Click here to switch to the map view.

The map label for this gene is yceJ [H]

Identifier: 213156879

GI number: 213156879

Start: 1633909

End: 1634481

Strand: Direct

Name: yceJ [H]

Synonym: AB57_1550

Alternate gene names: 213156879

Gene position: 1633909-1634481 (Clockwise)

Preceding gene: 213156878

Following gene: 213156882

Centisome position: 40.34

GC content: 43.46

Gene sequence:

>573_bases
ATGCAAAATAAATCTAACGATACTGCTCCACGTCATTTTAATTTAACTGCGCGAATACTGCATTGGCTTATGGCGGCAGC
AATTCTGGCTATGCTATTTATTGGGGTAGGAATGACCACCTCAATGACTTGGCGTCCGTGGTTAATCGATATTCACCGTC
CTTTAGGAATCGCAATCTTATTATTGGTCATCATAAGATTAATAAATCGACTCTGTTATCCAATTCCACCTTTGCCGCCG
TCTGTACCACGCTGGCAAGCGTTTCTTGCTCATGCATCACATTGGCTACTTTATATTTTGATGTTTAGTTTGCCATTGCT
CGGATGGGCAACGCTCTCGGCAGGTAATTGGCCTGTCACTTTATTTCCGGGTTGGGATCTTCCGCCTATAGCACCAACCA
ACTCTATGCTTTACGCTTGGTTCCGTACTCTACACGGAATTTTGGCTTGGTTATTATTTGCTGTCGTGATTGGTCATCTA
TCTGCTGCGTTATTACATGCGTGGATTTATCGCGATGGCGTATTTTCGAGTATGGCTTTGGGGCCTTCTTCTAAAAAAGA
AGAAGCTGATTAG

Upstream 100 bases:

>100_bases
AGCACGAGCGGCTATCTATTCACAGTCTTACAATGCTCGATTACGTGAAATTGGATTTGGCAAAGCAACGGATGCCGTGG
GCAAATAGGAGAGATGAACA

Downstream 100 bases:

>100_bases
TTTGCTTGAAAGTTTTCGATTGAACGATGAGTTAATGGTGAGGTATAGGGTTTATTTAAAACATATAAATAAGCTCGCTG
ATATAACAACTTAAAATAGA

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MQNKSNDTAPRHFNLTARILHWLMAAAILAMLFIGVGMTTSMTWRPWLIDIHRPLGIAILLLVIIRLINRLCYPIPPLPP
SVPRWQAFLAHASHWLLYILMFSLPLLGWATLSAGNWPVTLFPGWDLPPIAPTNSMLYAWFRTLHGILAWLLFAVVIGHL
SAALLHAWIYRDGVFSSMALGPSSKKEEAD

Sequences:

>Translated_190_residues
MQNKSNDTAPRHFNLTARILHWLMAAAILAMLFIGVGMTTSMTWRPWLIDIHRPLGIAILLLVIIRLINRLCYPIPPLPP
SVPRWQAFLAHASHWLLYILMFSLPLLGWATLSAGNWPVTLFPGWDLPPIAPTNSMLYAWFRTLHGILAWLLFAVVIGHL
SAALLHAWIYRDGVFSSMALGPSSKKEEAD
>Mature_190_residues
MQNKSNDTAPRHFNLTARILHWLMAAAILAMLFIGVGMTTSMTWRPWLIDIHRPLGIAILLLVIIRLINRLCYPIPPLPP
SVPRWQAFLAHASHWLLYILMFSLPLLGWATLSAGNWPVTLFPGWDLPPIAPTNSMLYAWFRTLHGILAWLLFAVVIGHL
SAALLHAWIYRDGVFSSMALGPSSKKEEAD

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=185, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082013, Length=178, Percent_Identity=29.2134831460674, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 21409; Mature: 21409

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKSNDTAPRHFNLTARILHWLMAAAILAMLFIGVGMTTSMTWRPWLIDIHRPLGIAIL
CCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCHHHHHHH
LLVIIRLINRLCYPIPPLPPSVPRWQAFLAHASHWLLYILMFSLPLLGWATLSAGNWPVT
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LFPGWDLPPIAPTNSMLYAWFRTLHGILAWLLFAVVIGHLSAALLHAWIYRDGVFSSMAL
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GPSSKKEEAD
CCCCCCCCCC
>Mature Secondary Structure
MQNKSNDTAPRHFNLTARILHWLMAAAILAMLFIGVGMTTSMTWRPWLIDIHRPLGIAIL
CCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCHHHHHHH
LLVIIRLINRLCYPIPPLPPSVPRWQAFLAHASHWLLYILMFSLPLLGWATLSAGNWPVT
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
LFPGWDLPPIAPTNSMLYAWFRTLHGILAWLLFAVVIGHLSAALLHAWIYRDGVFSSMAL
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GPSSKKEEAD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]