ASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKTMPTPDDWVYVYNFKQARQPIALRFPAGQGIKFQQTLHQTW QIILKQLERRFSAETYHNRIERIRQETGDEQQQALVELTKEGEELDLKLISRNEKHGFVPVQLKDNQVQELTQTEIDALN SKQRAEIAANIRYMDKKLERLGLHLGDLEDDARDKVSVLNRDIATQVVMPRMDLILNKYGQVKGLEDYLKQYAQDIIDNV ELILEQEEDDFAPAMFNRVPARYQANVIVSNKPNSGAPVIFEDFPTHYNLLGHVEQLTHNGTITTDFTLIRPGALHQANG GFLMLEAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAIPLDIKVVLMAEPEIYYEILEVEPELGSVF KIRADFTDTLQRNDENEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKAN DKMVTDQHINLALQHRQYRLGYLRELYWQDLSRGTQLIETSGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILD IERSVELGGSLHAKGVLLMSSFLKAHFGREQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSM NQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVIDAVRMGQFHIHAIDTIDQALEILMARPVG TLDKKGKYSKHSIYAAVMEQLEYWQAIEDGAEVEEEPKKKKKNKKKIKKHEELTADDLPQETQEEVATLKQK
Sequences:
>Translated_872_residues MTQKLDQVTSSTLSLAKTNTTNVTINAFPSAFEQPDIKMTLDKTALKPEQLTHIPNFENIPASTKRIKPLNNFLGQDRAK ASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKTMPTPDDWVYVYNFKQARQPIALRFPAGQGIKFQQTLHQTW QIILKQLERRFSAETYHNRIERIRQETGDEQQQALVELTKEGEELDLKLISRNEKHGFVPVQLKDNQVQELTQTEIDALN SKQRAEIAANIRYMDKKLERLGLHLGDLEDDARDKVSVLNRDIATQVVMPRMDLILNKYGQVKGLEDYLKQYAQDIIDNV ELILEQEEDDFAPAMFNRVPARYQANVIVSNKPNSGAPVIFEDFPTHYNLLGHVEQLTHNGTITTDFTLIRPGALHQANG GFLMLEAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAIPLDIKVVLMAEPEIYYEILEVEPELGSVF KIRADFTDTLQRNDENEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKAN DKMVTDQHINLALQHRQYRLGYLRELYWQDLSRGTQLIETSGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILD IERSVELGGSLHAKGVLLMSSFLKAHFGREQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSM NQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVIDAVRMGQFHIHAIDTIDQALEILMARPVG TLDKKGKYSKHSIYAAVMEQLEYWQAIEDGAEVEEEPKKKKKNKKKIKKHEELTADDLPQETQEEVATLKQK >Mature_871_residues TQKLDQVTSSTLSLAKTNTTNVTINAFPSAFEQPDIKMTLDKTALKPEQLTHIPNFENIPASTKRIKPLNNFLGQDRAKA SVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKTMPTPDDWVYVYNFKQARQPIALRFPAGQGIKFQQTLHQTWQ IILKQLERRFSAETYHNRIERIRQETGDEQQQALVELTKEGEELDLKLISRNEKHGFVPVQLKDNQVQELTQTEIDALNS KQRAEIAANIRYMDKKLERLGLHLGDLEDDARDKVSVLNRDIATQVVMPRMDLILNKYGQVKGLEDYLKQYAQDIIDNVE LILEQEEDDFAPAMFNRVPARYQANVIVSNKPNSGAPVIFEDFPTHYNLLGHVEQLTHNGTITTDFTLIRPGALHQANGG FLMLEAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAIPLDIKVVLMAEPEIYYEILEVEPELGSVFK IRADFTDTLQRNDENEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKAND KMVTDQHINLALQHRQYRLGYLRELYWQDLSRGTQLIETSGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDI ERSVELGGSLHAKGVLLMSSFLKAHFGREQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSMN QLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVIDAVRMGQFHIHAIDTIDQALEILMARPVGT LDKKGKYSKHSIYAAVMEQLEYWQAIEDGAEVEEEPKKKKKNKKKIKKHEELTADDLPQETQEEVATLKQK
Specific function: Unknown
COG id: COG1067
COG function: function code O; Predicted ATP-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S16 family [H]
Homologues:
Organism=Escherichia coli, GI1787188, Length=440, Percent_Identity=39.5454545454545, Blast_Score=298, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008269 - InterPro: IPR001984 - InterPro: IPR020568 [H]
Pfam domain/function: PF05362 Lon_C [H]
EC number: 3.4.21.- [C]
Molecular weight: Translated: 98109; Mature: 97978
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKLDQVTSSTLSLAKTNTTNVTINAFPSAFEQPDIKMTLDKTALKPEQLTHIPNFENI CCCHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCEEEECHHCCCHHHHHCCCCCCCC PASTKRIKPLNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKT CCCHHHCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC MPTPDDWVYVYNFKQARQPIALRFPAGQGIKFQQTLHQTWQIILKQLERRFSAETYHNRI CCCCCCEEEEEECHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERIRQETGDEQQQALVELTKEGEELDLKLISRNEKHGFVPVQLKDNQVQELTQTEIDALN HHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHC SKQRAEIAANIRYMDKKLERLGLHLGDLEDDARDKVSVLNRDIATQVVMPRMDLILNKYG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QVKGLEDYLKQYAQDIIDNVELILEQEEDDFAPAMFNRVPARYQANVIVSNKPNSGAPVI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCEE FEDFPTHYNLLGHVEQLTHNGTITTDFTLIRPGALHQANGGFLMLEAEQLLEQPYAWQGL EECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEEEEEHHHHHCCCHHHHHH KRALKSGQLKLSSLEHMLTLTGSISIEPAAIPLDIKVVLMAEPEIYYEILEVEPELGSVF HHHHHCCCEEHHHHHHHHHEECCEEECCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCEE KIRADFTDTLQRNDENEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSL EEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHEE HASTLGDLIREAHHHAFKANDKMVTDQHINLALQHRQYRLGYLRELYWQDLSRGTQLIET HHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH SGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGVLLMS CCCCCCCEEHEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHHHHH SFLKAHFGREQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSM HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCH NQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVIDAVRMGQFH HHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEE IHAIDTIDQALEILMARPVGTLDKKGKYSKHSIYAAVMEQLEYWQAIEDGAEVEEEPKKK EEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KKNKKKIKKHEELTADDLPQETQEEVATLKQK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TQKLDQVTSSTLSLAKTNTTNVTINAFPSAFEQPDIKMTLDKTALKPEQLTHIPNFENI CCHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCEEEECHHCCCHHHHHCCCCCCCC PASTKRIKPLNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKT CCCHHHCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC MPTPDDWVYVYNFKQARQPIALRFPAGQGIKFQQTLHQTWQIILKQLERRFSAETYHNRI CCCCCCEEEEEECHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERIRQETGDEQQQALVELTKEGEELDLKLISRNEKHGFVPVQLKDNQVQELTQTEIDALN HHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHC SKQRAEIAANIRYMDKKLERLGLHLGDLEDDARDKVSVLNRDIATQVVMPRMDLILNKYG CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QVKGLEDYLKQYAQDIIDNVELILEQEEDDFAPAMFNRVPARYQANVIVSNKPNSGAPVI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCEE FEDFPTHYNLLGHVEQLTHNGTITTDFTLIRPGALHQANGGFLMLEAEQLLEQPYAWQGL EECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEEEEEHHHHHCCCHHHHHH KRALKSGQLKLSSLEHMLTLTGSISIEPAAIPLDIKVVLMAEPEIYYEILEVEPELGSVF HHHHHCCCEEHHHHHHHHHEECCEEECCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCEE KIRADFTDTLQRNDENEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSL EEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHEE HASTLGDLIREAHHHAFKANDKMVTDQHINLALQHRQYRLGYLRELYWQDLSRGTQLIET HHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH SGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGVLLMS CCCCCCCEEHEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEHHHHHCCCCCCHHHHHHHH SFLKAHFGREQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSM HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCH NQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVIDAVRMGQFH HHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEE IHAIDTIDQALEILMARPVGTLDKKGKYSKHSIYAAVMEQLEYWQAIEDGAEVEEEPKKK EEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KKNKKKIKKHEELTADDLPQETQEEVATLKQK HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]