Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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The map label for this gene is vmrA

Identifier: 212637587

GI number:

Start: 5127879

End: 5129321

Strand: Direct

Name: vmrA

Synonym: swp_4905

Alternate gene names: NA

Gene position: NA

Preceding gene: 212637583

Following gene: 212637592

Centisome position: NA

GC content: NA

Gene sequence:

>1443_bases
TTGTCCAATCTCAATAACAGAGTAACCTGCCCACATTCCTACTTCAACACTGTAAAAGTAATGTCAGTATTTACACCAAC
ATCTGAGCAAGACCAATCCATTAAGAAAACATTCTGGCGTTATACTTTGCCCGCCATTGCAGCAATGTTGGTCAATGGCT
TATATCAAATTGTTGACGGAATTTTTATTGGCCATTACATAGGTTTTGAAGGCCTAGCAGCTATTAATATGGCTTGGCCT
GTTATCTATTTTATGGTCGGTTTTGGCATTATGGTCGGCATGGGCAGCGGTAGTTTGTTGTCGATTCAGCGCGGAAAAGG
TGATTTGAGCACAGCGCCTACCATACTTACCAGCAGTATGATTGTCATGCTGCTATTGTCAGCCGCTTCCACCATCATCA
TCTTGCTGACCAGCACCTACTTACTGCAAGCTCAAGGCGGCGTAGGTACGACACTGCAGATGGGACAAGATTATATTGAG
GTGTTTACTTGGGGCACCATTGCTACAGTGCTAGCTGCTGCATTGCCATTTCTAATTCGCAATGACGAAAACCCCAATTT
GGCAACCATATTGATGGCCTTAGGTGCCGTACTTAATATCGTATTAGACTACCTTTTCATTGGTATTTTGGATATGGGAT
TAACTGGCGCTGCGATTGCAACCATAACAGCTCAAATCACTATTTGTTTAATCGGTTTAGGTTACTTTTTGTCTAACTAT
AGCAATATAAAGTGGCCTGTAAAATTCACTCTATTCAATTTAAGTTTTAGTAGGCAAATACTATTACTTGGCTCATCCAG
CCTATTTATGTATCTATACACCAGCTTTGTATTTGCGCTACATAATCGCCTATTTATGGACTACGGCTCGTCTATCACTG
TCGGCGCTTTTGCTATTGTAGGTTATTTGATGGTGCTGTATTACTTTGTCGCCGAAGGGGTTGCAGAGGGTCTGCAGCCT
CCAGTGAGTTACTATTACGGGGCAGAGCAGCATGAGAATATCTGCAAAATGCTCAAGCTATCAGTTAAAGTGACTTTTAT
TGCTGGTATTAGCTGGACTTTGCTACTGAACCTTTTTCCAGAGTTAATGGTTGGCCTATTTAACAGTGAAGATCCTCTGT
TAATATCGACTGCAATAGATGGGATCCGCATGCACCTATTTGCCATGCCACTAGATGGCTTTATTGCGTTAGCTTCAGTG
TATTTCATGGCGACAAACCAAGGTAAGAAAGCGTTGATAGTGGCCTGTAGTAATATGTTAATTCAGCTGCCATTTTTGTT
TATATTGCCGAGGTTTATTGGAGTAGATGGAGTATGGTTAGCCATGCCGCTATCGAATATAACTCTGTGCTTGGTCGTTA
TGCCTTTGGTTTACTTTGACATGAAACAGCGCCAAATTAAGGGCAACCCAACGATAACTATCCAGCAAGCCGCTACAGCA
TAA

Upstream 100 bases:

>100_bases
TGAAAAAGAGCCTAATTTAACCGAGTACACAAATGCGTTAAGTTCATCCAATGTCCAATTCACCACACACTCCTATATCA
AAAACAGATAGAAACTAACT

Downstream 100 bases:

>100_bases
TACCCATCAGAACTTGGAAGGACTTTCTAGGTTTTGCGGTAGCGCTGCAGCAAAATATTAACCCGTTCGACATAAGCCTT
AGTTTCAGCAAAGGGTGGCA

Product: multidrug efflux pump VmrA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>480_residues
MSNLNNRVTCPHSYFNTVKVMSVFTPTSEQDQSIKKTFWRYTLPAIAAMLVNGLYQIVDGIFIGHYIGFEGLAAINMAWP
VIYFMVGFGIMVGMGSGSLLSIQRGKGDLSTAPTILTSSMIVMLLLSAASTIIILLTSTYLLQAQGGVGTTLQMGQDYIE
VFTWGTIATVLAAALPFLIRNDENPNLATILMALGAVLNIVLDYLFIGILDMGLTGAAIATITAQITICLIGLGYFLSNY
SNIKWPVKFTLFNLSFSRQILLLGSSSLFMYLYTSFVFALHNRLFMDYGSSITVGAFAIVGYLMVLYYFVAEGVAEGLQP
PVSYYYGAEQHENICKMLKLSVKVTFIAGISWTLLLNLFPELMVGLFNSEDPLLISTAIDGIRMHLFAMPLDGFIALASV
YFMATNQGKKALIVACSNMLIQLPFLFILPRFIGVDGVWLAMPLSNITLCLVVMPLVYFDMKQRQIKGNPTITIQQAATA

Sequences:
NA

Specific function: NA

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA