| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212637312
GI number:
Start: 4849772
End: 4853020
Strand: Reverse
Name: Not Available
Synonym: swp_4610
Alternate gene names: NA
Gene position: NA
Preceding gene: 212637313
Following gene: 212637310
Centisome position: NA
GC content: NA
Gene sequence:
>3249_bases ATGTTACAGAAATTAATAGACGCTGCGATCCGCAATCGTCTGATGGTGGTGCTCGCGCTTTTAGCTGCGGTGATTGCCAG TGCAGCTATGCTGCCAAAACTTAATCTAGATGCTTTCCCTGATGTAACTAACGTTCAGGTGACAGTGAATACGGCAGCGG AAGGGCTTGCGGCTGAAGAAGTCGAAAAGCTAATTAGTTATCCTGTTGAGTCGGCCATGTACGCGCTGCCTTCAGTAACA GAAGTTCGCTCACTGTCGCGCACGGGCTTGTCAATTGTCACGGTGGTATTTGCTGAGGGAACTGATATCTATTTTGCTCG CCAGCAAGTATTTGAGCAATTGCAGGCAGCGAGAGAGATGATCCCTGATGGGGTTGGGGTGCCTGAAATTGGCCCAAATA CCTCTGGCTTAGGACAGATCTACCAGTACATTCTACGGGCTGAGCCAGGTTCAGGCGTTGATGCGTCAGAGCTACGAAGC CTGAATGACTACCTCGTTAAGCTTATTATGATGCCAGTAGGTGGCGTGACTGAGGTGCTGTCGTTTGGTGGTGAGGTGCG TCAATATCAAGTGCAGATCGACCCGAATAAAATGCGCAGCTATGGCCTGTCCATGGAGCAAGTGACGAGTGCATTAGAGA GCAACAACCGCAACGCGGGTGGTTGGTTTATGGACCAAGGTCAAGAGCAGCTCGTTGTGCGTGGTTATGGTTTGTTGCCA GCGGGTGATGCTGGTTTAAAAGCGATTACCCAGATCCCTGTTGCTGAAGTGGCAGGTACACCGGTACGCGTGAGCGATAT TGCTAATGTTGAATACGGCAGTGAGATCCGCGTTGGTGCTGTCACCATGACGCGCCGTGATGAGGCTGGTAATCAACAGG CACTCGGTGAGGTTGTTGCTGGCGTAGTACTTAAGCGTATGGGCGCAAATACTAAAGCAACCATTGATGATATCAGTGAG CGTACCGCTTTAATCGAACAGGCCCTGCCTGAAGGTGTGTCGTTCGAAGTTTTTTATGATCAAGCAGACTTAGTCGATAA AGCGGTGGAGACAGTGCGTGACGCATTGCTAATGGCATTTGTGTTTATCGTGGTGATCTTGGCGCTGTTTTTAGTCAACA TTCGCGCCACTATGTTGGTGCTGCTGTCGATCCCAGTATCGATTGGTTTGGCGCTGATGGTGATGTCTTACTTTGGTATG TCTGCGAACTTGATGTCGCTTGGAGGCTTGGCGGTAGCGATTGGTATGTTGGTAGATGGTTCGGTGGTGATGGTTGAAAA CATCTTCAAACACCTAACACAGCCAGATAGACGTCATTTATCCGAGGCGCAAGCACGTGCTTCAGGTGAAGTTGACCCAC ATCATGCAGATGAAGATGGTATTGATGCGGGTGAGCGTAGCGGTATTGCGATGCGTGTGATGCTGGCTGCAAAAGAGGTG TGTAGCCCAATCTTTTTTGCGACAGCTATTATCATCGTAGTCTTTGCCCCACTATTCGCTTTAGAAGGTGTTGAAGGCAA GCTGTTCCAACCCATGGCCATTAGTATCATTTTGGCGATGATCTCTGCGTTGTTAGTGGCACTTATTGCTGTACCAGCGT TAGCCGTTTATCTGTTTAAACGTGGTGTTACGCTAAAAGAAAGTGCAGTGCTTAAGCCAATTGAAGCGGGGTACCGTAAG TTATTGAGCGCTACAATGGCGAAACCGAAAGTAGTGGTGATTACTGCCGTTGTGATGTTTGCTATGAGCATGATGTTGCT ACCAAGACTGGGTACAGAGTTTGTCCCAGAACTAGAGGAGGGGACGATTAACCTGCGGGTGACATTAGCACCGACTGCGA GCTTAGGCACCTCTTTAGAAGTTGCTCCTAAACTTGAAGCTATGTTGCTTGAGTTTCCTGAAGTTGACTATGCGCTGAGC CGTATCGGTGCCCCTGAACTGGGCGGCGATCCAGAGCCTGTGAGTAACATTGAAATCTATATTGGACTCAAGCCGATTGA ACAATGGGAACATGCAGAAACACGTCTAGAGTTGCAGCGTAAGATGGAGGAGAGACTCAGTATCTACCCTGGTCTGTTAT TTACCTTCTCACAACCTATTGCGACTCGTGTTGATGAATTGCTGTCAGGGGTAAAAGCTCAGCTAGCGATTAAGATCTTT GGTCCCGACTTAGATGTGTTGTCTGAGCGCGGTCAGGTGTTAACCGATTTGGTGGCTAATATTCCTGGTGCAGTGGATGT GTCCTTGGAGCAGGTGAGTGGTGAAGCACAACTGGTGGTACGTCCAAAGCGTGATCTGTTAGCGCGTTACGGGATCAGCG TTGATACCGTAATGGGCTTAGTGAGTCAGGGGATCGGCGGTGTGAGCGCGGGGCAGGTGATTGATGGTAACGCTCGCTAC GATATTAATGTGCGATTGGCTGAAGAGTACCGTAGTGCACCTGACGCATTGCGTGACTTACTATTAAGCGGCGCTAATGG TGCCACGGTACGTTTAGGTGAAGTGGCCGATGTTGTTATCGAGATGGCACCTCCCAATATTCGCCGTGATGATGTACAGC GTCGTGTGGTCGTGCAAGCAAACGTAGCAGGCCGTGATATGGGCTCGGTGGTAAACGACATTTATGCCGTGGTACCACAA GCTGAATTGCCACCAGGTTACACTGTTGTGGTTGGCGGCCAATATGAAAACCAACAACGTGCTCAGCAGAAGCTAATGTT AGTGGTGCCTATCTCTATAGCATTGATTGCACTGCTATTGTATTTCTCGTTTGGCTCAATTAAGCAGGTCGGGCTAATTA TGGCTAATGTACCATTAGCATTGATTGGCGGCGTAGTGGCTTTGTATGTCAGTGGCACTTATCTTTCTGTGCCAAGTTCG ATTGGCTTTATCACCCTATTTGGTGTGGCCGTCCTTAACGGTGTGGTACTGGTGGATTCGATAAATCAGCGTCGAGCGAG CGTCAAGTCAGAGTCGAATGAGTCTCTTTTTGAAGCGGTTTATGAAGGCACTGTTGGTCGCTTGCGTCCAGTTCTGATGA CAGCACTGACCTCTGCACTGGGCTTGATCCCTATCTTAATTTCATCCGGGGTCGGTAGCGAAATTCAGCAGCCGCTAGCA ATTGTGATTATTGGTGGTCTGTTCAGCTCGACAGCGTTGACATTATTAGTGCTGCCAACATTGTATCGCTGGTTGTACCA AGATCGCGCTAACAAAGGTCTGAGCAAGGATTTTGAAGCTCTGGATTAA
Upstream 100 bases:
>100_bases AGCATCAGGTTCTAACGTTGTTGTTTCAGGTGCATTTTTCTTGTCTTCAGAGCAAGCGAAGTCTGGCTTCGATATTCACA ACCACTAAGAGGCGCTCACT
Downstream 100 bases:
>100_bases TGGGGTTAGTGTAAGCGCCCGACATCAACTGTGGTAAGGGCGCTGAAGGTTTTCTTTGGCAGGGCCGCTAAAGGGGGTTG AAGTCGGTGTTCAGCATTAG
Product: heavy metal efflux pump CzcA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1082_residues MLQKLIDAAIRNRLMVVLALLAAVIASAAMLPKLNLDAFPDVTNVQVTVNTAAEGLAAEEVEKLISYPVESAMYALPSVT EVRSLSRTGLSIVTVVFAEGTDIYFARQQVFEQLQAAREMIPDGVGVPEIGPNTSGLGQIYQYILRAEPGSGVDASELRS LNDYLVKLIMMPVGGVTEVLSFGGEVRQYQVQIDPNKMRSYGLSMEQVTSALESNNRNAGGWFMDQGQEQLVVRGYGLLP AGDAGLKAITQIPVAEVAGTPVRVSDIANVEYGSEIRVGAVTMTRRDEAGNQQALGEVVAGVVLKRMGANTKATIDDISE RTALIEQALPEGVSFEVFYDQADLVDKAVETVRDALLMAFVFIVVILALFLVNIRATMLVLLSIPVSIGLALMVMSYFGM SANLMSLGGLAVAIGMLVDGSVVMVENIFKHLTQPDRRHLSEAQARASGEVDPHHADEDGIDAGERSGIAMRVMLAAKEV CSPIFFATAIIIVVFAPLFALEGVEGKLFQPMAISIILAMISALLVALIAVPALAVYLFKRGVTLKESAVLKPIEAGYRK LLSATMAKPKVVVITAVVMFAMSMMLLPRLGTEFVPELEEGTINLRVTLAPTASLGTSLEVAPKLEAMLLEFPEVDYALS RIGAPELGGDPEPVSNIEIYIGLKPIEQWEHAETRLELQRKMEERLSIYPGLLFTFSQPIATRVDELLSGVKAQLAIKIF GPDLDVLSERGQVLTDLVANIPGAVDVSLEQVSGEAQLVVRPKRDLLARYGISVDTVMGLVSQGIGGVSAGQVIDGNARY DINVRLAEEYRSAPDALRDLLLSGANGATVRLGEVADVVIEMAPPNIRRDDVQRRVVVQANVAGRDMGSVVNDIYAVVPQ AELPPGYTVVVGGQYENQQRAQQKLMLVVPISIALIALLLYFSFGSIKQVGLIMANVPLALIGGVVALYVSGTYLSVPSS IGFITLFGVAVLNGVVLVDSINQRRASVKSESNESLFEAVYEGTVGRLRPVLMTALTSALGLIPILISSGVGSEIQQPLA IVIIGGLFSSTALTLLVLPTLYRWLYQDRANKGLSKDFEALD
Sequences:
NA
Specific function: NA
COG id: COG3696
COG function: function code P; Putative silver efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA