Click here to switch to the map view.

The map label for this gene is ynhG [C]

Identifier: 213158089

GI number: 213158089

Start: 2879263

End: 2880510

Strand: Direct

Name: ynhG [C]

Synonym: AB57_2801

Alternate gene names: 213158089

Gene position: 2879263-2880510 (Clockwise)

Preceding gene: 213158084

Following gene: 213158099

Centisome position: 71.08

GC content: 40.06

Gene sequence:

>1248_bases
ATGTTTGTTCGCTCATTACTCGCTATGAGTTTAAGTTGTATTATTGCTAATGTTGCTTTGGCTGCGTCAACAACTGAGCA
ACCACTGAACCCTAATAAAGTATCTGCTCCTGTAGAAGATCCGATTGATCCGCTTGCTGTAGATGCTGCTTCAACTGTAA
AAGCTCAAGCTCAGACTCAGATTACTGCACAAGAACAAAATGACCTAAATAGAGCGTCAACAACATTACAAAATTTACAA
AAAGCTGAAGACCAAAATGCTGATTCAGGTATTGCCGCTTCAACGCCAGTAGCTACGGCTAAAACCACAACAGCTACTGC
GTCTACAGCAACTTCTGCGCCAGCGGTTACATGGACATTAGATAGCTTAAACAACGCTGAGTGGTATGAAAATATTGGCA
AAGGCCAACTTCCAGTTTATGCACGCGCTCACGTTATGCTTAATAATGCACATGCTTCACCGGGTGCTATCGATGGCATG
AGCGGTAAAAATACATTAAAAGCAATTGCATCTTTCCAGCAAATGAATGGTTTATCTCCTACTGGCGAGTTAACTAAAGA
GACTTGGGATGCGCTTGTTGCTAAACAAAACAAACCAGCATTTATTGAATACACCATTACCGATGCCGATTTAAAAGGTC
CTTACGCACAATCAATTCCTTCTGACTATGCTTTACAAGCAAAAATGAAAGGTTTGTACTACACACGCGTAAGTGAAATG
TTGGGCGAGAAGTTTCATATTGATGAAGCCTTCTTAAAGAAAATTAACCCGACTGCGACATTCAAAAAAGTTGGTGAAAA
AATCATTGTTCCAAATGTACGCAATGACTTACCAGAAGATATTCACTTGATTATTGCGCATAAAGGTGCAAAACAGTTGT
ATCTGTTTAACAGCCGTAATCAAATGATTGCGTCATTTCCTGCAACAATTGGCAGTACTGATACGCCATCTCCGACCGGT
ACTTACAAGGTAGTAGGTGTAGCACGTAACCCTTGGTACAGCTACTCTCCTTCTAACTTTGTACAAGGCAATAACTTAAA
ACCGCTTTCATTACCACCAGGTCCAAATGCTCCTGTAGGTAATATCTGGATTGGTTTAAGCAAAAAATCATTTGGTATTC
ACGGTACACCAAACCCGTCTTTAATTTCTAAAACTGCATCACACGGTTGTATCCGTTTAACGAACTGGGATGCTAACGAT
TTAGGTAATAAAGTACGTTCAGGCGTAACTGTTAAATTCTTAGAATAA

Upstream 100 bases:

>100_bases
GCCAATATTAAATTCATAAGAATGAATGATTGGTGAGTTTATGGCCTAAAGGATCTGATTTTCCCTATTGCTTATATGAA
AATTCTTAAGGTTGAATTAC

Downstream 100 bases:

>100_bases
TCCTCTTAATTAAAAAAGCCTGCTTTATGCAGGCTTTTTTATTAAATTTTTTAGCATAGCCCCGTGGAATATGTAGTTAT
TGTTTTGGCTATAAAAATAA

Product: ErfK/YbiS/YcfS/YnhG family

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MFVRSLLAMSLSCIIANVALAASTTEQPLNPNKVSAPVEDPIDPLAVDAASTVKAQAQTQITAQEQNDLNRASTTLQNLQ
KAEDQNADSGIAASTPVATAKTTTATASTATSAPAVTWTLDSLNNAEWYENIGKGQLPVYARAHVMLNNAHASPGAIDGM
SGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADLKGPYAQSIPSDYALQAKMKGLYYTRVSEM
LGEKFHIDEAFLKKINPTATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTG
TYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDAND
LGNKVRSGVTVKFLE

Sequences:

>Translated_415_residues
MFVRSLLAMSLSCIIANVALAASTTEQPLNPNKVSAPVEDPIDPLAVDAASTVKAQAQTQITAQEQNDLNRASTTLQNLQ
KAEDQNADSGIAASTPVATAKTTTATASTATSAPAVTWTLDSLNNAEWYENIGKGQLPVYARAHVMLNNAHASPGAIDGM
SGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADLKGPYAQSIPSDYALQAKMKGLYYTRVSEM
LGEKFHIDEAFLKKINPTATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTG
TYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDAND
LGNKVRSGVTVKFLE
>Mature_415_residues
MFVRSLLAMSLSCIIANVALAASTTEQPLNPNKVSAPVEDPIDPLAVDAASTVKAQAQTQITAQEQNDLNRASTTLQNLQ
KAEDQNADSGIAASTPVATAKTTTATASTATSAPAVTWTLDSLNNAEWYENIGKGQLPVYARAHVMLNNAHASPGAIDGM
SGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADLKGPYAQSIPSDYALQAKMKGLYYTRVSEM
LGEKFHIDEAFLKKINPTATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTG
TYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDAND
LGNKVRSGVTVKFLE

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 44495; Mature: 44495

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVRSLLAMSLSCIIANVALAASTTEQPLNPNKVSAPVEDPIDPLAVDAASTVKAQAQTQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHE
ITAQEQNDLNRASTTLQNLQKAEDQNADSGIAASTPVATAKTTTATASTATSAPAVTWTL
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DSLNNAEWYENIGKGQLPVYARAHVMLNNAHASPGAIDGMSGKNTLKAIASFQQMNGLSP
CCCCCCHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
TGELTKETWDALVAKQNKPAFIEYTITDADLKGPYAQSIPSDYALQAKMKGLYYTRVSEM
CHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHH
LGEKFHIDEAFLKKINPTATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLFNSRN
HCCCCCCCHHHHHHCCCCHHHHHCCCEEECCCHHHCCCCCEEEEEEECCCCEEEEECCCC
QMIASFPATIGSTDTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVG
CEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE
EEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCEEEEEEC
>Mature Secondary Structure
MFVRSLLAMSLSCIIANVALAASTTEQPLNPNKVSAPVEDPIDPLAVDAASTVKAQAQTQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHE
ITAQEQNDLNRASTTLQNLQKAEDQNADSGIAASTPVATAKTTTATASTATSAPAVTWTL
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DSLNNAEWYENIGKGQLPVYARAHVMLNNAHASPGAIDGMSGKNTLKAIASFQQMNGLSP
CCCCCCHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
TGELTKETWDALVAKQNKPAFIEYTITDADLKGPYAQSIPSDYALQAKMKGLYYTRVSEM
CHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHH
LGEKFHIDEAFLKKINPTATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLFNSRN
HCCCCCCCHHHHHHCCCCHHHHHCCCEEECCCHHHCCCCCEEEEEEECCCCEEEEECCCC
QMIASFPATIGSTDTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVG
CEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE
EEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA