| Definition | Acinetobacter baumannii AB0057, complete genome. |
|---|---|
| Accession | NC_011586 |
| Length | 4,050,513 |
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The map label for this gene is 213157986
Identifier: 213157986
GI number: 213157986
Start: 2783272
End: 2784228
Strand: Reverse
Name: 213157986
Synonym: AB57_2697
Alternate gene names: NA
Gene position: 2784228-2783272 (Counterclockwise)
Preceding gene: 213157987
Following gene: 213157985
Centisome position: 68.74
GC content: 41.07
Gene sequence:
>957_bases ATGACTACGACAGTTAATTCAGACATGATCATCTATAATCAATTGGCTCAAACTGCTTATTTAGAGCGTTTGCAAGATAA TTTGAATGTATTTAACCAAGCCTCTAATGGTGCAATTGTTTATCGCAATGAGATCATTGAAGGTGATTTCAATAAAGAAG CATTCTACAAAGTGGGCGGTAGCATCAAACATCGTGATGTGAATTCAACCGCCAAAGTAGTTCCAGAGAAAATTGGTTCT GGTGAGTCTGTAGGCGTAAAAGTCCCATATAAATATGGTCCTTATGCATCAACTGAAGAGGCATTTAAGCGCCGTGCTCG TACACCAGAAGAATTTGCTATGGTTGTTGGTTACGATCTTGCAGATGCATTGGTTGCAGGCCGATTAGAGTACAGTTTAG CTTCTTTAAAAGCTGCTATTTCTAGCAATCCAGACATGGTTGCAAAAGGTAGTATCGTTGTTGATGGCCGCAAAGCATTG ACTCGTGGTATGCGAAAGTTTGGTGATAAGTTTGGCCGCATTGGCTTATGGGTGATGAACTCAGATACATATTTCGATAT TGTCGATGATGCAATCACTAAGCAAATTTATGGTGAATCTGAAATCGTTATCTACGGTGGTTTACCGGGAACCTTAGGAA AGCCGGTCTTGGTGACGGACGCTGTAGGTGATAACGATGCTTTTGGTTTGCAGTATGGCGCTGTCACTGTAACTGAATCA CAAGTACCGGGCTTCCGAGCTTATGACATCAATGATGAAGAAAACTTAGCAATCGGTATGCGTGCTGAAGGTGCATTTAA CTTAGATATTCTTGGTTATAGTTGGGATACATCGAAAGGTGAAAATCCTGACCTTACATTACTTGGTTCAAGCGCTAACT GGATCAAATATGCAACCAGCAACAAAATGACAGCAGGTACCTTACTTGATTTATCGGGTACAGCGACAACTGGTTAA
Upstream 100 bases:
>100_bases AATGTCTGTTTCTCAGAAAGCAGATTACATCAAAGAACATGGCAATGATGCCTTCCTAAAACTACCGAACTAATCATTAA ATATTTGGAGATAAGTAGTT
Downstream 100 bases:
>100_bases AACCTAAAAATTAAAACCTAAGGGGGCTAATAAGCCCTCTTTTTATTATTAAGAGAAAAGCGCCATGAAGATTATCTATA CACGCATTGCAGCAGCGGCT
Product: major capsid protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTTTVNSDMIIYNQLAQTAYLERLQDNLNVFNQASNGAIVYRNEIIEGDFNKEAFYKVGGSIKHRDVNSTAKVVPEKIGS GESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMVVGYDLADALVAGRLEYSLASLKAAISSNPDMVAKGSIVVDGRKAL TRGMRKFGDKFGRIGLWVMNSDTYFDIVDDAITKQIYGESEIVIYGGLPGTLGKPVLVTDAVGDNDAFGLQYGAVTVTES QVPGFRAYDINDEENLAIGMRAEGAFNLDILGYSWDTSKGENPDLTLLGSSANWIKYATSNKMTAGTLLDLSGTATTG
Sequences:
>Translated_318_residues MTTTVNSDMIIYNQLAQTAYLERLQDNLNVFNQASNGAIVYRNEIIEGDFNKEAFYKVGGSIKHRDVNSTAKVVPEKIGS GESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMVVGYDLADALVAGRLEYSLASLKAAISSNPDMVAKGSIVVDGRKAL TRGMRKFGDKFGRIGLWVMNSDTYFDIVDDAITKQIYGESEIVIYGGLPGTLGKPVLVTDAVGDNDAFGLQYGAVTVTES QVPGFRAYDINDEENLAIGMRAEGAFNLDILGYSWDTSKGENPDLTLLGSSANWIKYATSNKMTAGTLLDLSGTATTG >Mature_317_residues TTTVNSDMIIYNQLAQTAYLERLQDNLNVFNQASNGAIVYRNEIIEGDFNKEAFYKVGGSIKHRDVNSTAKVVPEKIGSG ESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMVVGYDLADALVAGRLEYSLASLKAAISSNPDMVAKGSIVVDGRKALT RGMRKFGDKFGRIGLWVMNSDTYFDIVDDAITKQIYGESEIVIYGGLPGTLGKPVLVTDAVGDNDAFGLQYGAVTVTESQ VPGFRAYDINDEENLAIGMRAEGAFNLDILGYSWDTSKGENPDLTLLGSSANWIKYATSNKMTAGTLLDLSGTATTG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34424; Mature: 34293
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVNSDMIIYNQLAQTAYLERLQDNLNVFNQASNGAIVYRNEIIEGDFNKEAFYKVGG CCEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHCCC SIKHRDVNSTAKVVPEKIGSGESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMVVGYDL CEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHEEEECCCH ADALVAGRLEYSLASLKAAISSNPDMVAKGSIVVDGRKALTRGMRKFGDKFGRIGLWVMN HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCHHHHHHHHHHHHHHHCCEEEEEEC SDTYFDIVDDAITKQIYGESEIVIYGGLPGTLGKPVLVTDAVGDNDAFGLQYGAVTVTES CCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEECEEEEECC QVPGFRAYDINDEENLAIGMRAEGAFNLDILGYSWDTSKGENPDLTLLGSSANWIKYATS CCCCEEEEECCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECC NKMTAGTLLDLSGTATTG CCEEEEEEEEECCCCCCC >Mature Secondary Structure TTTVNSDMIIYNQLAQTAYLERLQDNLNVFNQASNGAIVYRNEIIEGDFNKEAFYKVGG CEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHCCC SIKHRDVNSTAKVVPEKIGSGESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMVVGYDL CEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHEEEECCCH ADALVAGRLEYSLASLKAAISSNPDMVAKGSIVVDGRKALTRGMRKFGDKFGRIGLWVMN HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCHHHHHHHHHHHHHHHCCEEEEEEC SDTYFDIVDDAITKQIYGESEIVIYGGLPGTLGKPVLVTDAVGDNDAFGLQYGAVTVTES CCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCEEEECEEEEECC QVPGFRAYDINDEENLAIGMRAEGAFNLDILGYSWDTSKGENPDLTLLGSSANWIKYATS CCCCEEEEECCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECC NKMTAGTLLDLSGTATTG CCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA