Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212637440

GI number:

Start: 4972926

End: 4977419

Strand: Reverse

Name: Not Available

Synonym: swp_4747

Alternate gene names: NA

Gene position: NA

Preceding gene: 212637441

Following gene: 212637439

Centisome position: NA

GC content: NA

Gene sequence:

>4494_bases
ATGAGAGTTATAATTATAAAAAAGTGGTTTAGTTTTATCATTTTGTTGCTTATCTGTTCGACACCGGTCTTTGCCAGTGG
CGTGGTTCAACGCATTTTTACTGCCAGTGACGGACTGATAAATGGCACCGTATGGGATATCAGTTTTGATGAGCATGGTT
TTACTTGGCTAGCGACTGAGGAAGGTTTGTATCGCGTCGGCAGTAGCAAAATTAGAAGACTGGATCAGGTCGGTTTAGAT
TCTAAACTCAGTGATAACCATATCAAAATGGTCTCTCCTCTTAGTAAGCGTCACCTGTTGGTGAGTAGCTTCTATGAAAT
CTACCTTTATGACATCTATAGCAATACTTTTACCGCCTTTGGCAGCCCTGCACTTTTTCCAGAGTTTACGGGAGTGGGGA
TCACCTCACAAATTGAAGATGATCAGGGCAACCGGATCATACTCACTGGTGAGGGAGAGCTGCTACGTTTTAATTACAGC
AAAATGTCCTTAGAGCGGATAAATTTCTTAAGCAGTAATCAAGACTATCCTTGGCGAGCGATGTCCACTCTATCTGATAA
TCGAATTGTGGTGGCGACAGAAGGTAGGATTGAAATCCGCGATGAGGTTGGAGAAAGAGTCGCTGTACTTCCTTGGCATG
AAGCATATGGCCGTATTGAACAAATACTTCGGGATTCCAGTAGTCGAACTTGGATCAGCTCTAGCAAAGGATTTTTTGAG
CTAGTCGAACAAGATTTATCTTTCAGACAGATCGAACAATTACCTTATTATATTACCCATATTGCAGAAGATGATAACGG
CTTTCTATGGTTAGCTAGCCGAACAGGTTTGCTTAAGTGGCAACCCGATGCAGAGCTAGTAGAAAAGTACGGTAATGAAA
TAAAACAGAATTCCAACATCGACTATATACACGATATCGCTGTTGATAATACGGGGCTTGTCTGGATTGGTGGCTCGGGT
GATGGTGTTGCTGTATTGGCTGACACACCGGATTTTTTACTTGAACAGTACAGTAAGTCAGTACCTTACAACATGCCTGA
TGAAGTCATTTGGTCTATCTATTCTGATAATGAAGATTTATGGCTTGGCACTGACGCTGGGCTCTTGCTTATCGATAGAC
AAACCAAACATTCTTATTTCATCACACCGCAGAATATTGATCTCAATGACAGTATTTATCATATTGATGCCCTTGATGAG
CAAAATATTTTACTTTCGAGCACCAGCGGTCTTTCTGTGGTTAATACAAAAACCTTCCATACGCAGACATTTGCGGACTG
GAACGGCGGAGTAGGCAGCTTAGAGAACAAAACCATCTATAGCACCTATTTCGACACGTTGATTCCCGGACGGATTTGGT
TTGCTACTAACCGAGGATTGTTCTTTTGGGAACCAGGTTTAGCTAAACCTCAATATGTAAGCTTGAGTGCTGATAAGAGC
ATTGTTACGTTACAGAAGATTAAACAGGTTAGGCGAGATAGTACTCAGCGTCTTTGGATCGGCGGCGACCGTTTATTCGG
TTATTTTGATAAACAACAGAGCTTTCATGAAATTACAGCCCCCATTGTTAATGGGCAGGCTACGGCATCGGTCACGGTTA
TCAAAGAGGTTGAGCCTGACCTTTGGTGGATTGGGCTGAAGAACCGAGGGGCGGTTGAATACGATCATAAAACAGCTACA
ACTCGCTCTTTAACAGAGGACTGGAAGGTTGACTGCAACAGTGTTTATTTTATTGAAGAGATCGGCCGCTATCGTTTAAT
TGGTTGTCCGCGCTCCATTATACGTTTTGATACGTTAACCGAGGATGTTGTGGTCATCGCACCTGAAGATGGTTTTGTCA
GTGATGAGCTCAATGAGGGAGCTGTGCACATCTCTTCTGAGGGGCTTTATGTTGGAACCCCTGATGGCGCCATGCTATTG
GATGTAGACAAATTGACGAATCGAACGGGAAAAGACACTGTTCTACTTGAGTCGATGGAAGTTTACTTTGAATCTCGAAC
CGAAATTAGTTTAGTCCCGCAAGAAGGGCATCGTATATTGCCAGGGGCGCAATTGGTGAGTTTCCAATTAGCACGGACAA
ATTACCTTAATGAAAAGCCATTGCAACTGCAGTACCGCTTGCGCCGACCTGAAGATAAAACTGGTGGTAGTTTTATCTAC
CTAAATGGTCAATCTCAACTCAATATTTCGGGGTTAGGTGCGGGGACTCATATACTTGAAATTATCAGTTTGGAGAATGA
AGTTTGGTCATCTATTCCCTTTTCATTTTCTTTTGAAGTAGAGGTGTACTGGTGGCAAACGAGTTGGTTTAAAGGCCTAA
TGTTAATAGGGGTCTTGCTAATTGGCTTAGCTGTTATCTTAATCCGGCAGCGGCAAGTGATGGCATTTAGGGCAATAAAT
TCGGCGCTCTCGGACAGTGAAAATCGACTCAAACAAGCATTAAAAGGCAGCGATTCTGAATTGTGGGAATGGCTCCTTGA
GACAGATGTCTTTAGGCTCGAAAATGTTGGTGGTTTATTGAGTGCCAAAGATAGTCAGGTCTATCTTAAAATAGGTGAAA
TCCCTATTCATAATGAAGATAAAAGTAATGTCCTTATAGCATGGAAAGACATGCTTGAAGAGCGAGTCGATCGCTTCGAG
GTCGAATACCGCTATTTGCGCAGTGATAACTCTTGGGGCTGGATCCGAGTGTTGGGACGACCTGTAGAGCGTAATCGGAT
TAATGGAGAGATAGAGAGAGTAGCGGGAATTTACACCGATATTACTGAGCAACGTCAGCTTAAAGATGATGTTTACTTGC
TGGCTCAAGCATTTGAAAATACCACTGAAGCAGTACTTATCTATGACCGAGATGAGCTCATTCAGGTTACCAATAAGGCC
GCTCAAGATATTTTAGGCTATAAATCTAGCACGCTAATCGGACAGTCTTTTTCGGAGGTATTACTCGGTAAAGAGTCTGG
AACTCATATTGCCGACCTGTTGCAGCATGGCTTGAGCTGGACTGGAGAGTGTACGGTTGCGTGTGCTAACGATAAGCAGT
GCGTGGTTTGGTTAAATGTATCTTCGATTTTGAACACTAATGGCGAGGCAACGCATTACGTCGTAGTTTTCTCTGATATC
ACCGACCGCAAACGTACTGAGGCAGATCTACGCCGACTGGCTAATTATGACGTATTGACGGGGCTGCCTAACCGCTCTTT
GTTTTCAAGCAAGCTGTCGCAATCCATTTATCAAGCGGAAAAAGAGGGGGGTAAGCTTGCTTTACTGTTCTTAGATTTAG
ATCGCTTTAAGCATGTGAATGACTCATATGGTCATAGTATGGGTGATGCTTTATTGGTTGAAGCTTCAAATAGGTTACAA
ACATTCATTTCTCAAGAAAATGTACTATGCCGTTTTGGCGGTGATGAGTTTGTAATATTGCTGCGTGATGATATTTATAT
CGATAGTATCAACCGGCTTTGTGAGCAACTGTTGGCGAGTATTCAGCAACCATTTGACCTTTACGGACGTGAATTTTATA
TCTCTACGAGTATTGGTGTGAGTCTATGGCCTGAAGATGCTAAACAGCCAGAGACCTTGATTAAAAATGCCGATTTGGCA
ATGTATCACGCTAAAGATGAAGGTAAAGGTAACTTTAAATACTATTCTCAAGATCGTAACGCGGAAGCGCTTTACCATTT
AAGGCTTGAAGCTGATCTGCGAAAAGCGATTGAAAGAGATGAGTTTGAACTTCATTTTCAGCCGCAAATAGATATTTTAC
AGAACGATAAGCTTGTTGGAGTAGAAGCATTACTGCGCTGGAACCATCCACAAGATGGTTATGTGCGTACCGATATATTT
ATCAAGGTTGCTGAAGCTTGTGGGTTGATTGTGGAGATTGACCGTTGGGTGATGCGTGAAGCTTGTCGTCACGGCGCCCG
CTGGGCGCAAACATTGACTGAACCACTTGAGGTATCGGTCAACATATCAGCACTGCATTTCCGTCAGCATGACTTTATTC
AAGGTGTTGAAAAGTGTTTAGCTGAAACTGGCATGCCGAATCACGCTTTATCGCTTGAGATCACCGAAGGCGTGTTGATG
AAAGAGCTTAAAGTGGCTAAACAACACCTAAAAGAGCTCAAAGCACTGGGAGTTGATGTTGCAATTGATGATTTTGGAAC
CGGTTATTCATCGTTAGCTTATTTACGTCATTTTGAGGTGAACACTTTGAAAATCGATCGTTCGTTCCTAATTGATATCG
CTACTAATAAGGCCGATCAAGCGATTGCCAGTAGTATCATTGAGCTGGCCAGAAACTTAAAGCTAGATGTCGTGGCTGAA
GGTGTTGAAACCCATGAGCAGTTAGAGCAAGTCTTTAGTCGTGGCTGTTATGTTATACAGGGATACTACTTTGCCAAGCC
TATGTCATCGGCTGATTTAGAAGTTTACATGGCAACCCGAGCTGATTTGAGTTTACCGCCCGAAGCAAAGCAACTGCTGG
CACCCAGTCTCTAA

Upstream 100 bases:

>100_bases
TGCCTACAGCGTTTTGAATTCCCGCTGAATGGTCAAACTTTTAATGCAATTGGTATTAAAGCTAAAAACCTCTATACCTA
AAGCTAAATGGGTATATCAA

Downstream 100 bases:

>100_bases
AGCTTGCACAAACTAGTTAAATACCCTAGGTTAAAATATCATTAGAAGAGTCGAATAAGTCATTATGATACATAGAATTA
TTATTCTTTGTTTGCTTGTG

Product: sensory box protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1497_residues
MRVIIIKKWFSFIILLLICSTPVFASGVVQRIFTASDGLINGTVWDISFDEHGFTWLATEEGLYRVGSSKIRRLDQVGLD
SKLSDNHIKMVSPLSKRHLLVSSFYEIYLYDIYSNTFTAFGSPALFPEFTGVGITSQIEDDQGNRIILTGEGELLRFNYS
KMSLERINFLSSNQDYPWRAMSTLSDNRIVVATEGRIEIRDEVGERVAVLPWHEAYGRIEQILRDSSSRTWISSSKGFFE
LVEQDLSFRQIEQLPYYITHIAEDDNGFLWLASRTGLLKWQPDAELVEKYGNEIKQNSNIDYIHDIAVDNTGLVWIGGSG
DGVAVLADTPDFLLEQYSKSVPYNMPDEVIWSIYSDNEDLWLGTDAGLLLIDRQTKHSYFITPQNIDLNDSIYHIDALDE
QNILLSSTSGLSVVNTKTFHTQTFADWNGGVGSLENKTIYSTYFDTLIPGRIWFATNRGLFFWEPGLAKPQYVSLSADKS
IVTLQKIKQVRRDSTQRLWIGGDRLFGYFDKQQSFHEITAPIVNGQATASVTVIKEVEPDLWWIGLKNRGAVEYDHKTAT
TRSLTEDWKVDCNSVYFIEEIGRYRLIGCPRSIIRFDTLTEDVVVIAPEDGFVSDELNEGAVHISSEGLYVGTPDGAMLL
DVDKLTNRTGKDTVLLESMEVYFESRTEISLVPQEGHRILPGAQLVSFQLARTNYLNEKPLQLQYRLRRPEDKTGGSFIY
LNGQSQLNISGLGAGTHILEIISLENEVWSSIPFSFSFEVEVYWWQTSWFKGLMLIGVLLIGLAVILIRQRQVMAFRAIN
SALSDSENRLKQALKGSDSELWEWLLETDVFRLENVGGLLSAKDSQVYLKIGEIPIHNEDKSNVLIAWKDMLEERVDRFE
VEYRYLRSDNSWGWIRVLGRPVERNRINGEIERVAGIYTDITEQRQLKDDVYLLAQAFENTTEAVLIYDRDELIQVTNKA
AQDILGYKSSTLIGQSFSEVLLGKESGTHIADLLQHGLSWTGECTVACANDKQCVVWLNVSSILNTNGEATHYVVVFSDI
TDRKRTEADLRRLANYDVLTGLPNRSLFSSKLSQSIYQAEKEGGKLALLFLDLDRFKHVNDSYGHSMGDALLVEASNRLQ
TFISQENVLCRFGGDEFVILLRDDIYIDSINRLCEQLLASIQQPFDLYGREFYISTSIGVSLWPEDAKQPETLIKNADLA
MYHAKDEGKGNFKYYSQDRNAEALYHLRLEADLRKAIERDEFELHFQPQIDILQNDKLVGVEALLRWNHPQDGYVRTDIF
IKVAEACGLIVEIDRWVMREACRHGARWAQTLTEPLEVSVNISALHFRQHDFIQGVEKCLAETGMPNHALSLEITEGVLM
KELKVAKQHLKELKALGVDVAIDDFGTGYSSLAYLRHFEVNTLKIDRSFLIDIATNKADQAIASSIIELARNLKLDVVAE
GVETHEQLEQVFSRGCYVIQGYYFAKPMSSADLEVYMATRADLSLPPEAKQLLAPSL

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA