Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212635907

GI number:

Start: 3285954

End: 3290309

Strand: Direct

Name: Not Available

Synonym: swp_3135

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635906

Following gene: 212635908

Centisome position: NA

GC content: NA

Gene sequence:

>4356_bases
ATGACTTCACTTTCTGAAAAAGTGAGTATTATCCCCTGTTGCCTTATGACATTGACTAAAAATAAAATTAAAAATATGCC
TAAGACATTACTAAAAATTGTACTTTTTCTACTCGTTTCTTTTGTTCCAATACAGTCCTCTTTAGCATTTACGCTAAATG
CTGTTTCGTTAGGGGTGCCTGAAGGGCTCTCCCAGAGCAACTTAACTTCAATCGTTGAAGACGATGATGGCTACGTTTGG
ATTGGTACTCTAAATGGCCTAAATCGATATGACGGTAAACACTTTCGGCACTACTTTCCTTCAGCAAGAAACGAATTAGC
AAGTGCATTTATCCGCAGCTTGTATATCAGTCAATCAGGCTCTATGTATGTTGGCACAGATAAAGGTTTGTCAATATATG
ATTCGTCTCTAGACAAACTAGTTTCGTCAAAAAATCTGGGCTTTGAGATAAATGACGCTATATGGACGATCAACGAATAT
AACAATAATATATTTATTGGTACTGAAAATGCTATATATATTTTGAGTGAATTAAATAACAAAAAGCTATCACTAAAGAA
CAAATACTCTGGTGACTTTGGCACTGTAAAAAACATAATAATGTTTGAAAACACAATGTTTATTCGAAACTACTCTGGTT
TCATATATTCCATTTCGGATCGAGTTGACTTAGTTACAAATAACGCCAACGCTATAAAGGTTATTAATGGCAAGCTAATT
ATATTTAAGAATAATGGCGCATTTGAGTATTCCAATGGAAACCTGGTTAATTATTCAGCCATTGAGCTTATTAGTGTTAC
AGAGCAGTCTGATTTCAATTTGGGTTTAGATAAAAACTCAGTATTTATGATAGACAATGTTAAACAACCAGTTTTCATTG
GAAAATTAAATGTATCAGAAAAATCATTAGAACACCCTCAAATCATCAGAGGGCGTACAAAAACATTTATTCTAAACCAA
AATGATGGTTTTTTCATAATTGATGACGATAGTAACCTAATAAAAACAAAAATAGTAAGCGGTGGTAATGTTTGGTCCAT
TTCTCCAAATAGTAAAAATAATTTAGTTGTTGCTTCTGATGACCAATTTATTCGGCTATATGATAAAGACCTTAATATTA
TTGAGCTGTATGATTCTAAAGTTAAAGGTCCTAAATCTGCGGTTAAGATTGGAAATCTGATTTATGTCGCGAGTTCAAAA
GGTTTCTTCTCAATAAATGTAGACAATGGCATTATAAATGACATCCTTGAAGGCACATTTTTTATCGCTAAATCTAAAAA
AGACGGTGGTAGTATTTTTATTGGTTCAACCTCTGGAACTATCTTACAATATTATGTTACCACAGGGTTTACACAGGAGT
ACATAATCGACAAAGGTAACCCGGTCTTCGACATAAAAGAAAATAACAACTCTTTATTCGTAGCAACACAAGGTGGTTTG
TTTGAGCTTGCAAATGACTTAGTTACTCCTGTTTATACAAAGCAGATGGTGCTTAGTATTGATATTTACAATGAGGAAAT
ATTATTCGGCACCAGTTCAGGGTTGGAATCACTATCCACAAAAAGTGGAGGTCCCGAATTAATATATAGTAAAAACAACC
CTATATTTTCAATAACACAAAACAACAACTTTATTCTAGCCTCTTCTGTTAACGAAGTTATCTTAAAGGACAAGAAAGAT
GATAAGTTATATAATCTAACAAAAGAGTTGGGTGTTCAGGAAGAGTATAACACTCATGCAATATTAAAAGGAAATGAAGA
AATATACATAGGCGGAATATCTGGAGTTAGCTTTGTATCAATAAATAGGATGATGGAATACTTATCCTCAAGAGAAACAC
TCGATGTAACACTTGATGAGTTATTAATATTCAACATACCTGAAACACCTAATGGTGGAGTGTTGAATAACAAGCTAAGT
AAAACAGAAAAACTTAAATTAAAGTATTCAGACTATCCATTCACAATATCTTTTCATAGCCCTAGAAGTCCACTTAAAGA
TATTAATTATATTTATCAGATGCGTGGTCTATCAGAGTCTCTAATTAATTCAGAAGGAATAAACTCTGCGACTTACACAA
ACTTGTCTCCTGGAGATTATGAGTTTGCTGTTTATGCTATTGATCCCGTTTCGGGTAAACATGGTTCCGAAAAAACCTTA
AGCATCGAGATAACCCCACCATGGTGGTTATCAACTCCAGCTAAAGCTCTATATTTCTTAGTAGTACTTTTAATATCTAT
TGCGACAATAAAAATTGCGATGAGAAGAAGAGTGGTTCAGAGACAGATCGCAAAAAGTGAAGAGCGGCTGAAACTGTCAC
TGTGGGGTAGCGGTGATGAGATGTGGGATTGGGACATTGAGACAGGACAAATTTATCGCTCAAATATTTGGGGGTCACTA
GAATTCCCAAGAGATGGGCAACGCTCTGGTCAAGAAGGCGAAGAGAGTAATATCCACCCTATGGACCAAATTCGAGTGCG
CGATGCCTTAAACAAACATTTCTACGGTGAGACCGATCATTTTGAAGCCGCATACAGGGTTAAAGGAAAGTCTGACGATT
GGGTGTGGATTTTGGATCGTGCAAAAATTGTAGAGCGCGACGAGAATGACAATGCACTGCGTATGACAGGTACTATCAAA
AACATCAGTAACTTTAAGCAAGCTGAAGAGCAGCTGAGACTTTTTGAGCGGGCGATTCAGAATATTTCTGAAGGCATGTT
CATTTTAGATAACGAGTTCTGTTTTGTAGAGGTGAATGAAGCCTGTTGTGACCTTTCAATGCTAAGTAAAAAGGATTTTA
TTGGCACACTGTTTAATTTTGACCTATATCCCGATAGTTATTCAGAACAGATCCGCTCCATATTAAAACAGCAAGGACGA
TGGAGTAATGAAGTCGAATCAGCAAGAGGCAACGGTACTAGCTTTTTAATGGAATTAACTATCGATGCCATTTACGACGA
ACAGGGTGAATTGTCTCATTATGTTGGTATTTTCTCTGATGTCAGTCGACGTAAGCAGCAGGAAGAGGAGCTAAGAAAGC
TCACCAATAACGACTTGCTAACTAACCTTCCCAACCGCTCTAACCTTATGGTGACGCTCGGTAACTTGGTGAAAAGAGAT
TCTCACCACACCTTAATGGTTTTGGATCTCGATAATTTTAAGAAAATTAACGACTCCTTAGGTCACCAAGTGGGTGACGA
GTTACTGATATTAGTCTCTGAACGAATTCAAGCAGCCGTACCTCATCACACCAGCATTTATCGTTTAGGCGGTGATGAGT
TTGCTATATTAATCGACAAAAATCCTGATATTGGTGTGAGTGCTGTGATTGCAAAAACAGTCATCCACGCTTTTGAAAGT
GCTTTTCAATTGTCTGCAGAAAAAGTCGTGGTTGGGGTAAGTATCGGTATCGTTTTATATCCTGAAGATGACCAAAATGA
ACAAGCCCTGTTGCGCAAAGCAGATATTGCGATGTACCACGCTAAATCGGCTGGCGGTAATCGCTACCAATTCTATTCAG
AATCACTTAATAAGAACGCGATTAGACAGCTAGAGGTGGAAAACCTAATCCGTGAAGGCATTAAAGATGATCTGTTTGAA
GTGTACTACCAACCAAAAATAGATTTAAAAACAGGTAATATGGCTGGTATGGAAGCTCTGGTTCGCTTAAACCATCCAGA
GCATGGCTTAATTCCACCTAATAGCTTTATCCCGCTAGCCGAAGAAAACGGACTCATTGTTGAAATCGGCGATATTGTGC
TTAAAAAAGCATGCTTTGCAGCCCAAAAATGGCGCTCGCAAGGTTTGTTTAATGGTCGTGTGGCTGTTAATTTGTCGTCA
AAACAGTTTGCTCTGCCCGATCTTCAACAACGCATCGAATCTGTGTTGCGATTAACTCAGTTGCCAGCTGCAAACTTAGA
ACTTGAAATAACCGAAGGAACAGTAATACGTGAACCGGAAAAAGCGATAAAAGTGATGCAGCAGCTATCAAAAATGGGGG
TAAGTTTAGCCCTCGATGACTTTGGTACAGGCTACTCTTCGTTGTCATATTTAAAGCGTTTTCCAATCCACACTCTTAAG
ATTGATAAAGCATTCGTTGATGATATCGATAAATCCGATCGCGACTTGAAAATGGTCGATTCAATTATCACTATCGCCCA
CAATATGGGGCTTTCAGTGGTTGGTGAAGGCGTAGAAGAAACGTCTCAACTGAGTATTTTACGAGCACTAAAATGTGAAG
AGATCCAAGGCTATATTTATAGCAAGGCTGTAACCGAACATGAGTTCACTAATCTTCTGCACAATGATACGAATGCTAAA
CCATTAAAAGCAATCTCACTAAATAAAGCGCAATAA

Upstream 100 bases:

>100_bases
GGCTCAAAAAGCAATAAAAACAAGCTAAACGGACAGATATCATACTGAAAAGGACACAGATAATGATAATTAGCTACAAA
TTACACGAAGGTTTTTGACA

Downstream 100 bases:

>100_bases
CTTAACCATGTAAACATTGGCACAACATCTGCAATAACCTTTTCAATAGTCAAAAAAATGATACTTTGAGAAGGTTAAGA
TGAAAAAGATAATTAATGGA

Product: PAS:GGDEF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1451_residues
MTSLSEKVSIIPCCLMTLTKNKIKNMPKTLLKIVLFLLVSFVPIQSSLAFTLNAVSLGVPEGLSQSNLTSIVEDDDGYVW
IGTLNGLNRYDGKHFRHYFPSARNELASAFIRSLYISQSGSMYVGTDKGLSIYDSSLDKLVSSKNLGFEINDAIWTINEY
NNNIFIGTENAIYILSELNNKKLSLKNKYSGDFGTVKNIIMFENTMFIRNYSGFIYSISDRVDLVTNNANAIKVINGKLI
IFKNNGAFEYSNGNLVNYSAIELISVTEQSDFNLGLDKNSVFMIDNVKQPVFIGKLNVSEKSLEHPQIIRGRTKTFILNQ
NDGFFIIDDDSNLIKTKIVSGGNVWSISPNSKNNLVVASDDQFIRLYDKDLNIIELYDSKVKGPKSAVKIGNLIYVASSK
GFFSINVDNGIINDILEGTFFIAKSKKDGGSIFIGSTSGTILQYYVTTGFTQEYIIDKGNPVFDIKENNNSLFVATQGGL
FELANDLVTPVYTKQMVLSIDIYNEEILFGTSSGLESLSTKSGGPELIYSKNNPIFSITQNNNFILASSVNEVILKDKKD
DKLYNLTKELGVQEEYNTHAILKGNEEIYIGGISGVSFVSINRMMEYLSSRETLDVTLDELLIFNIPETPNGGVLNNKLS
KTEKLKLKYSDYPFTISFHSPRSPLKDINYIYQMRGLSESLINSEGINSATYTNLSPGDYEFAVYAIDPVSGKHGSEKTL
SIEITPPWWLSTPAKALYFLVVLLISIATIKIAMRRRVVQRQIAKSEERLKLSLWGSGDEMWDWDIETGQIYRSNIWGSL
EFPRDGQRSGQEGEESNIHPMDQIRVRDALNKHFYGETDHFEAAYRVKGKSDDWVWILDRAKIVERDENDNALRMTGTIK
NISNFKQAEEQLRLFERAIQNISEGMFILDNEFCFVEVNEACCDLSMLSKKDFIGTLFNFDLYPDSYSEQIRSILKQQGR
WSNEVESARGNGTSFLMELTIDAIYDEQGELSHYVGIFSDVSRRKQQEEELRKLTNNDLLTNLPNRSNLMVTLGNLVKRD
SHHTLMVLDLDNFKKINDSLGHQVGDELLILVSERIQAAVPHHTSIYRLGGDEFAILIDKNPDIGVSAVIAKTVIHAFES
AFQLSAEKVVVGVSIGIVLYPEDDQNEQALLRKADIAMYHAKSAGGNRYQFYSESLNKNAIRQLEVENLIREGIKDDLFE
VYYQPKIDLKTGNMAGMEALVRLNHPEHGLIPPNSFIPLAEENGLIVEIGDIVLKKACFAAQKWRSQGLFNGRVAVNLSS
KQFALPDLQQRIESVLRLTQLPAANLELEITEGTVIREPEKAIKVMQQLSKMGVSLALDDFGTGYSSLSYLKRFPIHTLK
IDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEETSQLSILRALKCEEIQGYIYSKAVTEHEFTNLLHNDTNAK
PLKAISLNKAQ

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA