Click here to switch to the map view.

The map label for this gene is 213157443

Identifier: 213157443

GI number: 213157443

Start: 2215098

End: 2215976

Strand: Direct

Name: 213157443

Synonym: AB57_2132

Alternate gene names: NA

Gene position: 2215098-2215976 (Clockwise)

Preceding gene: 213157441

Following gene: 213157445

Centisome position: 54.69

GC content: 39.14

Gene sequence:

>879_bases
ATGGAAATTAAAGTACTGGTAGATGTAAAAACAAAACTTGGAGAATGCCCAACTTGGGATGCTGTTCGCCAACGCCTATT
TTGGGTAGATATTGTTGATGGACGATTATTCTGTTGTGATGAATTCGGTGGGAATATACGGGCGTGGGAAGTTCATAAAA
AAATAGGTTCTTTTGCTTTACAAGAAAATTATAACGGCGCAATTGTTGCGCTCGAAGACGGGTTATATCAACTCGACTTT
GACACAGGCAACTTAAAATTTATTTGCAACCCTGAACCAGACCTACCTCAAAATAGATTAAATGATGGTCGTGTTGATCG
GCAAGGTCGATTCGTTTTTGGTTCTATGAACCGCCTTGAAGATGGAAATACCGCGTCTCTCTATCGATTAGATGCAGATT
ATAAAATAGAAAAATTAGAAAATAATATTAATACTTCAAATAGTATTTGCTGGAGTCCTGATGGTGCTAAGCTCTATTTT
GCAGACACATGGCAAGGTGAAATCTGGTCTTATGATTATGATCTTGAAACAGGGCAAATCTCAAATAAAACCATTTTTTG
TAAGATAGATACATCAGACGGTGGTTCAGCAGATGGCTCGACAGTAGATCGTGAAGGTTATTTATGGAATGCAAAAGTAT
ATTCGGGTCAGTTAGTACGTTATCGTCCTGATGGACAAATCGACCGTATTATTGAAATGCCTGTAAAAAAAATTACCAGT
GCAGTTTTTGGCGGAAAAAATCTTGATGTCTTGTTTGTTACCTCTATGTCGCAACCGCCTCTTCCGAGGTTCCCTGATGA
CAACCAATTGCGAGGCAGTGTTTTTGCCATTTATGGGCTAGGCATTCAAGGATTAGCCGATGCTCGATTTATGGGGTAA

Upstream 100 bases:

>100_bases
CTTATTAGGCAAAGAAAAATTTTCATTGGTTTTTATATTTGGCTTTCATTAATTTAGTTTCATCGATGAATGACTGAATA
AAAGGACTAAAAAAGGAATT

Downstream 100 bases:

>100_bases
TGACTCACTTCCTACAAGAAATACTTAACTATAAAAGATAGTGAACCAGCTCTGCAGCTCAATAAGGAAATCTTTATTAA
GCTGCATCAAGAATTAATTA

Product: senescence marker protein-30

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MEIKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFALQENYNGAIVALEDGLYQLDF
DTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADYKIEKLENNINTSNSICWSPDGAKLYF
ADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDGGSADGSTVDREGYLWNAKVYSGQLVRYRPDGQIDRIIEMPVKKITS
AVFGGKNLDVLFVTSMSQPPLPRFPDDNQLRGSVFAIYGLGIQGLADARFMG

Sequences:

>Translated_292_residues
MEIKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFALQENYNGAIVALEDGLYQLDF
DTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADYKIEKLENNINTSNSICWSPDGAKLYF
ADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDGGSADGSTVDREGYLWNAKVYSGQLVRYRPDGQIDRIIEMPVKKITS
AVFGGKNLDVLFVTSMSQPPLPRFPDDNQLRGSVFAIYGLGIQGLADARFMG
>Mature_292_residues
MEIKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFALQENYNGAIVALEDGLYQLDF
DTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADYKIEKLENNINTSNSICWSPDGAKLYF
ADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDGGSADGSTVDREGYLWNAKVYSGQLVRYRPDGQIDRIIEMPVKKITS
AVFGGKNLDVLFVTSMSQPPLPRFPDDNQLRGSVFAIYGLGIQGLADARFMG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=302, Percent_Identity=29.4701986754967, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI4759036, Length=302, Percent_Identity=29.4701986754967, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI45551448, Length=306, Percent_Identity=31.3725490196078, Blast_Score=130, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24641471, Length=306, Percent_Identity=31.3725490196078, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI18860103, Length=306, Percent_Identity=31.3725490196078, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24641469, Length=306, Percent_Identity=31.3725490196078, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24646912, Length=303, Percent_Identity=31.6831683168317, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24646910, Length=303, Percent_Identity=31.6831683168317, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32923; Mature: 32923

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFAL
CEEEEEEEEHHHCCCCCCHHHHHHEEEEEEEECCEEEEEECCCCCEEEEEEHHHHCCEEE
QENYNGAIVALEDGLYQLDFDTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLE
ECCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
DGNTASLYRLDADYKIEKLENNINTSNSICWSPDGAKLYFADTWQGEIWSYDYDLETGQI
CCCCEEEEEECCCCEEEEHHCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCC
SNKTIFCKIDTSDGGSADGSTVDREGYLWNAKVYSGQLVRYRPDGQIDRIIEMPVKKITS
CCCEEEEEEECCCCCCCCCCEECCCCEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHH
AVFGGKNLDVLFVTSMSQPPLPRFPDDNQLRGSVFAIYGLGIQGLADARFMG
HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MEIKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFAL
CEEEEEEEEHHHCCCCCCHHHHHHEEEEEEEECCEEEEEECCCCCEEEEEEHHHHCCEEE
QENYNGAIVALEDGLYQLDFDTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLE
ECCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
DGNTASLYRLDADYKIEKLENNINTSNSICWSPDGAKLYFADTWQGEIWSYDYDLETGQI
CCCCEEEEEECCCCEEEEHHCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEECCCCCCC
SNKTIFCKIDTSDGGSADGSTVDREGYLWNAKVYSGQLVRYRPDGQIDRIIEMPVKKITS
CCCEEEEEEECCCCCCCCCCEECCCCEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHH
AVFGGKNLDVLFVTSMSQPPLPRFPDDNQLRGSVFAIYGLGIQGLADARFMG
HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA