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The map label for this gene is nahR [H]

Identifier: 213157271

GI number: 213157271

Start: 2048658

End: 2049488

Strand: Direct

Name: nahR [H]

Synonym: AB57_1959

Alternate gene names: 213157271

Gene position: 2048658-2049488 (Clockwise)

Preceding gene: 213157270

Following gene: 213157277

Centisome position: 50.58

GC content: 36.7

Gene sequence:

>831_bases
ATGGCTGCAGATGCCATTGGTTTGACACAGCCGAGCGTTAGTAATGGTCTAAACAAAATCCGCCAACATTTTAATGATCC
TTTGTTTATTCGAGTCGGCAATGAAATGATTCCGACTGAACTGGCAAAGCAAATTTTTCCACTCATTAGCGAAGTTATTG
ATAAGGTTGAAAGCATTAATAATTTTAATGTGAACTTTGATCCCTTGACCTCAGATCAGTTGTTTACGATTGCGATGACT
GATGTATCTCATTTGGTTTTATTGCCGCAACTAACCAATTATTTAAAAGAAAAAGCACCTTTGATTCGTTTAAATATTAG
GCCTATTACACCAGAAACTAGCTATCAAATGGCAAACGGTGAAATTGATCTAGCCATAGGTTTTTTACCGCAGTTAGAAG
AAGGTTTTTATCAGCAGAAGTTTTTTCGTCAACACTATGTCGTAATTAGCTCAAAAAGCCATCCACGTTTAGACCCAAAT
AATTTCACTTTAGAGGATTATATGCGTGAATCTCACATCGATATTGATGCGGGTATTGGGCATTATCACATTAAAAATGA
GCTGCAAAATAAAGGACTGGATCGAAATATTTTAATTCGCTTACCAAGTTATCTAGGAGTAGGATTGGTCGTTCAGGAAA
CAGATGCTATTGCCACTGTGCCATATTATTTAAGTCAGGTTTTATTGGTTAGAGAGAACTTACAGATTTTACCGGCACCG
CTTGATTTTCCTACTTATGATGTTAAGCAACATTGGCATATGTCTTGTCACCATAAGAGTAGCCATAAATGGTTCCGTCA
AACCTGTTATGAGCTATTTAAAACCGCTTAA

Upstream 100 bases:

>100_bases
TTCAATGGATTATTGAGTCCAAGCGGAGACAATTTTGTTTGATCTAGACAGTAGATTATTAAATATTTTTTATCATATTT
ATCGATTCAAAAGTGTTTCA

Downstream 100 bases:

>100_bases
GAATTTTCATTATAAAAAAGAAGATGTAGGAAAATCCTTACATCTTCTTTTAATTTTAAATTAAATTTCAATCGCAACGG
CTGTTGCTTCACCACCACCA

Product: transcriptional regulator, LysR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESINNFNVNFDPLTSDQLFTIAMT
DVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANGEIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPN
NFTLEDYMRESHIDIDAGIGHYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPAP
LDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELFKTA

Sequences:

>Translated_276_residues
MAADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESINNFNVNFDPLTSDQLFTIAMT
DVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANGEIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPN
NFTLEDYMRESHIDIDAGIGHYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPAP
LDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELFKTA
>Mature_275_residues
AADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESINNFNVNFDPLTSDQLFTIAMTD
VSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANGEIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNN
FTLEDYMRESHIDIDAGIGHYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPAPL
DFPTYDVKQHWHMSCHHKSSHKWFRQTCYELFKTA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=285, Percent_Identity=24.2105263157895, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31744; Mature: 31613

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESIN
CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
NFNVNFDPLTSDQLFTIAMTDVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANG
CCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEECCC
EIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNNFTLEDYMRESHIDIDAGIG
CEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHCCCEECCCC
HYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPAP
HHHHHHHHHHCCCCCEEEEEECHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEECC
LDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELFKTA
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESIN
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
NFNVNFDPLTSDQLFTIAMTDVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANG
CCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEECCC
EIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNNFTLEDYMRESHIDIDAGIG
CEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHCCCEECCCC
HYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPAP
HHHHHHHHHHCCCCCEEEEEECHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEECC
LDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELFKTA
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]