Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212635896

GI number:

Start: 3273262

End: 3275124

Strand: Direct

Name: Not Available

Synonym: swp_3122

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635894

Following gene: 212635904

Centisome position: NA

GC content: NA

Gene sequence:

>1863_bases
ATGACAGTCAGTGACAATATTAGGTCTATCTTAGCGACTAACAACAGCGAACATATCTCCATTGCGATGTTTGGATTAGG
CTCTGTAAGCCAGATTTTGGCGCTGAAAAAACTGCATTCAACTAAAAACGGTTCGCTAACATTAAAGATTTTCTGTGCTG
TTGATGATCATATTGAACAGATATTTAAGGTCTTATCACAGACTCGTCCAGAAATTCATCTCGTCTCGATAGAAGGCTGT
CAACGAGTGAAGCTTAACCATGGCCGTTTCATTATTGATTTCCACTTAGGTGATTATGGGCAGCAGTTACGTCAGCTGCC
ACTCTGCAACAGCTTAATATCTCATTGGTTGTGCTCCTCTGAATTTGAAACACAATCGATGTCGCAAGCGTTATTCTGGC
AAATGGCCAAACACAGCCAAGATAATTGTCACTGCCTAATATCTGCTGAGCTACCCATTGAGAGTCAACAAAAGCTGCTA
GCACTATGTGACATGGTTGGATTTACCTCCGAAAATTCAATGGTAAGTTCAGCTCAAATTGATAATGTTCTGTTGATGGA
GCGGCACGCTTTGCGAGCTCAGCAGTCAAGTCAACAAGCTCCCTACCCAATTAAAATAGCGGAAAGTACTACTGAAATAG
CCGTAATAGGTGGTGGAATTGCGACTGCAAGTTTAGTTTTATCGCTGGCAGAACGACAGAAAAAGATCCATGTATTTTGT
GAAGATAGCGAGTTGGCTCAAGCGGCATCAGGTAACAAACAAGGCGCTATCTACCCATTGCTCACACCTGATAATAATAG
CTTAAGTCAGTATTTTCAGCTGGCCTATCTCTTTAGTTTGCATCGCCTAAACGCACTTGCTGCTACCAAGTACCCGATAG
ACTTCGATCTCTGCGGCGTACTGCATACTGGTCATGATGAGCGAAGCCGAAAGCGAGTACAGAAGATAATCAACGGACAT
CCGTGGAACACTGATATCGCCCATGCCGTTAATGAAAAGCAATCAAGCGAAATTGCTGGCTTAGAAATTAATGAAGCTGG
GATTTTTTACCCTTTAGGTGGCTGGGTCGCACCACAAGATCTCACCCAAGCATCATTTGAACGGGCTCAGCAATTATCTG
ATGTTACTGTGCAATTAAACACGCAAATAACGGCACTTGAAAAGTCTGATGCTGGCTGGTTTTTAGTTCATAAACAACAA
CGCCTAGGCCCCTACAAAACGGTAGTAGTTGCCAACGGTAAGTCTCTTACTCGCTTTGAACAGACTAAACATCTACAAGT
CACAGGTTTTAGAGGTCAAGTTAGCCATGCACCAACAAGATCTAAGCTGTCTAAGCTCAGTACGGTATTATGTGCACATG
GTTACATGACCCCAGTGAACAATGCCTTACACTGTTTAGGCGCGAGTTATGTTAAAGATGCCGACAACTTAGCTTATAGC
CCGCAAGAGCAAGTCGATAACCTGCACAAAATACAGCATAGCTATTTGGATAAAGATTGGAACCGCGACATAGATATATC
CAAGCATAGTGCCCGAGTCGGCGTACGCATGGTGACTCGCGACCATGCGCCGATGATGGGACCGGCCCCCGACCAGGATG
CAATTATGGCGCTTTATCACAACCATCAACTCACACCTGCAAGCAGAACGTTTTGGCAAAACACACCAGCGCCAGTTCAC
AAAGGTTTATATATCCTAGGTGGGCTAGGCTCTCGAGGATTAAGCTCTGGCTTGCTCGCTGCGGAGGCATTAGCCGCTCA
GCTCTGTGGTGAAACCATGCCACTCAGCACCGACTTTGTCGCGCTTTTAAATCCGAACAGAATGTGGATGCGAAAGCTGC
TTAAAGGCAAGGCGTTAGAGTAA

Upstream 100 bases:

>100_bases
CCTCACCTAAATTGCAGCATAAAAATGTACAATTTAGCTCAAGTTATAAATATCCTACCCTGTTTTTGTGAGGGTTTAAT
TTAACATTAAAGACGAAACC

Downstream 100 bases:

>100_bases
TATGTAGCCAACTTAGATCAAAAGACACTTAGTAAGCTGTCTTCAGTTTAAACTACTCTGCACCTGCCATCATTAAGGCA
TTCTTAAAGTCATTAACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>620_residues
MTVSDNIRSILATNNSEHISIAMFGLGSVSQILALKKLHSTKNGSLTLKIFCAVDDHIEQIFKVLSQTRPEIHLVSIEGC
QRVKLNHGRFIIDFHLGDYGQQLRQLPLCNSLISHWLCSSEFETQSMSQALFWQMAKHSQDNCHCLISAELPIESQQKLL
ALCDMVGFTSENSMVSSAQIDNVLLMERHALRAQQSSQQAPYPIKIAESTTEIAVIGGGIATASLVLSLAERQKKIHVFC
EDSELAQAASGNKQGAIYPLLTPDNNSLSQYFQLAYLFSLHRLNALAATKYPIDFDLCGVLHTGHDERSRKRVQKIINGH
PWNTDIAHAVNEKQSSEIAGLEINEAGIFYPLGGWVAPQDLTQASFERAQQLSDVTVQLNTQITALEKSDAGWFLVHKQQ
RLGPYKTVVVANGKSLTRFEQTKHLQVTGFRGQVSHAPTRSKLSKLSTVLCAHGYMTPVNNALHCLGASYVKDADNLAYS
PQEQVDNLHKIQHSYLDKDWNRDIDISKHSARVGVRMVTRDHAPMMGPAPDQDAIMALYHNHQLTPASRTFWQNTPAPVH
KGLYILGGLGSRGLSSGLLAAEALAAQLCGETMPLSTDFVALLNPNRMWMRKLLKGKALE

Sequences:
NA

Specific function: NA

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA