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The map label for this gene is yraR [H]

Identifier: 213157160

GI number: 213157160

Start: 1930194

End: 1930766

Strand: Direct

Name: yraR [H]

Synonym: AB57_1843

Alternate gene names: 213157160

Gene position: 1930194-1930766 (Clockwise)

Preceding gene: 213157158

Following gene: 213157161

Centisome position: 47.65

GC content: 32.46

Gene sequence:

>573_bases
ATGACTATAAGTACGAAAAAAGCAATTGTAGTAGGTGCTACAGGACTCGTTGGTTTAGCGCTTGTTGAACAACTTGAGCA
AACACCAGAATTTGAGGCCATTACCGTTGTAGTAAGAACAGAATCACAACTACTTAATACATATAAGAAAGTTACTCAGC
TCGTTATAGACGATTTTTTATTGCTCAATGATGAAGATGTGAATGGTCATACTCATGCATTTAGTTGCTTAGGTACAACT
TTAAAAATAGCGGGCTCAAAACAAGGCTTTTATGCAGTTGATTATGAGATAAATGCTCACTTTGCAGACTTAATCCAAGA
TAAACATATTCATTTTTTAATTGTTAGTGCACTTGGGGCAAATGCTAATTCGCCAATTTTCTACAATAAAGTAAAAGGAG
AATTAGAAAATTATATTCAAAGTTTAGGAATCGAAAAATTATCTATTTTTAGACCTTCTCTATTGATTGGTAAGCGTAGC
GATGTGCGTTTTATTGAAGATTTAGGACAAAGTTTATTTAAACTTATTGAAAATAAATGGACTAAGCCTTTCAATATAAA
CCAGTTACAGTAG

Upstream 100 bases:

>100_bases
TGAAGTCAAGCCTTGAGAGCATTTTAAGCGGTTTTAGGGGCTGCTAAAACCGTAAGAAAAGGTTAAATTTGATACAAACT
TAAAGAGGGTTGGATAAAAA

Downstream 100 bases:

>100_bases
AGCAATTGGCTCATACCATGGTCGTAGCGGCACTAACGCAAATTGAAGCTTTTAAACGATATGATAATCTCAGCATACAA
CAAACTCGATAAGGGAGAAT

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTISTKKAIVVGATGLVGLALVEQLEQTPEFEAITVVVRTESQLLNTYKKVTQLVIDDFLLLNDEDVNGHTHAFSCLGTT
LKIAGSKQGFYAVDYEINAHFADLIQDKHIHFLIVSALGANANSPIFYNKVKGELENYIQSLGIEKLSIFRPSLLIGKRS
DVRFIEDLGQSLFKLIENKWTKPFNINQLQ

Sequences:

>Translated_190_residues
MTISTKKAIVVGATGLVGLALVEQLEQTPEFEAITVVVRTESQLLNTYKKVTQLVIDDFLLLNDEDVNGHTHAFSCLGTT
LKIAGSKQGFYAVDYEINAHFADLIQDKHIHFLIVSALGANANSPIFYNKVKGELENYIQSLGIEKLSIFRPSLLIGKRS
DVRFIEDLGQSLFKLIENKWTKPFNINQLQ
>Mature_189_residues
TISTKKAIVVGATGLVGLALVEQLEQTPEFEAITVVVRTESQLLNTYKKVTQLVIDDFLLLNDEDVNGHTHAFSCLGTTL
KIAGSKQGFYAVDYEINAHFADLIQDKHIHFLIVSALGANANSPIFYNKVKGELENYIQSLGIEKLSIFRPSLLIGKRSD
VRFIEDLGQSLFKLIENKWTKPFNINQLQ

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=188, Percent_Identity=30.8510638297872, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI148728168, Length=188, Percent_Identity=30.8510638297872, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI148728164, Length=188, Percent_Identity=30.8510638297872, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI148728166, Length=183, Percent_Identity=31.6939890710383, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI87082218, Length=179, Percent_Identity=36.8715083798883, Blast_Score=108, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71983631, Length=164, Percent_Identity=38.4146341463415, Blast_Score=99, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6320840, Length=159, Percent_Identity=28.9308176100629, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 21225; Mature: 21094

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISTKKAIVVGATGLVGLALVEQLEQTPEFEAITVVVRTESQLLNTYKKVTQLVIDDFL
CCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH
LLNDEDVNGHTHAFSCLGTTLKIAGSKQGFYAVDYEINAHFADLIQDKHIHFLIVSALGA
EECCCCCCCCHHHHHHHCCEEEEECCCCCEEEEEEEECCHHHHHHCCCCEEEEEEEECCC
NANSPIFYNKVKGELENYIQSLGIEKLSIFRPSLLIGKRSDVRFIEDLGQSLFKLIENKW
CCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHCC
TKPFNINQLQ
CCCCCCCCCC
>Mature Secondary Structure 
TISTKKAIVVGATGLVGLALVEQLEQTPEFEAITVVVRTESQLLNTYKKVTQLVIDDFL
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHH
LLNDEDVNGHTHAFSCLGTTLKIAGSKQGFYAVDYEINAHFADLIQDKHIHFLIVSALGA
EECCCCCCCCHHHHHHHCCEEEEECCCCCEEEEEEEECCHHHHHHCCCCEEEEEEEECCC
NANSPIFYNKVKGELENYIQSLGIEKLSIFRPSLLIGKRSDVRFIEDLGQSLFKLIENKW
CCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHCC
TKPFNINQLQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]