Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212635470

GI number:

Start: 2808092

End: 2810158

Strand: Direct

Name: Not Available

Synonym: swp_2675

Alternate gene names: NA

Gene position: NA

Preceding gene: 212635469

Following gene: 212635471

Centisome position: NA

GC content: NA

Gene sequence:

>2067_bases
ATGATATTTAAAACAAAGCGAGCTAACGCATGTCGTTTTAAAAAAAGTGTTGAGAAGATCAAGCAAAGGAAATTAAAAAG
CGCACTAATTGCAACTCTAGTCTTGCCTGCGATTTTTGCAACTGGTTGCACAGGATCATCAAAGAACATCGAAGTAAATA
ACGCGGTAAAAACAGATACTGCTCAAAGTCCAGTTTCTACGAATAAACAAGAAAAATTTGTTGTTTATCAGGTATTCACA
CGCTTATTTGGCAACAAAAACACCAACAATCAACCATGGGGAACACAACAGCAAAACGGCGTTGGCAAGTTTAGTGATTT
TGATCATACTGCATTGCAAAGTATTAAAGCCCTAGGTACCACCCACATTTGGTATACCGGCGTTCCCCATCATGCTTTGG
TTGCTGACTATAAAGCCTACGGTATTAGCGACGATGACCCAGATGTCGTTAAAGGCCGTGCAGGTTCGCCTTATGCAGTA
AAAGATTACTACAATGTGAACCCAGATCTTGCTGATAATGTCGAAAACAGGCTGCAAGAATTTAAAGACTTAATCAAACG
CACCCATGAAAACGGCATGAAGGTCGTCATCGATATTGTGCCAAACCATGTTGCTAGAGCTTATCAATCTGACTATACAC
AACATGGCGTTAGTCATTTTGGTGAAAATGATGACACCAGTACAAGTTACAAAAGGCATAATAACTTCTACTATGTGGTA
GACGATACTGGCAGCGAGCGAACAGCAAAAGCCTTTAAAGTCCCTCAGCAAACACACGAAAATGCCCCACTAGGAGGAGA
GGTTCATCCCCTCTCCGATGGTAAATTTGCAGAATTCCCCGCTAAATGGACCGGCAATGGCTCTCGCGCAGCGCAGCCTG
ATGCAAATGATTGGTACGAAACCGTTAAGATCAATTATGGCGTAAAACCAGATGGTAGTGATGACTTTCCAGCCCTGCCA
TCGTCACTCGCTAGTAAAAACGCCAATAACCATTATCAGCATTGGTTAAAGATTGAATCTCAAGATGAAGCGCTGCCTTT
TGAAAATAAACGCATTCCAAACTCATGGGTGAAATTCAAACAAATCACTCAGTTCTGGCTAGCGCAAGGCGTTGATGGTT
TTCGTTATGATATGGCTGAGATGGTACCAGTGGCATTTTGGAGTTATCTAAACTCCAATATTAAACACACTAACCCTGAG
GCGTTCCTATTAGCCGAAGTCTATAACCCTGCACTTTATCGAGACTATATACTGCTTGGAAAAATGGATTACCTGTATGA
TAAAGTGGATATGTACGATACGCTGAAGGCCATTATTCAAGGGCAAAAAAGCACAGCTGCTATCGCAGAAAAACAAGCAT
TGGTCAGTGATATCTCCTCAAACATGCTGCATTTTTTAGAAAACCATGATGAGCAAAGAATAGCCAGTGCCGATTTTGCA
GATGATGCTTTTGCAGCCTTGCCCGCTATGGTCGTTTCAACCACCATAAGCTCCGCCCCTACTCTTATTTATTTCGGACA
AGAAGTTGGTGAAAAAGCAGCAGAAAAAGCAGGTTTTGGTAGCCCGACCCGCACCAGCATTTTTGATTATATTGGCGTAC
CCGCCCATCAGCGCTACATGAGTAACGGCAAATTTGACGGCGGGCAATCAACGGAAAAAGAACTTGAACTTAGACGATAT
TACACAAAGCTGCTTAACCTAAGCCATAGCGCCTCTGCATTAACCGGAGAGTATAGCGAACTCGATAGTTTTAATCGTGC
AAACAAAGTGGCTGGCTATGATGAACAGACTTTTGCATTTAGCCGATACAATGCTGAGCAGCAATTAATTATCGTGAGTA
ACTTCAGCCAGCAACACAGTAAGACGTTTACTTTACAGTTGCCATATTCACTTATCTCGAAGTGGAACATTAACGCCAAG
AATATAGCGCTGGTGGATCTTTTAAATGAACCTATAAAGTCGTTTAACGACCAAGAGTTAACGCTAACAATTAACAGTGA
TAAGGCAACAGTTGCTTTGACCCTTGCGCCTAACGAGTCAAAAGTGCTGATGCTTAATCATCACTAA

Upstream 100 bases:

>100_bases
AAATATTTTAAACAACTTAAAAATCCCAGCCAATTCGGTGTTAGTGCTAAGCCTAAAATAATCAAAAAAACAACAAAATT
AAAAGATAGGGTTAGATTTT

Downstream 100 bases:

>100_bases
GCAGCAATTGGCACTCTCCATTAAAAGTAATACAAAGCCCGTATCGACGGGCTTTGTCATTGAGCTGGAAATCTAAAAAT
CCCCTTAGAGCATTACAACT

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>688_residues
MIFKTKRANACRFKKSVEKIKQRKLKSALIATLVLPAIFATGCTGSSKNIEVNNAVKTDTAQSPVSTNKQEKFVVYQVFT
RLFGNKNTNNQPWGTQQQNGVGKFSDFDHTALQSIKALGTTHIWYTGVPHHALVADYKAYGISDDDPDVVKGRAGSPYAV
KDYYNVNPDLADNVENRLQEFKDLIKRTHENGMKVVIDIVPNHVARAYQSDYTQHGVSHFGENDDTSTSYKRHNNFYYVV
DDTGSERTAKAFKVPQQTHENAPLGGEVHPLSDGKFAEFPAKWTGNGSRAAQPDANDWYETVKINYGVKPDGSDDFPALP
SSLASKNANNHYQHWLKIESQDEALPFENKRIPNSWVKFKQITQFWLAQGVDGFRYDMAEMVPVAFWSYLNSNIKHTNPE
AFLLAEVYNPALYRDYILLGKMDYLYDKVDMYDTLKAIIQGQKSTAAIAEKQALVSDISSNMLHFLENHDEQRIASADFA
DDAFAALPAMVVSTTISSAPTLIYFGQEVGEKAAEKAGFGSPTRTSIFDYIGVPAHQRYMSNGKFDGGQSTEKELELRRY
YTKLLNLSHSASALTGEYSELDSFNRANKVAGYDEQTFAFSRYNAEQQLIIVSNFSQQHSKTFTLQLPYSLISKWNINAK
NIALVDLLNEPIKSFNDQELTLTINSDKATVALTLAPNESKVLMLNHH

Sequences:
NA

Specific function: NA

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA