Click here to switch to the map view.

The map label for this gene is yciI [H]

Identifier: 213157932

GI number: 213157932

Start: 3534718

End: 3534936

Strand: Direct

Name: yciI [H]

Synonym: AB57_3425

Alternate gene names: 213157932

Gene position: 3534718-3534936 (Clockwise)

Preceding gene: 213157931

Following gene: 213157933

Centisome position: 87.27

GC content: 39.27

Gene sequence:

>219_bases
TTGCAAAAACTTGATGATGAAGGTCGTCTAGTTGCTGCTGGAGCGATGCCAAAAGACCCTAATGACCCGCAAGCTGGTTT
TTATGGCAGCACCATGATTGTAGAGTTTGATACACGTGAAGCCTTAGATGAATGGTTAAAAGAAGAACCATTTTTGAAAG
AAGGCATCTATAGTCATGTTGATGTCAAACCATTTAATAAAGCATTTCCAAAAGGGTAA

Upstream 100 bases:

>100_bases
AGAGATACGATGACATGTCCTTTTTTTTGTTCTAAGCTGTACCGATAACGAAGGAACTCTAGAGAAACGTTTAGCAGTAC
GTCCTCAACATATCGAACGT

Downstream 100 bases:

>100_bases
ACGCATGCAGCTTGCAACCAAAAGCTTTCTTGGCTTGTGTTTGATATGTTCAACTGCCGGAGCAGTTGAACCTGCTGCGA
CACCAGCAACGCCTCCAACT

Product: YCII-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQKLDDEGRLVAAGAMPKDPNDPQAGFYGSTMIVEFDTREALDEWLKEEPFLKEGIYSHVDVKPFNKAFPKG

Sequences:

>Translated_72_residues
MQKLDDEGRLVAAGAMPKDPNDPQAGFYGSTMIVEFDTREALDEWLKEEPFLKEGIYSHVDVKPFNKAFPKG
>Mature_72_residues
MQKLDDEGRLVAAGAMPKDPNDPQAGFYGSTMIVEFDTREALDEWLKEEPFLKEGIYSHVDVKPFNKAFPKG

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family [H]

Homologues:

Organism=Escherichia coli, GI87081861, Length=71, Percent_Identity=53.5211267605634, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 8117; Mature: 8117

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLDDEGRLVAAGAMPKDPNDPQAGFYGSTMIVEFDTREALDEWLKEEPFLKEGIYSHV
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHCCCCCC
DVKPFNKAFPKG
CCCCCCCCCCCC
>Mature Secondary Structure
MQKLDDEGRLVAAGAMPKDPNDPQAGFYGSTMIVEFDTREALDEWLKEEPFLKEGIYSHV
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHCCCCCC
DVKPFNKAFPKG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]