Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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The map label for this gene is Not Available

Identifier: 212635835

GI number:

Start: 3204914

End: 3208273

Strand: Direct

Name: Not Available

Synonym: swp_3056

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635832

Following gene: 212635836

Centisome position: NA

GC content: NA

Gene sequence:

>3360_bases
ATGAAACGGATGTTAATCAATGCAACTCAATCTGAAGAGTTGCGCGTAGCCCTTGTTGATGGGCAACAATTATACGATCT
AGATATTGAAAGCCCAGGTCACGAACAAAAGAAAGCAAACATCTATAAAGGAACGATCACTCGTGTTGAGCCGTCTTTAG
AAGCTGCTTTTGTTGACTATGGCGCTGATCGCCATGGCTTCCTACCGCTTAAAGAGATCGCTCGCGAATATTTCCCAAAA
GGTTACTCTTTCCAAGGCCGTCCTAACATTAAGGAAGTGGTTAAAGAAGGCCAAGAAGTCATCATTCAAATTGATAAAGA
AGAGCGTGGCAACAAAGGCGCTGCGCTAACAACCTTTATCAGCCTTGCTGGTTCTTACTTAGTCTTAATGCCAAATAACC
CACGTGCAGGCGGGATTTCTCGTCGTATCGAAGGTGATGAGCGCACAGAGCTAAAAGCTGCACTATCAGAGCTTGATATT
CCACAAGGTATGGGCCTTATTGTTCGTACTGCAGGTGTTGGTAAAGACCCAGCAGAGCTAAAATGGGACTTAAAAGTTCT
ACAACATCACTGGGCTGCAATTAAAGAAGCGGCTGAAAGTGCACCAGCGCCATTCTTAATCCACCAAGAAAGTAACGTGA
TTGTTCGCGCTATTCGCGACTATTTACGTCGTGATGTTGGCGAGATCCTTATTGATCACCCTCGTATATATGAGCAAGCC
AAGGAGCACGTTTCATTAGTACGTCCAGACTTTGTTGAACGTATTAAGCGTTATGATGCTGAAGTTCCACTATTTACCCA
CTTCCAAATTGAAACGCAGATTGAATCAGCATTCCAACGTGAAGTGCGTTTACCTTCTGGCGGTTCAATTGTTATCGACC
CAACAGAAGCGCTAACTTCTATCGATATTAACTCTGCCCGAGCAACTAAAGGTGGAGATATTGAAGAGACGGCACTGAAC
ACTAACTTAGAAGCCGCTGACGAGATTGCACGTCAATTACGTTTGCGTGATCTAGGTGGTTTGGTCGTTATTGATTTCAT
TGACATGACGCCCGTTCGCCATCAACGTGAAGTTGAAAAGCGCATGCAAGATGCCGTGCACCACGACAGAGCTCGTGTTC
AACTAGGCCGTATCTCACGCTTTGGTTTGATGGAGATGTCACGTCAGCGTCTACGCCCTTCTTTAGAAGAGTCTGCCGCT
CACCTTTGTCCTCGCTGTCATGGACAAGGCACTATTCGTGGTACTGAGTCACTTGCACTTTCCATCTTACGCTTGATGGA
AGAGGAAGCAATTAAAGAGAACACATCACAAATTGAAGCGATTGTACCTGTTGATGTTGCAGCCTTCCTACTGAACGAAA
AGCGTAAAGCGATTCGTATCACCGAAGAGCGCCACAATGTTGAAGTGTATGTGATCCCAGATCCAAACATGACAACACCA
GATTATCGAGTTGTTCGTCATCGTAAAGATGATCAGATCAGCGAGTCTAGCTATAAGCTACTTGAGCAAGAAGAGGCTAA
GCTATACGAACCTCGTAAGCTCGAGCGCGCAGCACCACCGCAACCAGCTCTTAAAGGTTTCTCTTCACCTAAGAAAGTCG
CTCCAGTTGAAGTCGAAACAAAACCAGCACCAGCTAAAGCTGCCGAGCCAGGTCTGTTTGCTAAGATAGCTGCTGCAATC
AGTTCGCTATTTGCTAGCAACGAAGAGCCTAAAGTTGAGCCTAAACAGCAAGACAAAGGAAGCCGTAACGGTCAGTCTCG
TAACAATAACCGTCGTAACAATAATCGTCGTAATGACCCTCGTCGCAACCGCAGCGAAGGCCGCAACGAAGGCCGCAACG
AGAATCGTAATGGCAACGAGCAAAATAAAGACAAGCGTAATAAGAGCAATCGTAATGACGCTAATGACAACCGTTCAAAA
GCTCAAGATGATAATAAACGCCCACAACGCAATGAGAAGCCTCGTAAGCAAGCAGAGGCTAACAACGAAAATGCTGAGCC
TAAGCAAGAAGCTGCACGAGAGCGTCGTCAACGTCGCAACATGCGTCGTAAAGTGCGTGTAAGTAATGAGCAAGAAGAAG
TAAAAGAAGTTGTAGCGAATACTGAAGCACCTGTACAAGTGAAAGCTGACGATAAGCCAGCCCGCCCTAAGCGCCAGCCT
CGTAAGCCAAGAGCAAAGGTTGAAGCAGTTGAAAACGCTGAAGTCACTGCAGAGGTTTCAGCTAATGTCGAAACCGTTGC
AAATGATAAAGCAACTAGTACAGAAGCAAGTACAGTAAAACAAGCAGCGCCTAAAGCAGAATCAGTATCGACGCCAGTCG
AAGCAACTGAGTCAGCTGACGCTGAACAAACGCCTGCCGATGATAAGTCTCGTGAGCCTCGTGAAGGTCAACGTAGAAGT
CGTCGTAGTCCTCGTCATCTTCGCGCTGCTGGTCAACGTCGTCGTCGTGATGAAGACACTCAGCAAGGTGATGAAAATGC
CGCAGAAGCTGTATTTACACCAAACGAAGACATTGAATCTATACAAGCGATAGAAACTCATGTTGAAGCGCCGGTAACAC
CAGTCGTTGAAGCTAAAGTTGAAGCAACTGCAACAGCTGAAGTTGTTAAGGCTGATAACGTAGAAGTTGTTGAAGCTAAA
GTAGAAAAACCACAGCCAGCAAAAGCAAGCTCTGTTGCAAGCTCTTCTGCGATGAACACTTCACCAGCTTTTAAGCCAAC
AGTTAACGTTGAGCCTAAGCCAGTAGATGTCCCAGAAGTTAAAGCTGTTGAAGCCGCTGTAGTGTCTGAGCCTGCTGTAG
AAGTTATTGTTGAGACGCCGGCTCCAGTAGCTGCAGCTCCTATTAAAGCTGAAGCTGTGAAGGCTGAGCCAGTAGCAGAA
GCTGAAGCACCAGTTAAAACAGAAGCAGTGAAGACTGAGCCAGCAGAAGCTAAAGCGCCAGTTAAAACAGAAGCTGTGAA
GGCTGAGCCAGTAGAAGCTAAAGCGCCAGTTAAAACAGAAGCTGTGAAGGCTAAGCCAGCAAAAGCTAAAGCGCCAGTTA
AAGCCAAGCCTGTAGAAACAGCGGCCAGCTCAAAGGCGGCATCGGCACCGATGGCAAAACCTGCTGCAATTAAGCCTACC
GAAGCAAAAACTATCGAAAAGGTTGTTGCGGAACCCGCTGCGGAAGCAAAACCAGCCACTAAAGCTAAACCAGCGAGTCG
ATTCGGTTCTATGGTGATGTCAGAAATGACTAAACCTGTTGTTGAAGTCAGAGAAAATATTGAAACACCTACAGGTCGTC
AATATGAAGCATCTGAAAAAAATAACGACGTGAAACCACGTGTTGCAAATAGCGCTAACTCAGATATGTCTCGTACCTAA

Upstream 100 bases:

>100_bases
CCTAGAGACTGACCGTGAGGTCCTGTTTTTTAATCCTAGGCCCGTAATGCAGTGAAAGAAGTATCGTTTGATGACCTTTA
TAAAGAAGAATTAAGTCATC

Downstream 100 bases:

>100_bases
TCTAGAGTAAAGCAGTATCGAAAAAGCCATGCTGAAGAGCATGGCTTTTTTTATGTTAAAATTAGCTTAATTTTGGTAGT
ATGCGCGCCCAGACATATAT

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1119_residues
MKRMLINATQSEELRVALVDGQQLYDLDIESPGHEQKKANIYKGTITRVEPSLEAAFVDYGADRHGFLPLKEIAREYFPK
GYSFQGRPNIKEVVKEGQEVIIQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTELKAALSELDI
PQGMGLIVRTAGVGKDPAELKWDLKVLQHHWAAIKEAAESAPAPFLIHQESNVIVRAIRDYLRRDVGEILIDHPRIYEQA
KEHVSLVRPDFVERIKRYDAEVPLFTHFQIETQIESAFQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETALN
TNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVEKRMQDAVHHDRARVQLGRISRFGLMEMSRQRLRPSLEESAA
HLCPRCHGQGTIRGTESLALSILRLMEEEAIKENTSQIEAIVPVDVAAFLLNEKRKAIRITEERHNVEVYVIPDPNMTTP
DYRVVRHRKDDQISESSYKLLEQEEAKLYEPRKLERAAPPQPALKGFSSPKKVAPVEVETKPAPAKAAEPGLFAKIAAAI
SSLFASNEEPKVEPKQQDKGSRNGQSRNNNRRNNNRRNDPRRNRSEGRNEGRNENRNGNEQNKDKRNKSNRNDANDNRSK
AQDDNKRPQRNEKPRKQAEANNENAEPKQEAARERRQRRNMRRKVRVSNEQEEVKEVVANTEAPVQVKADDKPARPKRQP
RKPRAKVEAVENAEVTAEVSANVETVANDKATSTEASTVKQAAPKAESVSTPVEATESADAEQTPADDKSREPREGQRRS
RRSPRHLRAAGQRRRRDEDTQQGDENAAEAVFTPNEDIESIQAIETHVEAPVTPVVEAKVEATATAEVVKADNVEVVEAK
VEKPQPAKASSVASSSAMNTSPAFKPTVNVEPKPVDVPEVKAVEAAVVSEPAVEVIVETPAPVAAAPIKAEAVKAEPVAE
AEAPVKTEAVKTEPAEAKAPVKTEAVKAEPVEAKAPVKTEAVKAKPAKAKAPVKAKPVETAASSKAASAPMAKPAAIKPT
EAKTIEKVVAEPAAEAKPATKAKPASRFGSMVMSEMTKPVVEVRENIETPTGRQYEASEKNNDVKPRVANSANSDMSRT

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA