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The map label for this gene is ycaC [H]

Identifier: 213157463

GI number: 213157463

Start: 2233869

End: 2234510

Strand: Direct

Name: ycaC [H]

Synonym: AB57_2152

Alternate gene names: 213157463

Gene position: 2233869-2234510 (Clockwise)

Preceding gene: 213157459

Following gene: 213157464

Centisome position: 55.15

GC content: 39.41

Gene sequence:

>642_bases
ATGACTAGTGAAAACATCCGTGACCCAAAACAAGATCATCTTTTAACTCCAGAAAACTCTGCTTTTATTGTCATTGATTA
TCAACCGGTTCAAGTAAACTCCATTGCTTCGATGGATCGTCAACTGTTGATTAATAATATTGTAGGCACGGCAAAAGCTG
CCATTGTTTATAATTTGCCAATTATCCATTCAACCGTAAATGTTAAGACTGGTTTAAATAAACCACCGATTCCACAATTG
AGTAAGGTTTTGAAAGATTATCCTACCTATGACCGTACAAGTATTAACTCTTGGGAAGATACCGAATTTAAAGAAGCCGT
AAAAGCAACAGGCCGTAGAAAACTCATTATGACAGCGCTTTGGACTGAAGCTTGCTTAACATTTCCTGCACTAGACGCCC
TAGCTGAAGGATATGAAGTATATGTTGTGGTAGATGCTGTAGGTGGTACTTCTGTTGCAGCGCATGAAGCTGCTTTACGC
CGTATTGAACAAGCAGGCGGCAAAATGATCAGTGTCGCTCAGTTATTCTGTGAACTGCAACGTGATTGGAAACGTTCAGA
AACTGTACCTCAATTTATGAAATTATTTATTGAGACTGGTGGTACAGCGGGTATCCAATTCTCTTACGACAAAGCTGAAT
AA

Upstream 100 bases:

>100_bases
CCGTCCTTTCTCACTTAATTATATAGTTCATAAGTGACCAAACTTATGGCACAAAAATAATATTTGTATTATTTAATTAT
ATTTAATAAAGGTGAAAAAA

Downstream 100 bases:

>100_bases
AAGTTTTGTATTGTCCCTATTTAAAGGATACACATTAAAATGAGTGCTGTTTATTTAGTAGTGGGACTTCGAGCAAAACC
AGAAAAGATTGATCAGGTCA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTSENIRDPKQDHLLTPENSAFIVIDYQPVQVNSIASMDRQLLINNIVGTAKAAIVYNLPIIHSTVNVKTGLNKPPIPQL
SKVLKDYPTYDRTSINSWEDTEFKEAVKATGRRKLIMTALWTEACLTFPALDALAEGYEVYVVVDAVGGTSVAAHEAALR
RIEQAGGKMISVAQLFCELQRDWKRSETVPQFMKLFIETGGTAGIQFSYDKAE

Sequences:

>Translated_213_residues
MTSENIRDPKQDHLLTPENSAFIVIDYQPVQVNSIASMDRQLLINNIVGTAKAAIVYNLPIIHSTVNVKTGLNKPPIPQL
SKVLKDYPTYDRTSINSWEDTEFKEAVKATGRRKLIMTALWTEACLTFPALDALAEGYEVYVVVDAVGGTSVAAHEAALR
RIEQAGGKMISVAQLFCELQRDWKRSETVPQFMKLFIETGGTAGIQFSYDKAE
>Mature_212_residues
TSENIRDPKQDHLLTPENSAFIVIDYQPVQVNSIASMDRQLLINNIVGTAKAAIVYNLPIIHSTVNVKTGLNKPPIPQLS
KVLKDYPTYDRTSINSWEDTEFKEAVKATGRRKLIMTALWTEACLTFPALDALAEGYEVYVVVDAVGGTSVAAHEAALRR
IEQAGGKMISVAQLFCELQRDWKRSETVPQFMKLFIETGGTAGIQFSYDKAE

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=171, Percent_Identity=35.0877192982456, Blast_Score=120, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23650; Mature: 23519

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSENIRDPKQDHLLTPENSAFIVIDYQPVQVNSIASMDRQLLINNIVGTAKAAIVYNLP
CCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
IIHSTVNVKTGLNKPPIPQLSKVLKDYPTYDRTSINSWEDTEFKEAVKATGRRKLIMTAL
EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
WTEACLTFPALDALAEGYEVYVVVDAVGGTSVAAHEAALRRIEQAGGKMISVAQLFCELQ
HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RDWKRSETVPQFMKLFIETGGTAGIQFSYDKAE
HHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure 
TSENIRDPKQDHLLTPENSAFIVIDYQPVQVNSIASMDRQLLINNIVGTAKAAIVYNLP
CCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
IIHSTVNVKTGLNKPPIPQLSKVLKDYPTYDRTSINSWEDTEFKEAVKATGRRKLIMTAL
EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
WTEACLTFPALDALAEGYEVYVVVDAVGGTSVAAHEAALRRIEQAGGKMISVAQLFCELQ
HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RDWKRSETVPQFMKLFIETGGTAGIQFSYDKAE
HHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]