Click here to switch to the map view.

The map label for this gene is amtB [C]

Identifier: 213157691

GI number: 213157691

Start: 3295011

End: 3296198

Strand: Direct

Name: amtB [C]

Synonym: AB57_3170

Alternate gene names: 213157691

Gene position: 3295011-3296198 (Clockwise)

Preceding gene: 213157690

Following gene: 213157692

Centisome position: 81.35

GC content: 45.37

Gene sequence:

>1188_bases
ATGCAAAATGTAGATCTGTTTTTCTTATTACTTGGTGCAGTTTTGGTTCTTGCCATGCACGCAGGTTTTGCATTCTTGGA
ACTTGGTACAGTTCGCCACAAAAATCAGGTGAACGCGCTTAGTAAAATTCTGACTGACTTTGCCCTCTCCGCAATCGCAT
ATTTCTTTGTTGGCTACTACATTTCGTATGGCCAGCACTTCTTCCATGAAGGTACGGTTTTATCCAATGACCATGGCTAT
AACCTCATGCGTTGCTTTTTCTTACTCACTTTTGCTGCGGCCATTCCTGCCATCATTTCTGGCGGTATTGCAGAACGCGC
AAAAATGCGTTCACAAGCGATTGCCACACTCGCATTGGTTGCACTGGTTTATCCGTTCTTTGAGGGAATGGTCTGGAATG
GCAACTACGGTCTGCAAAAGTGGTTAGAAACAACTTTTGGCGCAGCTTTTCATGACTTTGCGGGTTCAGTCGTAGTTCAT
GCCATGGGCGGTTGGATAGCACTTGCTGCTGTCATTTTATTGGGCGCACGTTCTGGCCGTTATAAGAAAGATGGTCGTGT
AAGTGCTCACCCACCTTCTTCTATTCCATTTTTGGCGCTTGGTTCATGGATTTTGATTGTAGGCTGGTTTGGCTTTAATG
TGATGAGTGCTCAGCGTGTTGATGCAATCTCTGGTCTCGTTGCGATTAACTCACTTATGGCAATGGTTGGCGGTACAATT
ACAGCAAATGCGATTGGGAAAAATGACCCTGGTTTCTTACACAACGGTCCACTTGCGGGTTTAGTCGCTATTTGCGCAGG
TTCTGACATTGTTCATCCAGTCAGTGCACTTGTGATTGGTGGTGCAGCGGGTGCTATGTTCGTGTATCTATTCACCTATA
CTCAAAACAAACTCAAAGTTGATGACGTTCTTGGTGTCTGGCCGCTACATGGTGTATGCGGTGCATTTGGTGGAATTGCC
GTAGGTATTTTTGGTCAAAAATGGCTAGGTGGTTTAGGCGGCGTATCATTCATCTCTCAGCTCATCGGTACAGCACTCGC
GATTGCTATTGCACTGGCTGGCGGTTTCATTGTTTATGGCATCCTTAAAGCGACCATAGGCATTCGCCTATCTCAAGAAG
ATGAGTTCCGTGGTGCAGACTTATCTATTCATAAGATCTCAGCAAACTCTGAAGAAGGTATGTTTTAA

Upstream 100 bases:

>100_bases
CGACAAACTTAGGTTTTTAGATTCCTTAAATCTATTTTGGTGCAATTTACAGACCCAGATTTGTTCCAAAATGGAATTTA
GCACTTTTTTCGAGCATGCT

Downstream 100 bases:

>100_bases
TACTTTCTAAAGTGCTTAAGGCGACGATACTATTCGTCGCTTTTTTATTTTTTAAGGAAAATTGAACTTCTTTCACCAGT
ATAGTTTAAGAGCAATTTAA

Product: ammonium transporter

Products: NH3 [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQNVDLFFLLLGAVLVLAMHAGFAFLELGTVRHKNQVNALSKILTDFALSAIAYFFVGYYISYGQHFFHEGTVLSNDHGY
NLMRCFFLLTFAAAIPAIISGGIAERAKMRSQAIATLALVALVYPFFEGMVWNGNYGLQKWLETTFGAAFHDFAGSVVVH
AMGGWIALAAVILLGARSGRYKKDGRVSAHPPSSIPFLALGSWILIVGWFGFNVMSAQRVDAISGLVAINSLMAMVGGTI
TANAIGKNDPGFLHNGPLAGLVAICAGSDIVHPVSALVIGGAAGAMFVYLFTYTQNKLKVDDVLGVWPLHGVCGAFGGIA
VGIFGQKWLGGLGGVSFISQLIGTALAIAIALAGGFIVYGILKATIGIRLSQEDEFRGADLSIHKISANSEEGMF

Sequences:

>Translated_395_residues
MQNVDLFFLLLGAVLVLAMHAGFAFLELGTVRHKNQVNALSKILTDFALSAIAYFFVGYYISYGQHFFHEGTVLSNDHGY
NLMRCFFLLTFAAAIPAIISGGIAERAKMRSQAIATLALVALVYPFFEGMVWNGNYGLQKWLETTFGAAFHDFAGSVVVH
AMGGWIALAAVILLGARSGRYKKDGRVSAHPPSSIPFLALGSWILIVGWFGFNVMSAQRVDAISGLVAINSLMAMVGGTI
TANAIGKNDPGFLHNGPLAGLVAICAGSDIVHPVSALVIGGAAGAMFVYLFTYTQNKLKVDDVLGVWPLHGVCGAFGGIA
VGIFGQKWLGGLGGVSFISQLIGTALAIAIALAGGFIVYGILKATIGIRLSQEDEFRGADLSIHKISANSEEGMF
>Mature_395_residues
MQNVDLFFLLLGAVLVLAMHAGFAFLELGTVRHKNQVNALSKILTDFALSAIAYFFVGYYISYGQHFFHEGTVLSNDHGY
NLMRCFFLLTFAAAIPAIISGGIAERAKMRSQAIATLALVALVYPFFEGMVWNGNYGLQKWLETTFGAAFHDFAGSVVVH
AMGGWIALAAVILLGARSGRYKKDGRVSAHPPSSIPFLALGSWILIVGWFGFNVMSAQRVDAISGLVAINSLMAMVGGTI
TANAIGKNDPGFLHNGPLAGLVAICAGSDIVHPVSALVIGGAAGAMFVYLFTYTQNKLKVDDVLGVWPLHGVCGAFGGIA
VGIFGQKWLGGLGGVSFISQLIGTALAIAIALAGGFIVYGILKATIGIRLSQEDEFRGADLSIHKISANSEEGMF

Specific function: Involved In The Uptake Of Ammonia (Probable). [C]

COG id: COG0004

COG function: function code P; Ammonia permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI1786656, Length=407, Percent_Identity=31.4496314496315, Blast_Score=136, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32564042, Length=421, Percent_Identity=30.166270783848, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17550180, Length=420, Percent_Identity=29.0476190476191, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17550182, Length=434, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI133931100, Length=432, Percent_Identity=27.7777777777778, Blast_Score=108, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6324187, Length=404, Percent_Identity=27.2277227722772, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325396, Length=349, Percent_Identity=23.4957020057307, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6321559, Length=408, Percent_Identity=23.0392156862745, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161078314, Length=417, Percent_Identity=30.6954436450839, Blast_Score=122, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 41803; Mature: 41803

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS01219 AMMONIUM_TRANSP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCEECCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure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HHHHHHCCEECCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NH3 [Periplasm] [C]

Specific reaction: NH3 [Periplasm] = NH3 [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]