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The map label for this gene is tsf [H]

Identifier: 213158044

GI number: 213158044

Start: 2819925

End: 2820800

Strand: Reverse

Name: tsf [H]

Synonym: AB57_2755

Alternate gene names: 213158044

Gene position: 2820800-2819925 (Counterclockwise)

Preceding gene: 213158045

Following gene: 213158043

Centisome position: 69.64

GC content: 41.32

Gene sequence:

>876_bases
ATGACTGCAATTACTGCAAGCATGGTAAAAGAATTACGTGACCGTACTGGTCTTGCAATGATGGAATGCAAAAAAGCATT
AACAGAAGCGAACGGTGACATCGAACTTGCTATTGATAACCTTCGTAAATCTGGTCAAGCTAAAGCTGCTAAAAAAGCTG
GCAACATTGCTGCTGACGGTGCAATCACTATCGTTCAAGACGGTAATAAAGCGATCTTAGTTGAAGTAAACTGTCAAACT
GACTTCGTTGCTAAAGACGAAAACTTCTCTAACTTTGCACACACAGTTGCTGCTGCTGCATTAGCTGCTGGCGAAACTGA
TGCTGCTAAAATTGCTGAATTAAAATTAGCTGATGGCCAATCAGTTGAAGAAGCTCGTATCGCGCTTGTTCAAAAAATCG
GTGAAAACATCCAAGTTCGTCGTGCGAAAATCGTTGAAGGCGAACAATTGGCTATCTATAAACACGGTTTAAAAATCGGT
GTTGTAGTTTCTTATACTGGTGATGCTGACACTGGTAAAGGTATTGCAATGCACGTTGCTGCATTCAACCCAGTAGCAGT
AAATGCTGAAGCTGTTCCAGCTGACCTTATCGCTAAAGAGAAAGAAATTGCTGAAGCGAAAGCGTTAGAATCTGGTAAAC
CAGCGAACATCGTTGAGAAAATGGTAACTGGTTCTGTTGAGAAATACTTAAACGAAGTTGCTCTTGACCGTCAAATGTAC
GTTATCGACAACGAGAAAAAAGTTGCTGACGTACTAAAAGCAACTGGTACAAATGTTGCTAACTTCGTACGTTTCGAAGT
TGGTGAAGGTATCGAGAAAAAAGCTGAACTTAGCTTTGCTGAAGAAGTTGCTGCTGCTCAAGCTGCTGCGAAGTAA

Upstream 100 bases:

>100_bases
AATGGTGGCAAATTAAGCGTCGAGAGTGCAAACGGCCCAGAGTTTCTTTGGGCCGTTTTTGTTGAACAGATTTATTTTCT
ACCGATTTTAGGAGATCAAC

Downstream 100 bases:

>100_bases
TTCGTATCTTCAAAAAAAGCCCCCTATGGGGCTTTTTTTATCTCTGTTGAAAACGGAATATAAAGATGACAAATAAAAAG
AATCTAGGTATTGGCGGCAT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADGAITIVQDGNKAILVEVNCQT
DFVAKDENFSNFAHTVAAAALAAGETDAAKIAELKLADGQSVEEARIALVQKIGENIQVRRAKIVEGEQLAIYKHGLKIG
VVVSYTGDADTGKGIAMHVAAFNPVAVNAEAVPADLIAKEKEIAEAKALESGKPANIVEKMVTGSVEKYLNEVALDRQMY
VIDNEKKVADVLKATGTNVANFVRFEVGEGIEKKAELSFAEEVAAAQAAAK

Sequences:

>Translated_291_residues
MTAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADGAITIVQDGNKAILVEVNCQT
DFVAKDENFSNFAHTVAAAALAAGETDAAKIAELKLADGQSVEEARIALVQKIGENIQVRRAKIVEGEQLAIYKHGLKIG
VVVSYTGDADTGKGIAMHVAAFNPVAVNAEAVPADLIAKEKEIAEAKALESGKPANIVEKMVTGSVEKYLNEVALDRQMY
VIDNEKKVADVLKATGTNVANFVRFEVGEGIEKKAELSFAEEVAAAQAAAK
>Mature_290_residues
TAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADGAITIVQDGNKAILVEVNCQTD
FVAKDENFSNFAHTVAAAALAAGETDAAKIAELKLADGQSVEEARIALVQKIGENIQVRRAKIVEGEQLAIYKHGLKIGV
VVSYTGDADTGKGIAMHVAAFNPVAVNAEAVPADLIAKEKEIAEAKALESGKPANIVEKMVTGSVEKYLNEVALDRQMYV
IDNEKKVADVLKATGTNVANFVRFEVGEGIEKKAELSFAEEVAAAQAAAK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=304, Percent_Identity=25.9868421052632, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI291084500, Length=325, Percent_Identity=24.9230769230769, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI291084498, Length=109, Percent_Identity=36.697247706422, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI291084502, Length=109, Percent_Identity=36.697247706422, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1786366, Length=286, Percent_Identity=54.1958041958042, Blast_Score=274, Evalue=4e-75,
Organism=Caenorhabditis elegans, GI17561440, Length=294, Percent_Identity=27.891156462585, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI19921466, Length=284, Percent_Identity=28.5211267605634, Blast_Score=101, Evalue=5e-22,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 30710; Mature: 30579

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHCCCEECCC
AITIVQDGNKAILVEVNCQTDFVAKDENFSNFAHTVAAAALAAGETDAAKIAELKLADGQ
EEEEEECCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCC
SVEEARIALVQKIGENIQVRRAKIVEGEQLAIYKHGLKIGVVVSYTGDADTGKGIAMHVA
CHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCEEEEEE
AFNPVAVNAEAVPADLIAKEKEIAEAKALESGKPANIVEKMVTGSVEKYLNEVALDRQMY
ECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
VIDNEKKVADVLKATGTNVANFVRFEVGEGIEKKAELSFAEEVAAAQAAAK
EEECCHHHHHHHHHCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADG
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHCCCEECCC
AITIVQDGNKAILVEVNCQTDFVAKDENFSNFAHTVAAAALAAGETDAAKIAELKLADGQ
EEEEEECCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHEEEECCCC
SVEEARIALVQKIGENIQVRRAKIVEGEQLAIYKHGLKIGVVVSYTGDADTGKGIAMHVA
CHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCEEEEEE
AFNPVAVNAEAVPADLIAKEKEIAEAKALESGKPANIVEKMVTGSVEKYLNEVALDRQMY
ECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
VIDNEKKVADVLKATGTNVANFVRFEVGEGIEKKAELSFAEEVAAAQAAAK
EEECCHHHHHHHHHCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA