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The map label for this gene is ycaC [H]

Identifier: 213157004

GI number: 213157004

Start: 1770752

End: 1771438

Strand: Direct

Name: ycaC [H]

Synonym: AB57_1682

Alternate gene names: 213157004

Gene position: 1770752-1771438 (Clockwise)

Preceding gene: 213157002

Following gene: 213157005

Centisome position: 43.72

GC content: 39.74

Gene sequence:

>687_bases
GTGAATAAATCACTTTTAGAACAACTATCACCAACTAATTGTCAGGTTATTTTTATTGATCATCAGCCGCAAATGGCTTT
TGGGGTACAGTCAATAGATCGCCAAGTATTAAAGAATAATACTGTAGGGTTAGCAAAAGCAGCTAAAACATTCAATATTC
CTGTCACCATTACAACAGTTGAAACTGAAAGCTTTTCTGGTCATACCTATCCAGAACTTTTAGACGTATTTCCGGATGCT
CCATTATTAGAACGTACTTCAATGAATTCATGGGATGATCAAAAAGTACGTGATTCGCTTGCAAAAAATAATCGTAAAAA
AGTGATTGTTTCTGGTTTGTGGACTGAAGTGTGCAACAACACCTTTGCTTTCGGTGCCATGCTTGAAGGCGATTATGAGA
TTTATATGGTCGCAGATGCTTCAGGCGGTACATCGAAAGAAGCACATGATTATGCCATGCAACGTATGATTCAAGCAGGT
GTTGTTCCAGTAACTTGGCAACAAGTATTACTCGAATGGCAACGTGATTGGGCACATCGTGATACGTATGATGCAGTCAT
GGCAATTGTACGTGAGCATTCTGGTGCTTATGGTATGGGTGTTGATTATGCCTATACAATGGTACATAAGGCGCCTGAGC
GTACAACAGCAAAACACGAAGTACTTGCACCAGTTCCTGCAAAATAA

Upstream 100 bases:

>100_bases
CGAGCTGTTTTGCTGTCTATGTTTTTACATTTTTATCTGTTTTGATAATAACCAGTAGGTAATTTTAAAAGCCTTATATA
ATGAATAATGGAGTTTAGAC

Downstream 100 bases:

>100_bases
GAAATAGTTGAATTAAGGGTATTTCGATATTTAAGTTGATTTATTCGATTTTTGACTATATTTGATAAGTGGAAAAGCCA
TCTGCAACTATTCGAGGCAA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNKSLLEQLSPTNCQVIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAAKTFNIPVTITTVETESFSGHTYPELLDVFPDA
PLLERTSMNSWDDQKVRDSLAKNNRKKVIVSGLWTEVCNNTFAFGAMLEGDYEIYMVADASGGTSKEAHDYAMQRMIQAG
VVPVTWQQVLLEWQRDWAHRDTYDAVMAIVREHSGAYGMGVDYAYTMVHKAPERTTAKHEVLAPVPAK

Sequences:

>Translated_228_residues
MNKSLLEQLSPTNCQVIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAAKTFNIPVTITTVETESFSGHTYPELLDVFPDA
PLLERTSMNSWDDQKVRDSLAKNNRKKVIVSGLWTEVCNNTFAFGAMLEGDYEIYMVADASGGTSKEAHDYAMQRMIQAG
VVPVTWQQVLLEWQRDWAHRDTYDAVMAIVREHSGAYGMGVDYAYTMVHKAPERTTAKHEVLAPVPAK
>Mature_228_residues
MNKSLLEQLSPTNCQVIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAAKTFNIPVTITTVETESFSGHTYPELLDVFPDA
PLLERTSMNSWDDQKVRDSLAKNNRKKVIVSGLWTEVCNNTFAFGAMLEGDYEIYMVADASGGTSKEAHDYAMQRMIQAG
VVPVTWQQVLLEWQRDWAHRDTYDAVMAIVREHSGAYGMGVDYAYTMVHKAPERTTAKHEVLAPVPAK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=191, Percent_Identity=31.9371727748691, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25555; Mature: 25555

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLLEQLSPTNCQVIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAAKTFNIPVTITTV
CCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHEECCCEEEEEE
ETESFSGHTYPELLDVFPDAPLLERTSMNSWDDQKVRDSLAKNNRKKVIVSGLWTEVCNN
EECCCCCCCHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHCC
TFAFGAMLEGDYEIYMVADASGGTSKEAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHR
CEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DTYDAVMAIVREHSGAYGMGVDYAYTMVHKAPERTTAKHEVLAPVPAK
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHEECCCCCC
>Mature Secondary Structure
MNKSLLEQLSPTNCQVIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAAKTFNIPVTITTV
CCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHEECCCEEEEEE
ETESFSGHTYPELLDVFPDAPLLERTSMNSWDDQKVRDSLAKNNRKKVIVSGLWTEVCNN
EECCCCCCCHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHCC
TFAFGAMLEGDYEIYMVADASGGTSKEAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHR
CEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
DTYDAVMAIVREHSGAYGMGVDYAYTMVHKAPERTTAKHEVLAPVPAK
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]