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The map label for this gene is cmpB [H]

Identifier: 213157262

GI number: 213157262

Start: 2037288

End: 2038142

Strand: Direct

Name: cmpB [H]

Synonym: AB57_1949

Alternate gene names: 213157262

Gene position: 2037288-2038142 (Clockwise)

Preceding gene: 213157261

Following gene: 213157263

Centisome position: 50.3

GC content: 38.83

Gene sequence:

>855_bases
ATGAGTAGTTTAGTCCAGACAAAACCTAAAAACCAAAGTACATTTTTGATTAAATTTTTTCAGCAGTTGAGATCATATCC
GGCGCATTTAAAAAACTATGCGATTGCTTTTACATCGATAGTTTTCTGGATAGCAGTTTGGCAAGGACTTGCTCAGTTTA
AAGTAAATTTAGGCTTTGTGAACTTTAGCAATGTCCCGACACCTTTAGATGTTATTCATGCACTGTGGACTTTCTTTCAA
CTCAGCACTGCATTTGAACATGTTGAATCTAGTGTTTTTCGCGTAGTAGTTGGTTTTGTATTGGCAGCTCTAATTGGTGT
AGGTATTGGTTTGTTAGCAGGACGTTATCAAAAACTTGCTGCATTTCTAATGCCGCCATTAGAAGTACTACGTCCAATTC
CAGCAGTTGCATGGATTCCTTTAGCAATTCTGATTTTTCCATCATCAGAAGCGTCTATGATTTTTATTACCTTTATCGGG
GCTTTATTTCCAATTTTATTAAACACTGTACATGGTGTTGGTGCAGTTGACCCAAGACTCGTTGCGTCAGCGAAAAGCTT
AGGTGCTTCTGATCTAGCTATCATTTATGAAGTCATTATTCCGGGGGCATTACCGAACATTATTACGGGTTTATCTATTG
GAATGGGGACTTGTTGGTTCTGTTTAGTGACTGCCGAAATGATTTCGGGTCAACACGGAATTGGATACTTCACATGGGAA
TCTTTCACCTTGCAAAACTATAGCAATATTGTGGTTGGCATGGTGCTGATAGGAGCGTTAGGTATGTTTAGCAGTACATT
GGTACGTGTGATTGGAAACCGATTTACCCCATGGTATCAACTAAGGAAATCATAA

Upstream 100 bases:

>100_bases
TGGGCTAAACAACAAGGCGGAAAAGTATATGACTTTAAAGCTATTCAGCTTGTAACCCAGAGCTGATGTGTTGTCTTACC
TAATAAGCAGGAGGTGACGA

Downstream 100 bases:

>100_bases
AATGTCAATTACACAAGGCCATGTGCGTATTCAAAATCTATCGCTACATTTAGGGCAAGTTAAAAATCGTTTTCAGGCAC
TAGATCGGGTTAATTTCGAA

Product: ABC-type nitrate/sulfonate/bicarbonate transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSSLVQTKPKNQSTFLIKFFQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFVNFSNVPTPLDVIHALWTFFQ
LSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSEASMIFITFIG
ALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQHGIGYFTWE
SFTLQNYSNIVVGMVLIGALGMFSSTLVRVIGNRFTPWYQLRKS

Sequences:

>Translated_284_residues
MSSLVQTKPKNQSTFLIKFFQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFVNFSNVPTPLDVIHALWTFFQ
LSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSEASMIFITFIG
ALFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQHGIGYFTWE
SFTLQNYSNIVVGMVLIGALGMFSSTLVRVIGNRFTPWYQLRKS
>Mature_283_residues
SSLVQTKPKNQSTFLIKFFQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFVNFSNVPTPLDVIHALWTFFQL
STAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLAAFLMPPLEVLRPIPAVAWIPLAILIFPSSEASMIFITFIGA
LFPILLNTVHGVGAVDPRLVASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQHGIGYFTWES
FTLQNYSNIVVGMVLIGALGMFSSTLVRVIGNRFTPWYQLRKS

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=244, Percent_Identity=33.1967213114754, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1786564, Length=221, Percent_Identity=31.6742081447964, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31121; Mature: 30990

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLVQTKPKNQSTFLIKFFQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
NFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLMPPLEVLRPIPAVAWIPLAILIFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRL
HHHCCHHHHHCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
VASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQHGIGYFTWE
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
SFTLQNYSNIVVGMVLIGALGMFSSTLVRVIGNRFTPWYQLRKS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure 
SSLVQTKPKNQSTFLIKFFQQLRSYPAHLKNYAIAFTSIVFWIAVWQGLAQFKVNLGFV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
NFSNVPTPLDVIHALWTFFQLSTAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLMPPLEVLRPIPAVAWIPLAILIFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRL
HHHCCHHHHHCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
VASAKSLGASDLAIIYEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQHGIGYFTWE
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
SFTLQNYSNIVVGMVLIGALGMFSSTLVRVIGNRFTPWYQLRKS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA