Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212636212

GI number:

Start: 3643679

End: 3646750

Strand: Direct

Name: Not Available

Synonym: swp_3451

Alternate gene names: NA

Gene position: NA

Preceding gene: 212636211

Following gene: 212636215

Centisome position: NA

GC content: NA

Gene sequence:

>3072_bases
ATGTTCAAACTATTTATTGAAAGGCCGAAACTCGCGATTATCATCTCGCTGTTTATCACTCTTATCGGGGTGATTGCAGC
GCTGCAATCTCCTATTGGACGGTACCCAGATGTCGCGCCAGTGACCATAGAGGTCAGCACTTTTATGGACGGCGCTTCGG
CTGAAGTGATCACCAAATCCGTTGCGCCTGAAATTGAAAAGCAGGTTAATGGCGTCTCTGGCATGGATTACATGCAAAGC
ACATCAGGTGCCGATGGAACCTATACGCTAACCATCACTTTCGCTAATGGCACCGATCCCGACACCGCAAACAACTTGGT
ACAGAACAGGGTTAATCTGGCATTGCCGGAGCTACCTGCTGATGCCTCTAAAAACGGTGTCAAGGTTGAAAAAGTCTCTA
ATGGTTTACTCATAGGTTTGGCAATCAATGATCCTTCTGGCAAGGCTACAGATACTGAAATCAGTGGTTTTTCTGGCGGC
ATATTAAAAGAGTCGCTGCAGCGTGTTAATGGTGTATCTAAAGTCGATGTTTTAGGGGAGAAAAAGTACTCCATGCGAGT
TTGGTTAAACCCCAATGCTATGAGCCACCTGTTTGTGAACGTCGGTGACATACAAGCCGCCATTAACGCTCAAAATAAGA
TTTCATCGGCGGGTTCTGTAGTAAGCAATACTCTTGAGTACTCAGTTAGCGTTGACGGTGGCCTTTCTTCAGCTGAAGAG
TTCGGCAACATAGTGGTTCGCGGCGAACATTTCAAGAAACCAGTATTACTAAAAGATGTTGCCACAATAGAGCTCGGAGC
CGAAGTTTACACAGCCAACGCATACGCAGGCATCAGTGCGGGTTCTGTTCTTTTCATCTATAAAGACCCTAGCGCCAATG
CTATTGAGGTCGGCAAAGCGGTTCAAGCAATTACTACATCTTTAGAAACTGACTACCAAATACAGACTGTTTATGATGCA
ACGGCATTTGTCATTGGCGCCATTGATAACGTGCTAGAAACTCTTGTCCTTGCCATTATCATCGTTGCACTTATTACCTT
GGTATTCATGCAATCCTTTAGATTAACTCTCATCACTTGTGCCGCAATTCCAGTGTCACTAGTGGGGACATTTGCCGCCA
TGGCCGCGCTAGGCATTGATATCAATATCATCTCAATGCTTGGACTGGTGATGGCTATCGGTATTGTGGTTGATGCAGCC
ATTATTGTTATTGAAGCCGCAGAACACGAGCTACAGGAACAACCACAATTGACGCCAAAGCAAGCGGTATCTGCCAGTCT
AGGTAAAGTCGTCAGCCCAATTATTGCATCAGCACTGGTGTTGCTTGCAGTCTTTGCTCCCACCATATTTATGAGTGGCA
TGACAGGGATCATCTATAGCGAATTTGGCATTGTACTTAGTGTTGCGGTATTAGTTTCAACCCTAGTGGCTTTGACTTTA
ACTCCGGCGCTTTGTGCACTGTTTATGAAGCCCCCAAAAAAAGGATTTATCGCGCGCTCACTCGAAAAACTTATCGGCGT
AAAGATCACCGTCTTCAAGTTTGTAACCCATTTTTTTGTTAAGGTGCCGCTATTATCTGTCATCTTGCTTGCCGGAGCAC
TTTACCTAACAATAGAGGATGCTAAAGAGCTAGCAACAGGTATGCTGCCAGATGAAGATGCAAGCGCAGTATTTGTTGTA
GGCTCATTTCCCGCAGGTACCGCGCTCCCAGTCACTGATGCGTATACGTTAGAGTTAGTTGAAAAACTACAGGATATAGA
GGGAGTATCGAATTCAATCTCAGCCTCGGGTTTTAACTTAATTACCAGCACCGCCGATATGGGCAGCTTTCTTTTACTGC
TAAACCTAAAGCCGATGGATAGCCGTGAGCTAAGCGATAACCAAGTGATAGAGGCGGCAAATGCAGTCATTGCCGAAACT
GGCGTAGAAGCATTTGCTTTTAAACCGCCAGTCATCCCAGAACTGGGCTTAGTTGATGGCGTCAGCTTTGTTATTAAGGA
TGCAAAAGGCTATAGCCCTGGTGAAATGTTTGAAATTTCAAACTCTATCATCGCACAGCTCAGTAGCTTTGAAGATGATG
TGGCGCTGGCTATGACCCAGTACGCCGTAGATAAACCGTCGATAAAGCTAGAGATAAAACGACAAGAGCTCAATAAATAT
GGGATCTCATTTGCTGATACCGTCACAGGTATGCAGGCTCATTTTGGTGGCAGTTACATCAACACCTTCAATATGAATGG
CCGCAATTACAAAGTTATGGTGCAAAACTCACCTGAATACCGCACCTCAGCCGAATCCCTCAAAGCGATTAAACTAAGCC
AAGCCAACGGAACCCATATTAGTGCAGACAAAATTTTTGATATTAGTGAAGAGCTAGCACCTAACTTTATCAACCGCTTC
AATGCGCAGCAATCAGTTGCTTTTGATGTCATTCCAGTCAGTGCCACTGGCGACGTCATCAATCTAATCAACGAGCTTGA
GTTACCGACAGGGATCTCAGTTGAATTTACAGGCGCCTCAGCCGAGGAGGTAAAAGCGGGGAATCAGGCTATTATCGTGC
TGGCACTGGCACTACTCGTCACCTACATGGTGCTGGTCGCTCAGTATGAGAGCTGGTTAATACCTGCAGCTATCATGTTA
GTCGTTCCCACCGCTGTTATCGGCATTGTGTATGGCGTTATATACCTGCAAGGCGACATTAATATTCTCACTCAACTTGC
CGCTGTATTATTGGTTGGGATGAGCGTACGTAATGCTATTCTGATTATAGAATATGCCAAAGATTTGCGAGAAAAAGGCA
TGGCGATTAAGACTGCAGCAGTCGAGGCTATGCGACTTAGAGCACGCGCCGTATTCATGACAGCATTCAGTTTTGGTGTC
GGACTTGTGCCGCTGATGATGGCTGATGCGATAGGCAATGGCGCGCAACAAGCCCTAGGTTATGCAAGCTTTGGCGGTAT
CGTTTCAGCTACCTTTATTGGTTGCATCTTTGCTTGTGTATTCTTTGTTATCTTGCAAAACACCCGAGAATGGTTCAAGC
CACAGGCCAGTTGCCTATTAGCCAGCAGCTAA

Upstream 100 bases:

>100_bases
AGAACCCAGCACTAAGTATTACAAGCTTAACTAAGTCATTTCGAGGTATGTATTAATTCGATACCAACCAAGAGATGATG
AAAAAATAAAGGTGATGGGT

Downstream 100 bases:

>100_bases
TCATCCAAGCTTTTGCACTATCAATAACTAAAGCACCACAGCCACTGTGGTGCTTTATGACTTTAAGTCGTTAGCGGCTA
AACCGTTAGCTACTTCGCCA

Product: hydrophobe/amphiphile efflux-1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1023_residues
MFKLFIERPKLAIIISLFITLIGVIAALQSPIGRYPDVAPVTIEVSTFMDGASAEVITKSVAPEIEKQVNGVSGMDYMQS
TSGADGTYTLTITFANGTDPDTANNLVQNRVNLALPELPADASKNGVKVEKVSNGLLIGLAINDPSGKATDTEISGFSGG
ILKESLQRVNGVSKVDVLGEKKYSMRVWLNPNAMSHLFVNVGDIQAAINAQNKISSAGSVVSNTLEYSVSVDGGLSSAEE
FGNIVVRGEHFKKPVLLKDVATIELGAEVYTANAYAGISAGSVLFIYKDPSANAIEVGKAVQAITTSLETDYQIQTVYDA
TAFVIGAIDNVLETLVLAIIIVALITLVFMQSFRLTLITCAAIPVSLVGTFAAMAALGIDINIISMLGLVMAIGIVVDAA
IIVIEAAEHELQEQPQLTPKQAVSASLGKVVSPIIASALVLLAVFAPTIFMSGMTGIIYSEFGIVLSVAVLVSTLVALTL
TPALCALFMKPPKKGFIARSLEKLIGVKITVFKFVTHFFVKVPLLSVILLAGALYLTIEDAKELATGMLPDEDASAVFVV
GSFPAGTALPVTDAYTLELVEKLQDIEGVSNSISASGFNLITSTADMGSFLLLLNLKPMDSRELSDNQVIEAANAVIAET
GVEAFAFKPPVIPELGLVDGVSFVIKDAKGYSPGEMFEISNSIIAQLSSFEDDVALAMTQYAVDKPSIKLEIKRQELNKY
GISFADTVTGMQAHFGGSYINTFNMNGRNYKVMVQNSPEYRTSAESLKAIKLSQANGTHISADKIFDISEELAPNFINRF
NAQQSVAFDVIPVSATGDVINLINELELPTGISVEFTGASAEEVKAGNQAIIVLALALLVTYMVLVAQYESWLIPAAIML
VVPTAVIGIVYGVIYLQGDINILTQLAAVLLVGMSVRNAILIIEYAKDLREKGMAIKTAAVEAMRLRARAVFMTAFSFGV
GLVPLMMADAIGNGAQQALGYASFGGIVSATFIGCIFACVFFVILQNTREWFKPQASCLLASS

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA