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The map label for this gene is rsmC [H]

Identifier: 213157853

GI number: 213157853

Start: 3444134

End: 3444514

Strand: Direct

Name: rsmC [H]

Synonym: AB57_3340

Alternate gene names: 213157853

Gene position: 3444134-3444514 (Clockwise)

Preceding gene: 213157852

Following gene: 213157854

Centisome position: 85.03

GC content: 40.42

Gene sequence:

>381_bases
TTGGCAAAAGCAAATTCAAGTAATATTATCCATGCCCTAGATATTGATGCCTTCGCTTTACAGTCAACGGAAATGACTTT
TAGTCGAAATGGAATAGGTTCAGACCAGTTGAGATTGCAGCCTGTTACAGGAATTGCAGACGCCCCAACAGAACTTGATG
CCATTGTCAGTAATCCTCCCTTCCATCAGGGTATTCATACCAACTATGATGCAAGTGAAGGACTCTGCCAGAACGCTAAA
AAACATTTAAAGGCATCAGGTGAGCTATGGATTGTAGCGAACCGTTTTTTAAACTATCCGATCTTAATTGAGAAGCACTT
TGGTCAGTGTGAGATTAAAACTGATCTTCAAGGCTTTAAGGTGTTATATGCCTGTGCATAA

Upstream 100 bases:

>100_bases
TTTAGATGTCGGAACTGCTGTTTTACTCCCTTATCTAAATCAGGTGAAATCAGGTAGAATTGCCGACTTCGGGTGTGGAG
CTGGAATTATCAGTTGCTAT

Downstream 100 bases:

>100_bases
CAAACTATGTAAGGAATCTCCATGAGCGAAACACATGCTCCTGAAAAACTCCAGCGTAAGCTTGGGGCTCGTCATCTGAA
TATGATCGCCATTGGTGGTT

Product: ribosomal RNA small subunit methyltransferase C

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASEGLCQNAK
KHLKASGELWIVANRFLNYPILIEKHFGQCEIKTDLQGFKVLYACA

Sequences:

>Translated_126_residues
MAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASEGLCQNAK
KHLKASGELWIVANRFLNYPILIEKHFGQCEIKTDLQGFKVLYACA
>Mature_125_residues
AKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASEGLCQNAKK
HLKASGELWIVANRFLNYPILIEKHFGQCEIKTDLQGFKVLYACA

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=111, Percent_Identity=36.036036036036, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 13830; Mature: 13699

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPP
CCCCCCCCEEEEECCCEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCC
FHQGIHTNYDASEGLCQNAKKHLKASGELWIVANRFLNYPILIEKHFGQCEIKTDLQGFK
CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCEEEEECCCEEEEEECCCCEE
VLYACA
EEEEEC
>Mature Secondary Structure 
AKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPP
CCCCCCCEEEEECCCEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCC
FHQGIHTNYDASEGLCQNAKKHLKASGELWIVANRFLNYPILIEKHFGQCEIKTDLQGFK
CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCEEEEECCCEEEEEECCCCEE
VLYACA
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA