Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212636269

GI number:

Start: 3716091

End: 3718574

Strand: Reverse

Name: Not Available

Synonym: swp_3513

Alternate gene names: NA

Gene position: NA

Preceding gene: 212636270

Following gene: 212636268

Centisome position: NA

GC content: NA

Gene sequence:

>2484_bases
ATGAGATTGAATAAAATTTTTGCCTCGATGTTATTAGTCGGAGCGTCTTTTTCAGGGAACGGTTGGGCTGATACTTTTCA
ACCTTTTGAAGTAGCTGATATCCAAGTTGAAGGATTACAGCGAGTTGCACTCGGTGCCGCTCTACTAAACCTACCAGTGA
AGGTAGGTGATACTGTTGATCAATTAAAATTGCAGCAAGCAATTAAGAGCTTATATGCGTCAACTAACTTCGAAAAGATT
GAAGTGTTGCGTGACGGCAATGTTTTGGTGGTTAAAGTCACCGAAAGGCCGACAATTAGCTCTGTTACCTTTGAGGGTAA
CAAAGACATTAAAGATGAACAGCTGCAAGAAAGTCTTGATGGTTCAGGCGTTAAAATTGGTGAGTCACTTGACCGTACCA
TGCTGTCTGGCATCGAAAAAGGCCTTCAAGATTTCTACTATGGCGTTGGTAAGTATGGCGCCAAGGTAAAAGCTGAGATC
GTCAATTTGCCGCGTAATCGTGTCGAGCTTAAATTCTCCTTTACCGAAGGCTTAGCTGCTGAAATTCGTCAAATCAACGT
TGTTGGTAACAGTGAATTTAGTGACGAAGAGCTCATTGGTATGCTTGAGCTTAAAGATTATGTTGCTTGGTGGGATCTAT
TTGGTGAACGTCGTTACCAAAAGCAAAAGCTTCAAGCCGATTTAGAAACGATTAAAACCTATTATCAGAATCGCGGTTAT
ATTCGCTTTGATGTGACTTCAACTCAAGTCGCTATGACTCCTGACCGCAAAGGTCTCTACATTACGATTAATGTAGATGA
AGGTGAGCAGTATAAGGTTAAAGACGTTAACTTAACGGGTGATTTGATGGGGCGTGAAGAGTTGCTACAAGCAATCTTGC
CTATCAAAGAAGGCGATATGTATAACGGCGGCGATGTTACATTTACCGAAGAGATGTATGGTAAGTATCTAGGTCGTTAC
GGCTATGCCTACCCTGAAGTGAAGACTTACCCTGAAATTGATGACGAAACTAAAGAAGTGACGTTAAATATCAATGTTAA
ACCAGGTAAGCGTGTCTACGTGCGTAATATCAATTTCGCTGGTAATACAGTGACGAAAGATGAAGTTATGCGTCGTCAAT
TGCGTCAAATGGAAGGGGCATGGTTAAACTCTGCTCAAGTTGAACTGTCAAAGTCTAACTTAAACCGCTTAGGTTATTTC
GAGACTGTTGATACTGAAACGGTTCAAGTTCCTGGCACTGATGATTTAGTTGATGTTGCTTTTAATGTGAAAGAACAGCC
ATCTGGTTCATTTAACGCTGGTGTGGGTTACGGTACTGAATCTGGGCTTAGCCTGCAGTTCGGTGTACAGCAAAGCAACT
TCCTTGGTACTGGTAACCAAGCTGGCGTCAACTTGAATACCAATAAATATTCTAAAAACGTTAACCTATCGTTTACTGAC
CCTTACTTCACTAAAGATGGTGTAAGTTTAGGTGGCAGTATCTATTGGAGCGAATTTGATGCTGATGAAGCAAACCTAGA
GGCCTATAAAAATAGCTCCTATGGAATTGCAATCAATTCGGGCTTCCCAATTAATGAATACAACCGTATAAACGGTGGTA
TAGGTTATCGCCATAACGAAATTTCAGAGATTTCGGCTTATGAACAAGCGGTTAGGTTCTACGACATCTACCGAGATTCG
GATGATCCTAATGCTGGCTTGAGCTTTGATAACTTTGAGTTAAGTCTCGGTTGGTCAAGAAGTAACTTGAACCGCGGTAC
CTTCCCATCAGACGGCTCGTCACAGCGTTTGAACGGTAAGATGACGGTTCCTGGGTCAGACTTACAATATTTTAAAGCAG
ACTTTGATACCAACTTTTATTTCCCTATTAACCGTAGTCACAGCTTTGTTATGCTAGCGCGTGGCCGTTTAGGTTATGGT
AATGGTTACGGTCAGTTTAATGATAATGACCAAATTCTACCGTTCTGGGAAAACTATTACTCAGGTGGTAGTAGTTCATT
ACGTGGCTTTAAGTCTAACTCGGTTGGTCCACGTTCATTCTACTTATATCGTGGCAGCGAGCCTTGTTCACCAGATCCTT
CTGGAACGGGTTGTACGCTACCTGGGGATCCGAACCAAATTCAAGTTAGTTCAGGTCGCTCAATTGGTGGTAACGCTATT
GCAACAGCGAGTTTAGAGTTAATTGTACCTACGCCGTTCTTAGATGAAGCCTATACCAACTCTGTTCGTACAAGCTTCTT
TGTGGATGCGGGTAACGTATGGGATACTGAGTTTGACTATGAGTCGTATCGTTATCTTCCAATAGAAGAGTTTAATAAAC
TTGAAGATTATAGCGATCCGAGTCGTATTCGTGCCTCTTGGGGTATGAGCGTGCAGTGGTTATCGCCGATGGGACCTATG
GTGTTTAGTCTTGCATGGCCAATCAAGGAATACGAGGATGATGAAACTGAGATCTTCTCGTTTAATATTGGTAAAACTTT
CTAA

Upstream 100 bases:

>100_bases
AGATTTGGGGCAGCATTGCTGCTAATGTTGATGAGTGTTGCGCTCTTCAATGATTTTTCCCGACTCTGATCAGGGACAGA
CAAATAATTAGAAGTGCTCT

Downstream 100 bases:

>100_bases
AAATAATTTAAATGTAATCGGCAAGTTTTGCTGAGATAAAGGAGTTTGTTTTGAATAAGATGTTAAATCGCGCAATGATG
GTTTTAGTTCTTTTAGGTGC

Product: surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>827_residues
MRLNKIFASMLLVGASFSGNGWADTFQPFEVADIQVEGLQRVALGAALLNLPVKVGDTVDQLKLQQAIKSLYASTNFEKI
EVLRDGNVLVVKVTERPTISSVTFEGNKDIKDEQLQESLDGSGVKIGESLDRTMLSGIEKGLQDFYYGVGKYGAKVKAEI
VNLPRNRVELKFSFTEGLAAEIRQINVVGNSEFSDEELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYQNRGY
IRFDVTSTQVAMTPDRKGLYITINVDEGEQYKVKDVNLTGDLMGREELLQAILPIKEGDMYNGGDVTFTEEMYGKYLGRY
GYAYPEVKTYPEIDDETKEVTLNINVKPGKRVYVRNINFAGNTVTKDEVMRRQLRQMEGAWLNSAQVELSKSNLNRLGYF
ETVDTETVQVPGTDDLVDVAFNVKEQPSGSFNAGVGYGTESGLSLQFGVQQSNFLGTGNQAGVNLNTNKYSKNVNLSFTD
PYFTKDGVSLGGSIYWSEFDADEANLEAYKNSSYGIAINSGFPINEYNRINGGIGYRHNEISEISAYEQAVRFYDIYRDS
DDPNAGLSFDNFELSLGWSRSNLNRGTFPSDGSSQRLNGKMTVPGSDLQYFKADFDTNFYFPINRSHSFVMLARGRLGYG
NGYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYLYRGSEPCSPDPSGTGCTLPGDPNQIQVSSGRSIGGNAI
ATASLELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYESYRYLPIEEFNKLEDYSDPSRIRASWGMSVQWLSPMGPM
VFSLAWPIKEYEDDETEIFSFNIGKTF

Sequences:
NA

Specific function: NA

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA