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The map label for this gene is lumQ [H]

Identifier: 213157255

GI number: 213157255

Start: 2029404

End: 2030258

Strand: Direct

Name: lumQ [H]

Synonym: AB57_1942

Alternate gene names: 213157255

Gene position: 2029404-2030258 (Clockwise)

Preceding gene: 213157252

Following gene: 213157256

Centisome position: 50.1

GC content: 39.65

Gene sequence:

>855_bases
ATGGCCTATCAAACTTTAGAACAGCTACAGCAATCTAAAGCCAAGCTTCACGAAACTGTGGTGCTTGATGAGAATATGCA
ACTTGCATTTTGGTCTAATCAGCAAGATCGTGTAAGTGTCTGTAGCGATCACCACACTTTAAGTCTCTATATTCAAGATG
GCTATGAAAGCTATCAAAAAACACCTGCGGGTTGGAAAAACGGCGGTGGACCGGGGCGTTTTTGCCTATTGCCTGAGCAT
CAGGAGTCGACTTGGGATATACGTGGAGGGCTTAAATTCGTTCACTTGTATTACACAGATCAACATTTGCGTGATGTTGC
TGAAAAAATATGGGACAAAGAACCCAATCAAATTGAACTAAACGAAGTTGTTTTTAACGATGACGAAAAGATTCGCGCGC
TTTATCAATTCTTCTTGCTAGATTGTGATTGGAAAGATTCAGCAAACCATTTACAAATGAGTACAACTGCCAGTTTATTG
TTGAATCACTTAATTCGAAAATATAGCAGTGTTCAATGGCAACAGCCTACTATCAAGGGTGGGCTGGCACCTCATAAACT
CAAATATATTCAGGAATGGATTGAAGATCATCTAGATCAGGCACTCACTTTGTCTGATTTGGCAAATGTTGTGAATTTAA
GCGAATACCATTTTGCTCATATGTTTAAACAGTCCATGAATATGGCGCCTCACCAATATGTCATGCAAAGACGCTTAACT
AAGGCCAAAGGACTAATTCAGTCATCTCAGCTTTCTTTGCAAGATATTGCCCTAGTATGTGGGTTTAGTTCAGCAAGCCA
TTTAAGTCATCGCTTTAAACAATTTTATGGTATGAGTCCTTCGCAGTTACGTTAA

Upstream 100 bases:

>100_bases
TGTTGTACATGCAAGATCTTGCGTTTTTTATAGATCTAAACTAGCTGAATTTTGCTGAATATGGTTAACTTAAGCTCAAT
GATATTCGTTTTAATTTTGC

Downstream 100 bases:

>100_bases
GTGTCTAATGTAATTGGTTTCTCCTGAGCTGCGTCAAATGCAGCTCTTGCCGCATCAATATCCGCAATATGCTGCTGAGC
CCATTGGCCTAAAGCAATTA

Product: transcriptional regulator, AraC type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQKTPAGWKNGGGPGRFCLLPEH
QESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIELNEVVFNDDEKIRALYQFFLLDCDWKDSANHLQMSTTASLL
LNHLIRKYSSVQWQQPTIKGGLAPHKLKYIQEWIEDHLDQALTLSDLANVVNLSEYHFAHMFKQSMNMAPHQYVMQRRLT
KAKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR

Sequences:

>Translated_284_residues
MAYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQKTPAGWKNGGGPGRFCLLPEH
QESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIELNEVVFNDDEKIRALYQFFLLDCDWKDSANHLQMSTTASLL
LNHLIRKYSSVQWQQPTIKGGLAPHKLKYIQEWIEDHLDQALTLSDLANVVNLSEYHFAHMFKQSMNMAPHQYVMQRRLT
KAKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR
>Mature_283_residues
AYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQKTPAGWKNGGGPGRFCLLPEHQ
ESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIELNEVVFNDDEKIRALYQFFLLDCDWKDSANHLQMSTTASLLL
NHLIRKYSSVQWQQPTIKGGLAPHKLKYIQEWIEDHLDQALTLSDLANVVNLSEYHFAHMFKQSMNMAPHQYVMQRRLTK
AKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790559, Length=111, Percent_Identity=32.4324324324324, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790339, Length=99, Percent_Identity=32.3232323232323, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 32990; Mature: 32859

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQK
CCHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHCCCCEEEEEEECCHHHHHC
TPAGWKNGGGPGRFCLLPEHQESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIEL
CCCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEEEEECHHHHHHHHHHHHCCCCCEEEE
NEVVFNDDEKIRALYQFFLLDCDWKDSANHLQMSTTASLLLNHLIRKYSSVQWQQPTIKG
EHEEECCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLAPHKLKYIQEWIEDHLDQALTLSDLANVVNLSEYHFAHMFKQSMNMAPHQYVMQRRLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KAKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
AYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQK
CHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHCCCCEEEEEEECCHHHHHC
TPAGWKNGGGPGRFCLLPEHQESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIEL
CCCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEEEEECHHHHHHHHHHHHCCCCCEEEE
NEVVFNDDEKIRALYQFFLLDCDWKDSANHLQMSTTASLLLNHLIRKYSSVQWQQPTIKG
EHEEECCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GLAPHKLKYIQEWIEDHLDQALTLSDLANVVNLSEYHFAHMFKQSMNMAPHQYVMQRRLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KAKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]