Click here to switch to the map view.

The map label for this gene is bfrD [H]

Identifier: 213157566

GI number: 213157566

Start: 2345504

End: 2346382

Strand: Reverse

Name: bfrD [H]

Synonym: AB57_2258

Alternate gene names: 213157566

Gene position: 2346382-2345504 (Counterclockwise)

Preceding gene: 213157573

Following gene: 213157565

Centisome position: 57.93

GC content: 40.27

Gene sequence:

>879_bases
ATGAAGCGTTCAGTTTTATTTATTTCATCAGTTGGGGTTATGACAAGCCATGTATATGCTCTGGAAGCAGATCAACAGGC
AGTAACCAACCTTCCAACAATTTCAGTTAAAGCTGATAAGGAAATCAGTTTAAAACAAGAAGTGGGGCAAGCATCAAGTG
CAACTAAAGGACTTATGCAATTAAAAGATGTCCCTCAAATTGTAAACGTTGTACCCAAACAAGTTTTAAGAGAACAGACA
GTTACCTCTATGCAAGGCGCCTTGCAAAACGTTGCAGGTTTAAGCTTTAGTGTAGGAGATGGACAACGTGATCAGGTCAT
GATTCGTGGTTTCTCTGCAATCACCGATAACTATGTAGATGGTATTCGCGATGACGCATTGTATTTTCGCGATATGTCGA
ATGTAGAGCGGATCGAAGTTTTAAAAGGACCTGCTTCGGTATTATATGGACGTGGTTCGGCAGGTGGTTTAGTTAACAAG
ATTAATAAAAAACCAATGGATCAATCTTTGCGTGAAGTGAGCTTGATTGGTAGTACAACAGGGCAACGCCGCGCAGAAGT
CGATGTAAATGAAAAAGTCGCAGAGAATGTTAAGGTTCGTCTAACTGGTGCAGTTGAAGATTCAGATGGTTACCGTGATC
AGGCTTTTTTAAAACGTCAAGCGGTTGCTCCATCTGTACAGTGGGATATTACTGATAAGACAAAACTTTTACTTCAGGCT
GACTATTTGCATGATAACCGTTTGGCAGATCAAGGTTTCCCAACAGACCCGATTACAGGTAAACCTGTTAAAACAAATCC
TAAAATTTTTTATGGTGCTTTAATGGTAAAGAGGTTGGGGATGTTGACACTGAAATCTCAAGCCAAACTATCAGCTTAG

Upstream 100 bases:

>100_bases
TTTTAATAAATATTATCAATTAATAATGATTCTTGCTAATATTTACAAATCTATACTGTTTCATTGAAACTTCGCCTGAA
ATTTTTCGTAGCGAACTTAT

Downstream 100 bases:

>100_bases
ACCATGAGTTTAATGATAATTTTAAGTATCATGGTGCAGTTCGCCACTATAACTACTCACTTGATCGTCAATATAGTGTA
GATTCACATCCAGCTGCTGA

Product: ferrichrome-iron receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKRSVLFISSVGVMTSHVYALEADQQAVTNLPTISVKADKEISLKQEVGQASSATKGLMQLKDVPQIVNVVPKQVLREQT
VTSMQGALQNVAGLSFSVGDGQRDQVMIRGFSAITDNYVDGIRDDALYFRDMSNVERIEVLKGPASVLYGRGSAGGLVNK
INKKPMDQSLREVSLIGSTTGQRRAEVDVNEKVAENVKVRLTGAVEDSDGYRDQAFLKRQAVAPSVQWDITDKTKLLLQA
DYLHDNRLADQGFPTDPITGKPVKTNPKIFYGALMVKRLGMLTLKSQAKLSA

Sequences:

>Translated_292_residues
MKRSVLFISSVGVMTSHVYALEADQQAVTNLPTISVKADKEISLKQEVGQASSATKGLMQLKDVPQIVNVVPKQVLREQT
VTSMQGALQNVAGLSFSVGDGQRDQVMIRGFSAITDNYVDGIRDDALYFRDMSNVERIEVLKGPASVLYGRGSAGGLVNK
INKKPMDQSLREVSLIGSTTGQRRAEVDVNEKVAENVKVRLTGAVEDSDGYRDQAFLKRQAVAPSVQWDITDKTKLLLQA
DYLHDNRLADQGFPTDPITGKPVKTNPKIFYGALMVKRLGMLTLKSQAKLSA
>Mature_292_residues
MKRSVLFISSVGVMTSHVYALEADQQAVTNLPTISVKADKEISLKQEVGQASSATKGLMQLKDVPQIVNVVPKQVLREQT
VTSMQGALQNVAGLSFSVGDGQRDQVMIRGFSAITDNYVDGIRDDALYFRDMSNVERIEVLKGPASVLYGRGSAGGLVNK
INKKPMDQSLREVSLIGSTTGQRRAEVDVNEKVAENVKVRLTGAVEDSDGYRDQAFLKRQAVAPSVQWDITDKTKLLLQA
DYLHDNRLADQGFPTDPITGKPVKTNPKIFYGALMVKRLGMLTLKSQAKLSA

Specific function: Probably involved in iron transport [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=214, Percent_Identity=33.1775700934579, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1786344, Length=203, Percent_Identity=29.064039408867, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787344, Length=247, Percent_Identity=25.1012145748988, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 31899; Mature: 31899

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSVLFISSVGVMTSHVYALEADQQAVTNLPTISVKADKEISLKQEVGQASSATKGLMQ
CCCEEEEEEHHHHHHHEEEEEECCHHHHHCCCEEEEECCCCCHHHHHHCCHHHHHHHHHH
LKDVPQIVNVVPKQVLREQTVTSMQGALQNVAGLSFSVGDGQRDQVMIRGFSAITDNYVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEHHHHHHHHHHH
GIRDDALYFRDMSNVERIEVLKGPASVLYGRGSAGGLVNKINKKPMDQSLREVSLIGSTT
CCCHHHHHHHCCCCCHHHHHCCCCHHHEECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCC
GQRRAEVDVNEKVAENVKVRLTGAVEDSDGYRDQAFLKRQAVAPSVQWDITDKTKLLLQA
CCCEEECCCHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCEEEEEEE
DYLHDNRLADQGFPTDPITGKPVKTNPKIFYGALMVKRLGMLTLKSQAKLSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MKRSVLFISSVGVMTSHVYALEADQQAVTNLPTISVKADKEISLKQEVGQASSATKGLMQ
CCCEEEEEEHHHHHHHEEEEEECCHHHHHCCCEEEEECCCCCHHHHHHCCHHHHHHHHHH
LKDVPQIVNVVPKQVLREQTVTSMQGALQNVAGLSFSVGDGQRDQVMIRGFSAITDNYVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEHHHHHHHHHHH
GIRDDALYFRDMSNVERIEVLKGPASVLYGRGSAGGLVNKINKKPMDQSLREVSLIGSTT
CCCHHHHHHHCCCCCHHHHHCCCCHHHEECCCCCCCHHHHHCCCCHHHHHHHHHHHCCCC
GQRRAEVDVNEKVAENVKVRLTGAVEDSDGYRDQAFLKRQAVAPSVQWDITDKTKLLLQA
CCCEEECCCHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCEEEEEEE
DYLHDNRLADQGFPTDPITGKPVKTNPKIFYGALMVKRLGMLTLKSQAKLSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]