| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 212635476
GI number:
Start: 2817326
End: 2819851
Strand: Direct
Name: Not Available
Synonym: swp_2682
Alternate gene names: NA
Gene position: NA
Preceding gene: 212635475
Following gene: 212635480
Centisome position: NA
GC content: NA
Gene sequence:
>2526_bases ATGGTAGGTCCAAACGCATTTAAACAAACAGTACTTACTGCAGCCGTGAGTATGGCATTGTTAATTACTGGTTGTAATAA TCAACATACAGTAAAAAGTACGACTAAAAGTGATACAACACCACTGAGTAGTGATAAGCAGCAAAACACTATCGCTCCCG GAATACCAGGCAACTCTCCAACTTGGGCTTTTGCAGGAAAAACCGGCATAGGTACCTCTTATGAGCCCTATATAGATGGC AGTTATCAGGATAGCGCTAAAAATCCTATCAGCCGAGTTTGGTTCTCGCTTGCCCAAGGTATTGTGACTGAAACCATGTT TGGTCTTATCCACAACGCGCAATTAAAAGAGATGCAATTTGTAATCAGCGGTAAAGATTTTGTGGATACAGAAAAAGACG ATACTGAACACTCTGTCGAATATTTACACACTGATGAGGATGGTAAGCCACTATCACTCGCCTATAAGCTTATTAATAAA GATAGAGACGGCAAATACCAAATAGAAAAGCACATTTTTACTGATCCTGATCGCGATTCACTAATGATGAAGGTGGTCTT TACTGCATTTGAATCAGGGATCACCCCTTACCTAGTCGTTAACCCGCATATAGACAATAGCGGGGCAAATGATATTGCTC AGTATGACGATGCTAATAAAGTATTTACCGTTAATACTACCGATAAAAACAGCAGTGTCATGAGTGTAAAATCGAGTGTT GACTTTAGCCAAGCAAGCGTTGGCTTTGTCGGCATCTCAGATGGATTAACCGATCTAAATAATAACGGTGATATGAACTG GCAGTACAGCGCAACCTCTGATGAAAACCAAGGAGGGAATGTCGCACTCACAGCCCAGTACCCGAGCCCAATAATAGCTG CAGGCGCGCAGCAAGCTAAGATCAGTTTTGATCTCGTCATCGGTTTTGGCAACAACAAGCAAACCAGTTTAGCGAATACA GACGCGACTCTCGCTGCTGGTAGTGACCAAGTACTTGCCGACTTTAATGGTGAAGGCGACGCCTTAGGGTGGGAAGATTA TCTAAGCTCACTCCAAGCTTTAAACAACATGGTTAATACCACCACAGACAATGGCAAGTTGTTATACGCCAGTGCATTAG TGTTAAAGGCACAAGAAGATAAAACCCATGCAGGTGCCTTAATCGCTTCACTTTCTAACCCATGGGGCGATACGGTTTCT GCAAAAGTTGGCAGCACGGGCTACAAGGCTGTATGGCCACGCGACTTTTATCAGTGCGCGATGGCATTTCTAGCAATGGG CGACAGCCAAACGCCAAAAACAGCCTTTGAATATTTGGAAAAAGTTCAGGTGAATGAAAATACTCCGGGTTATAGCGGCA CTCCGGGATGGTTTTTACAAAAAACCCATGTAGATGGACAGATTGAATGGGTCGGCGTGCAGTTAGATCAAACAGCGATG CCCATCATGCTCGGCTGGAAGTTATGGCAAGCAGGTGTATTAAGCGATACAGAAATAAACCATTGGTACAAAAAGATGCT CAAACCTGCCGCAGAGTTTCTTGTTAACGGCGGCGAAGTTAATCTAGATTGGAACCATACCAATATTACGCCACTAAAAA CTCAACAAGAGCGCTGGGAAGAACAACAAGGCTACTCGCCCTCCACAACAGCTGCAGTTATTTCAGGGCTGATAAGCGCC AGCGATATTGCCACTCATGCTGGCGATAAAGAAGCGGCTAAGCGCTACTTAGCAACAGCTAAAAATATGCAAGGTAAAAT CAATGGTCTGATGGTTACAACCGCAGGTCTATTGTCAGCTCCCAGCGGCGTAGAACGTGACAATACACAAACACAAGCTA GTCTGCCCTACTTTGTGCGCTTAGCACCAAATGGAGAGCCAAATAAAGATAACAAGCTTGGCGATAACAATGGTAGAGCA GGTTTAGATCAACGTTTGATTCTGGATGGTGGCTTCTTAGAGTTAGTGCGTTATGGCGTCACTTCAGCAAATGATAAGAC CATCAACAATACGGTTAGCCTTATTGACAATCAGCAGCTAGAGGATAACTTAAGAGTCAAATACCAGTTCAATGCTAAAG ATGGCTCAGCCATTCCAGGGTTTAGACGCTATGGTAATGACGGTTACGGTGAAGATGAAGTCAACGGTAATAGCTACGCC GAGAGGGGCGTCAACACAGCTGGGCAACGCGGCCGTGTTTGGCCATTCTTTACTGGAGAGCGCGGGCACTTCGAACTCGC TAAGTTAATCCAAAACAACAGTTTAAGTAATAAGGAACACCAAGCACTCATTAACACCTATGTGCAAGGAATGGAAACTT TTGCTAATGAAGGGTTAATGCTACCGGAGCAAGTATGGGATGGAGTTGGTAACCCTACACGTTACAACTATAAGCTAGGC CAAGGCACTAACTCTGCAACCCCGCTTGCATGGACTCACGCAGAGTACATTAAGCTGGTGCGCTCTATGTCCGATAAAAA AGTATGGGATAATTATTCAATCGTGAGCGACAAACTCAAGCATTAG
Upstream 100 bases:
>100_bases AGTAGTTCAAGCTCAATATCAGACAAAGCAACAAACGTTAACAATAAGCTTTATATATTACATAAAGTAAATTAAAAAGA GCATCATTTTGGGGAAGCAA
Downstream 100 bases:
>100_bases GTGTACTGATTTAGCAACTTTAGTTCAATACATTAAGCCCGTTAGCAACAAGCTAGCGGGCTTTAAAATCGGTGTATTAA TGGGCCGATCGCATTTTTTA
Product: glucan 1,4-alpha-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>841_residues MVGPNAFKQTVLTAAVSMALLITGCNNQHTVKSTTKSDTTPLSSDKQQNTIAPGIPGNSPTWAFAGKTGIGTSYEPYIDG SYQDSAKNPISRVWFSLAQGIVTETMFGLIHNAQLKEMQFVISGKDFVDTEKDDTEHSVEYLHTDEDGKPLSLAYKLINK DRDGKYQIEKHIFTDPDRDSLMMKVVFTAFESGITPYLVVNPHIDNSGANDIAQYDDANKVFTVNTTDKNSSVMSVKSSV DFSQASVGFVGISDGLTDLNNNGDMNWQYSATSDENQGGNVALTAQYPSPIIAAGAQQAKISFDLVIGFGNNKQTSLANT DATLAAGSDQVLADFNGEGDALGWEDYLSSLQALNNMVNTTTDNGKLLYASALVLKAQEDKTHAGALIASLSNPWGDTVS AKVGSTGYKAVWPRDFYQCAMAFLAMGDSQTPKTAFEYLEKVQVNENTPGYSGTPGWFLQKTHVDGQIEWVGVQLDQTAM PIMLGWKLWQAGVLSDTEINHWYKKMLKPAAEFLVNGGEVNLDWNHTNITPLKTQQERWEEQQGYSPSTTAAVISGLISA SDIATHAGDKEAAKRYLATAKNMQGKINGLMVTTAGLLSAPSGVERDNTQTQASLPYFVRLAPNGEPNKDNKLGDNNGRA GLDQRLILDGGFLELVRYGVTSANDKTINNTVSLIDNQQLEDNLRVKYQFNAKDGSAIPGFRRYGNDGYGEDEVNGNSYA ERGVNTAGQRGRVWPFFTGERGHFELAKLIQNNSLSNKEHQALINTYVQGMETFANEGLMLPEQVWDGVGNPTRYNYKLG QGTNSATPLAWTHAEYIKLVRSMSDKKVWDNYSIVSDKLKH
Sequences:
NA
Specific function: NA
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA