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The map label for this gene is rhbD [H]

Identifier: 213157197

GI number: 213157197

Start: 1971521

End: 1972141

Strand: Direct

Name: rhbD [H]

Synonym: AB57_1880

Alternate gene names: 213157197

Gene position: 1971521-1972141 (Clockwise)

Preceding gene: 213157196

Following gene: 213157199

Centisome position: 48.67

GC content: 37.04

Gene sequence:

>621_bases
ATGCTTACGCTTTCACAAAAGCTCCCAGATTATTTTGAATATATTGAAAATGATGTTAGCTACTCATTACGTCAGGTTCA
GTATCCTCAAGATATACCACTATTACACCGCTGGATGCATGAGCCACACGTTATTCCTCAGTGGCAATTAAATAAAAGCG
AAATAGAACTCAAAGTTTATTTTGAAAAAATGCTAGCTGATGATCATCAACGTTTAATGATTGTAGGAATCAATGGTCAA
GACGTGGGTTATGCCGAAATTTATGAAGGGAAACGTGATCGCCTAGCTCGTTATTATAAAGGTGAAGACAATGATTTAGG
TTGGCATTTACTATTTGGGGAGAAATCTGCTTTTGGTCAAGGCTTTTTGCGCCCAACAATTCGTTTATTGAATTTCTATA
TTTTTGAAAATTCCCCAACAAATAGAATTGTAGGAGAACCTGATCATACAGTGAAGCCTTATGCGGCTGTAGTAGAAGAC
ATGTGCTATGAAGAGCAGGGCTTAATTCCAATGCCGGAAAAAACGGCAATGTTGTATTACTGTTTCCGTGAAAAGTTCTA
TGACAGATTTTTTGAGTTATACCAGGCATCGCAACAAAAATTACAGCAAAAAGCGAGTTAA

Upstream 100 bases:

>100_bases
TGATTTATGCAATAAAAAAATAGTAAAAATAAGCTTGCATCTTAAATAAAAATGATTATCATTATCAATTATAGGTTATG
TCATAGCAAGGACCGTTATA

Downstream 100 bases:

>100_bases
TTTCTGGTATGGGTAGACCTGCAAGACATAATAAAAACAATGCAGGTTTGTTTAGCAGTAAATGGACCTAAGAAAAATAA
ACATGATCAGCGCATAAAAA

Product: rhizobactin siderophore biosynthesis protein RhbD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLTLSQKLPDYFEYIENDVSYSLRQVQYPQDIPLLHRWMHEPHVIPQWQLNKSEIELKVYFEKMLADDHQRLMIVGINGQ
DVGYAEIYEGKRDRLARYYKGEDNDLGWHLLFGEKSAFGQGFLRPTIRLLNFYIFENSPTNRIVGEPDHTVKPYAAVVED
MCYEEQGLIPMPEKTAMLYYCFREKFYDRFFELYQASQQKLQQKAS

Sequences:

>Translated_206_residues
MLTLSQKLPDYFEYIENDVSYSLRQVQYPQDIPLLHRWMHEPHVIPQWQLNKSEIELKVYFEKMLADDHQRLMIVGINGQ
DVGYAEIYEGKRDRLARYYKGEDNDLGWHLLFGEKSAFGQGFLRPTIRLLNFYIFENSPTNRIVGEPDHTVKPYAAVVED
MCYEEQGLIPMPEKTAMLYYCFREKFYDRFFELYQASQQKLQQKAS
>Mature_206_residues
MLTLSQKLPDYFEYIENDVSYSLRQVQYPQDIPLLHRWMHEPHVIPQWQLNKSEIELKVYFEKMLADDHQRLMIVGINGQ
DVGYAEIYEGKRDRLARYYKGEDNDLGWHLLFGEKSAFGQGFLRPTIRLLNFYIFENSPTNRIVGEPDHTVKPYAAVVED
MCYEEQGLIPMPEKTAMLYYCFREKFYDRFFELYQASQQKLQQKAS

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iucB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR019432 [H]

Pfam domain/function: PF10331 AlcB [H]

EC number: NA

Molecular weight: Translated: 24586; Mature: 24586

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSQKLPDYFEYIENDVSYSLRQVQYPQDIPLLHRWMHEPHVIPQWQLNKSEIELKVY
CCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
FEKMLADDHQRLMIVGINGQDVGYAEIYEGKRDRLARYYKGEDNDLGWHLLFGEKSAFGQ
HHHHHCCCCCEEEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GFLRPTIRLLNFYIFENSPTNRIVGEPDHTVKPYAAVVEDMCYEEQGLIPMPEKTAMLYY
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
CFREKFYDRFFELYQASQQKLQQKAS
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTLSQKLPDYFEYIENDVSYSLRQVQYPQDIPLLHRWMHEPHVIPQWQLNKSEIELKVY
CCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
FEKMLADDHQRLMIVGINGQDVGYAEIYEGKRDRLARYYKGEDNDLGWHLLFGEKSAFGQ
HHHHHCCCCCEEEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
GFLRPTIRLLNFYIFENSPTNRIVGEPDHTVKPYAAVVEDMCYEEQGLIPMPEKTAMLYY
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
CFREKFYDRFFELYQASQQKLQQKAS
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]