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The map label for this gene is rpiA [H]

Identifier: 213157559

GI number: 213157559

Start: 2335408

End: 2336079

Strand: Reverse

Name: rpiA [H]

Synonym: AB57_2251

Alternate gene names: 213157559

Gene position: 2336079-2335408 (Counterclockwise)

Preceding gene: 213157563

Following gene: 213157557

Centisome position: 57.67

GC content: 39.29

Gene sequence:

>672_bases
ATGAGCCTATATGCAACCCAAGATGAAAAGAAACAAGCTGCTGCGAAAGCTGCTTTAAAACACTTACCCAAAGGTGGCAT
TTTGGGGGTAGGAACTGGAAGTACTGTAAATTTCCTGATTGATTTATTGCCTGAACTACAATTAGAAGCAGCAGTAGCAA
GTTCTCAAGCAACAGCAGATCGTCTTAAAAAATTAGGCATAGAAGTGGTTGATATGAACCATGTGGGTAGCCTTGATGCT
TATGTTGATGGTGCAGATGAGATTGATCGTCACATGCATATGATTAAAGGCGGCGGCGCAGCATTAACTCGTGAAAAAAT
TGTAGCCTCAATTGCTAAAAAGTTTGTATGTATCGTTGATGATTCAAAATGGGTTGATCAACTTGGTCGTGATTTCCCAT
TACCAGTAGAAGTGATTCCAATGGCGCGTTCTGCTGTAGCTCGTAAATTAGTAAGCTTAGGGGGTGATCCGGTTTATCGT
GAAGGTGTGGTAACAGATAACGGAAACGTTATTTTAGATGTATTTAATTTGAACATCTTAAATGCAATTGATTTGGAAAA
GACAATTAATAATATTCCGGGCGTTGTGACTAACGGTATTTTTGCGTTAAATCCAGCAACGATTGCAATTGTTGCAACAA
ATGATGGTATTGAAGAGCGTACTGCACAGTAA

Upstream 100 bases:

>100_bases
TTCCCTATAACAGTTTAAAATAGGAAATTATTGTAGCAAACCCTTGTGCATTTGCGCCGTTTATTGGCGCATAAATGTCA
AAAAATAGTTGAGTGATGTA

Downstream 100 bases:

>100_bases
TGTCTGTGGAAATGCCAGAAATTAAAATTGTTCGTCACGTAAGGGCAAGAAAATTGCGCTTACGTGTTAAGCCTGCGTCT
ATACGACTTACTGTGCCGTT

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATADRLKKLGIEVVDMNHVGSLDA
YVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYR
EGVVTDNGNVILDVFNLNILNAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ

Sequences:

>Translated_223_residues
MSLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATADRLKKLGIEVVDMNHVGSLDA
YVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYR
EGVVTDNGNVILDVFNLNILNAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ
>Mature_222_residues
SLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATADRLKKLGIEVVDMNHVGSLDAY
VDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVDDSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYRE
GVVTDNGNVILDVFNLNILNAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=231, Percent_Identity=35.0649350649351, Blast_Score=105, Evalue=2e-23,
Organism=Escherichia coli, GI1789280, Length=215, Percent_Identity=62.7906976744186, Blast_Score=257, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI17551758, Length=216, Percent_Identity=36.1111111111111, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324669, Length=243, Percent_Identity=30.4526748971193, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI281364072, Length=193, Percent_Identity=35.7512953367876, Blast_Score=98, Evalue=4e-21,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 23708; Mature: 23576

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATAD
CCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKKLGIEVVDMNHVGSLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVD
HHHHCCCEEEECCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEC
DSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYREGVVTDNGNVILDVFNLNIL
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCH
NAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ
HHHHHHHHHHHCCCHHHCCEEEECCEEEEEEEECCCCHHHCCC
>Mature Secondary Structure 
SLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATAD
CCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLKKLGIEVVDMNHVGSLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVD
HHHHCCCEEEECCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEC
DSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYREGVVTDNGNVILDVFNLNIL
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCH
NAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ
HHHHHHHHHHHCCCHHHCCEEEECCEEEEEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA