Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 212635476

GI number:

Start: 2817326

End: 2819851

Strand: Direct

Name: Not Available

Synonym: swp_2682

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635475

Following gene: 212635480

Centisome position: NA

GC content: NA

Gene sequence:

>2526_bases
ATGGTAGGTCCAAACGCATTTAAACAAACAGTACTTACTGCAGCCGTGAGTATGGCATTGTTAATTACTGGTTGTAATAA
TCAACATACAGTAAAAAGTACGACTAAAAGTGATACAACACCACTGAGTAGTGATAAGCAGCAAAACACTATCGCTCCCG
GAATACCAGGCAACTCTCCAACTTGGGCTTTTGCAGGAAAAACCGGCATAGGTACCTCTTATGAGCCCTATATAGATGGC
AGTTATCAGGATAGCGCTAAAAATCCTATCAGCCGAGTTTGGTTCTCGCTTGCCCAAGGTATTGTGACTGAAACCATGTT
TGGTCTTATCCACAACGCGCAATTAAAAGAGATGCAATTTGTAATCAGCGGTAAAGATTTTGTGGATACAGAAAAAGACG
ATACTGAACACTCTGTCGAATATTTACACACTGATGAGGATGGTAAGCCACTATCACTCGCCTATAAGCTTATTAATAAA
GATAGAGACGGCAAATACCAAATAGAAAAGCACATTTTTACTGATCCTGATCGCGATTCACTAATGATGAAGGTGGTCTT
TACTGCATTTGAATCAGGGATCACCCCTTACCTAGTCGTTAACCCGCATATAGACAATAGCGGGGCAAATGATATTGCTC
AGTATGACGATGCTAATAAAGTATTTACCGTTAATACTACCGATAAAAACAGCAGTGTCATGAGTGTAAAATCGAGTGTT
GACTTTAGCCAAGCAAGCGTTGGCTTTGTCGGCATCTCAGATGGATTAACCGATCTAAATAATAACGGTGATATGAACTG
GCAGTACAGCGCAACCTCTGATGAAAACCAAGGAGGGAATGTCGCACTCACAGCCCAGTACCCGAGCCCAATAATAGCTG
CAGGCGCGCAGCAAGCTAAGATCAGTTTTGATCTCGTCATCGGTTTTGGCAACAACAAGCAAACCAGTTTAGCGAATACA
GACGCGACTCTCGCTGCTGGTAGTGACCAAGTACTTGCCGACTTTAATGGTGAAGGCGACGCCTTAGGGTGGGAAGATTA
TCTAAGCTCACTCCAAGCTTTAAACAACATGGTTAATACCACCACAGACAATGGCAAGTTGTTATACGCCAGTGCATTAG
TGTTAAAGGCACAAGAAGATAAAACCCATGCAGGTGCCTTAATCGCTTCACTTTCTAACCCATGGGGCGATACGGTTTCT
GCAAAAGTTGGCAGCACGGGCTACAAGGCTGTATGGCCACGCGACTTTTATCAGTGCGCGATGGCATTTCTAGCAATGGG
CGACAGCCAAACGCCAAAAACAGCCTTTGAATATTTGGAAAAAGTTCAGGTGAATGAAAATACTCCGGGTTATAGCGGCA
CTCCGGGATGGTTTTTACAAAAAACCCATGTAGATGGACAGATTGAATGGGTCGGCGTGCAGTTAGATCAAACAGCGATG
CCCATCATGCTCGGCTGGAAGTTATGGCAAGCAGGTGTATTAAGCGATACAGAAATAAACCATTGGTACAAAAAGATGCT
CAAACCTGCCGCAGAGTTTCTTGTTAACGGCGGCGAAGTTAATCTAGATTGGAACCATACCAATATTACGCCACTAAAAA
CTCAACAAGAGCGCTGGGAAGAACAACAAGGCTACTCGCCCTCCACAACAGCTGCAGTTATTTCAGGGCTGATAAGCGCC
AGCGATATTGCCACTCATGCTGGCGATAAAGAAGCGGCTAAGCGCTACTTAGCAACAGCTAAAAATATGCAAGGTAAAAT
CAATGGTCTGATGGTTACAACCGCAGGTCTATTGTCAGCTCCCAGCGGCGTAGAACGTGACAATACACAAACACAAGCTA
GTCTGCCCTACTTTGTGCGCTTAGCACCAAATGGAGAGCCAAATAAAGATAACAAGCTTGGCGATAACAATGGTAGAGCA
GGTTTAGATCAACGTTTGATTCTGGATGGTGGCTTCTTAGAGTTAGTGCGTTATGGCGTCACTTCAGCAAATGATAAGAC
CATCAACAATACGGTTAGCCTTATTGACAATCAGCAGCTAGAGGATAACTTAAGAGTCAAATACCAGTTCAATGCTAAAG
ATGGCTCAGCCATTCCAGGGTTTAGACGCTATGGTAATGACGGTTACGGTGAAGATGAAGTCAACGGTAATAGCTACGCC
GAGAGGGGCGTCAACACAGCTGGGCAACGCGGCCGTGTTTGGCCATTCTTTACTGGAGAGCGCGGGCACTTCGAACTCGC
TAAGTTAATCCAAAACAACAGTTTAAGTAATAAGGAACACCAAGCACTCATTAACACCTATGTGCAAGGAATGGAAACTT
TTGCTAATGAAGGGTTAATGCTACCGGAGCAAGTATGGGATGGAGTTGGTAACCCTACACGTTACAACTATAAGCTAGGC
CAAGGCACTAACTCTGCAACCCCGCTTGCATGGACTCACGCAGAGTACATTAAGCTGGTGCGCTCTATGTCCGATAAAAA
AGTATGGGATAATTATTCAATCGTGAGCGACAAACTCAAGCATTAG

Upstream 100 bases:

>100_bases
AGTAGTTCAAGCTCAATATCAGACAAAGCAACAAACGTTAACAATAAGCTTTATATATTACATAAAGTAAATTAAAAAGA
GCATCATTTTGGGGAAGCAA

Downstream 100 bases:

>100_bases
GTGTACTGATTTAGCAACTTTAGTTCAATACATTAAGCCCGTTAGCAACAAGCTAGCGGGCTTTAAAATCGGTGTATTAA
TGGGCCGATCGCATTTTTTA

Product: glucan 1,4-alpha-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>841_residues
MVGPNAFKQTVLTAAVSMALLITGCNNQHTVKSTTKSDTTPLSSDKQQNTIAPGIPGNSPTWAFAGKTGIGTSYEPYIDG
SYQDSAKNPISRVWFSLAQGIVTETMFGLIHNAQLKEMQFVISGKDFVDTEKDDTEHSVEYLHTDEDGKPLSLAYKLINK
DRDGKYQIEKHIFTDPDRDSLMMKVVFTAFESGITPYLVVNPHIDNSGANDIAQYDDANKVFTVNTTDKNSSVMSVKSSV
DFSQASVGFVGISDGLTDLNNNGDMNWQYSATSDENQGGNVALTAQYPSPIIAAGAQQAKISFDLVIGFGNNKQTSLANT
DATLAAGSDQVLADFNGEGDALGWEDYLSSLQALNNMVNTTTDNGKLLYASALVLKAQEDKTHAGALIASLSNPWGDTVS
AKVGSTGYKAVWPRDFYQCAMAFLAMGDSQTPKTAFEYLEKVQVNENTPGYSGTPGWFLQKTHVDGQIEWVGVQLDQTAM
PIMLGWKLWQAGVLSDTEINHWYKKMLKPAAEFLVNGGEVNLDWNHTNITPLKTQQERWEEQQGYSPSTTAAVISGLISA
SDIATHAGDKEAAKRYLATAKNMQGKINGLMVTTAGLLSAPSGVERDNTQTQASLPYFVRLAPNGEPNKDNKLGDNNGRA
GLDQRLILDGGFLELVRYGVTSANDKTINNTVSLIDNQQLEDNLRVKYQFNAKDGSAIPGFRRYGNDGYGEDEVNGNSYA
ERGVNTAGQRGRVWPFFTGERGHFELAKLIQNNSLSNKEHQALINTYVQGMETFANEGLMLPEQVWDGVGNPTRYNYKLG
QGTNSATPLAWTHAEYIKLVRSMSDKKVWDNYSIVSDKLKH

Sequences:
NA

Specific function: NA

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA