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The map label for this gene is oruR [H]

Identifier: 213157884

GI number: 213157884

Start: 3479727

End: 3480776

Strand: Reverse

Name: oruR [H]

Synonym: AB57_3374

Alternate gene names: 213157884

Gene position: 3480776-3479727 (Counterclockwise)

Preceding gene: 213157885

Following gene: 213157883

Centisome position: 85.93

GC content: 38.86

Gene sequence:

>1050_bases
ATGCAAGAATTTACTATCTCAAATGGTTACTTCTACCTTTGGAATACGTATTTAAAAGAAAAAGGAATAGATTGGCAGAC
ACTTAATTTAAGTGAAATTCAAACACGTCAAGTCCAAAATATTTTATCTGCTTCTATAGATGCTCAATCTTCTTTAGACC
TTTTTATTGAACTTTTAGAGATAACTGAAACGCGATTACATGTGACTAATTTGGCTTTAGAGATGGCAGCCTGTATTACC
CCTGCCAACTTTGGGGTCTTGGGTTATATGGCGTCCAGAAGTGATACCTTAGGTCAAGTGGTGGAGTATATTGCAAAGTT
TCATCGTTTGGTCATTGATGGTGCACAGGTTATCCCTATACAAATTGAACAGGATGCCTCCAAAATTCGCCTATATTGGC
CTTTGGTCGACGACAGTAATATTCTACTAAGTGAGCTGACCTTGGCTGCAATGGTACAGCTTGCTAAACAGATTGCCCCT
GTACATGAGTTTCTTTTACAGCATGTAGAGTTCGTACACCGAGCGCGTGGGGCAGTAGTTCACTATCAACGTTTCTTTCA
GTGCAAATTATCATTTGAGCGGCCTTACTATGCATTAACTTTTGCAAGTGAAAGTTTAAATGTTCGCCCTCAACATGCAG
ACCCAACTTTAGTGCAACTTTTGGTGAAACAAGCCGAAGAAGCTTTAGTTCAGCGGAAAATACATGCCGATTTAGTTCAG
CAAATACATTGGATCGTACAGGAATACTTTAAGCATAAGCAGCAAGCACCCAAAATAGAAGATATTGCCATCGAGCTTAA
TGTTTCTGTTAGAAGCTTGCAGCGCCAATTACAGGCATTAAACACTTCATTTAAATTAATTTTAGATGCTGAGCGTATGA
AACGCTGCGAGATATTGTTAAGCCAAAATGAAAGTCTGACTGCAATTGCCGACCAGTTGGGTTATTCGGATCAGTCTGCA
CTGGCAAGAGCATATAAAAATTTAACAGGGCAAACATTATTAACTCGAAAAAAGCAATTACAACTCATCCAGAAAAATGC
AACGAAATAG

Upstream 100 bases:

>100_bases
AACCTTTTCATTAGTATGTCGCGAGTGGTCGGCTTTGTTTTGACAGTTATCGCCAATTTTTATACAGTTTGCGACAAAAT
GGCAGTAAAAAGGACGCGCC

Downstream 100 bases:

>100_bases
AATTTTGGATGCTTTTTTGCTCAATTTGTAAATCAATAATGGCCCAAAAATAGGAAGCTTTGATCATTGAGAAAAGTTTC
AAAATATTGATAAATGTACG

Product: transcriptional regulator, AraC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MQEFTISNGYFYLWNTYLKEKGIDWQTLNLSEIQTRQVQNILSASIDAQSSLDLFIELLEITETRLHVTNLALEMAACIT
PANFGVLGYMASRSDTLGQVVEYIAKFHRLVIDGAQVIPIQIEQDASKIRLYWPLVDDSNILLSELTLAAMVQLAKQIAP
VHEFLLQHVEFVHRARGAVVHYQRFFQCKLSFERPYYALTFASESLNVRPQHADPTLVQLLVKQAEEALVQRKIHADLVQ
QIHWIVQEYFKHKQQAPKIEDIAIELNVSVRSLQRQLQALNTSFKLILDAERMKRCEILLSQNESLTAIADQLGYSDQSA
LARAYKNLTGQTLLTRKKQLQLIQKNATK

Sequences:

>Translated_349_residues
MQEFTISNGYFYLWNTYLKEKGIDWQTLNLSEIQTRQVQNILSASIDAQSSLDLFIELLEITETRLHVTNLALEMAACIT
PANFGVLGYMASRSDTLGQVVEYIAKFHRLVIDGAQVIPIQIEQDASKIRLYWPLVDDSNILLSELTLAAMVQLAKQIAP
VHEFLLQHVEFVHRARGAVVHYQRFFQCKLSFERPYYALTFASESLNVRPQHADPTLVQLLVKQAEEALVQRKIHADLVQ
QIHWIVQEYFKHKQQAPKIEDIAIELNVSVRSLQRQLQALNTSFKLILDAERMKRCEILLSQNESLTAIADQLGYSDQSA
LARAYKNLTGQTLLTRKKQLQLIQKNATK
>Mature_349_residues
MQEFTISNGYFYLWNTYLKEKGIDWQTLNLSEIQTRQVQNILSASIDAQSSLDLFIELLEITETRLHVTNLALEMAACIT
PANFGVLGYMASRSDTLGQVVEYIAKFHRLVIDGAQVIPIQIEQDASKIRLYWPLVDDSNILLSELTLAAMVQLAKQIAP
VHEFLLQHVEFVHRARGAVVHYQRFFQCKLSFERPYYALTFASESLNVRPQHADPTLVQLLVKQAEEALVQRKIHADLVQ
QIHWIVQEYFKHKQQAPKIEDIAIELNVSVRSLQRQLQALNTSFKLILDAERMKRCEILLSQNESLTAIADQLGYSDQSA
LARAYKNLTGQTLLTRKKQLQLIQKNATK

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39994; Mature: 39994

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEFTISNGYFYLWNTYLKEKGIDWQTLNLSEIQTRQVQNILSASIDAQSSLDLFIELLE
CCCEEECCCEEEEEEHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ITETRLHVTNLALEMAACITPANFGVLGYMASRSDTLGQVVEYIAKFHRLVIDGAQVIPI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
QIEQDASKIRLYWPLVDDSNILLSELTLAAMVQLAKQIAPVHEFLLQHVEFVHRARGAVV
EEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
HYQRFFQCKLSFERPYYALTFASESLNVRPQHADPTLVQLLVKQAEEALVQRKIHADLVQ
HHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIHWIVQEYFKHKQQAPKIEDIAIELNVSVRSLQRQLQALNTSFKLILDAERMKRCEILL
HHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHH
SQNESLTAIADQLGYSDQSALARAYKNLTGQTLLTRKKQLQLIQKNATK
CCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQEFTISNGYFYLWNTYLKEKGIDWQTLNLSEIQTRQVQNILSASIDAQSSLDLFIELLE
CCCEEECCCEEEEEEHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ITETRLHVTNLALEMAACITPANFGVLGYMASRSDTLGQVVEYIAKFHRLVIDGAQVIPI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
QIEQDASKIRLYWPLVDDSNILLSELTLAAMVQLAKQIAPVHEFLLQHVEFVHRARGAVV
EEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
HYQRFFQCKLSFERPYYALTFASESLNVRPQHADPTLVQLLVKQAEEALVQRKIHADLVQ
HHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QIHWIVQEYFKHKQQAPKIEDIAIELNVSVRSLQRQLQALNTSFKLILDAERMKRCEILL
HHHHHHHHHHHHHHHCCCHHHEEEEECCHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHH
SQNESLTAIADQLGYSDQSALARAYKNLTGQTLLTRKKQLQLIQKNATK
CCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]