| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212635230
GI number:
Start: 2545051
End: 2548161
Strand: Direct
Name: Not Available
Synonym: swp_2425
Alternate gene names: NA
Gene position: NA
Preceding gene: 212635229
Following gene: 212635231
Centisome position: NA
GC content: NA
Gene sequence:
>3111_bases ATGACTACTTTTTCAAAAGAGCAAAGCTTAACTGAGGATGTAGAAAAGGAATGCCTTGGTGGTGGTATCGCGGGTTATTC GATGCGTAACTCCGTGGTTAGCTGGCTAATCATTATGGTGTTGCTTGTTGGGGGGATTCTTGCGTTTAAAGACCTAGGTA GGTTAGAAGATCCTGAGTTTACTCCTCGCTCTGCACTGATTGTTACTAGTTATCCTGGCGCCTCTCCAGAGCAAGTTGAA GAGGAAGTTACTCTGCTGATTGAAAATGCATTGCAGCAACTTCCGTCGGTTAAGTGGATTAAGTCTGTAAGCACTGCTGG GTTATCTCAAGTTGATGTAATGATGGAGTCCGAATATACCAGTCTTCATCTACCGCAGATCTGGGATGAGGTTCGGCGTA AAATAGGCGATCTAAAAACCTTACCGCCAGGGGCTGGAGAACCAATAGTCAATGACGACTTTGGTGATGTATACGGCATG ATTTGGGGGATCACCGGTAAAGGCTATGATATGGCTGAACTGGAACAGTTCGCCGATCAACTTCGACGGGATGTGGTTAC GCTTGATGGAGTCAGTAAAGTTGTTATTGGTGGTGTTCAGCAGCAGCAAGTTTTTGTTGAGATCTCAAACAGTAAAATCT CTGCACTGAATATTCCGATAGATCATATTGCTGCTTTATTGCAGAGCCAAAACTCAGTATCAAATGCTGGCCGGATCAGA ATTCAAAATGACACAGTAAGACTCTATCCTACCGGTGAGTTTCAGGACATCAGTGAGTTAAGAGATCTGGTGATTAGCCC TGTTGGCTCTGAGGCTAGGATATTACTAGGGGATGTCGCTGAGATCAGTCAAGGCTATGTCGAAGTACCGACAAAGCTCA TGTCAATGAACGGACTTCCAGCACTTGAGTTTGGTGTGTCATTTATGCCGGGCGAAAACGTAATTAAGGTTGGTAGCCGT GTTCAGGCACATATCGACAGTATGCTTAACAAGCAACCGATCGGCATTGAGATGGAGAACATCTACAACCAGCCTGTACA AGTAGAAAAAGCCGTCGATGGTTTTGTGTGGAGCCTTGTTGAAGCGGTAGCGATTGTTATTGGTGTACTGCTACTAACGA TGGGCTTGAAAAGTGGCATTATCATTGGGATCGTACTGATCTTATCTGTGACTGGTACGTTTATCTTCATGGAGCAAATG GGGATTAATTTACAGCGGATCTCATTAGGTGCACTGATCATTGCGCTAGGTATGTTGGTTGATAACGCCATTGTTGTGGT GGAAGGTATTCTGGTCGGTATGCAGCGAGGCAAAAACCGTTTTCGCGCCGCGATTGATATTGTTGAACAAACAAAGTGGC CATTGCTCGGTGCTACAGTTATTGCGGTGACAGCATTCGCACCGATTGGTTTATCAGAAGATATATCGGGTGAATTGATT GGTACACTGTTCTGGGTAGTATTGATCTCTTTGACGTTAAGTTGGATCACTGCAATCACAACCACGCCATTCCTTGCGGC AATGTTTTTCAAAAATGAAAAGCCAGCAGAAGCCGGTGATGAAGTCGATCCTTACAAAGGTATTGTGTTTACCTCTTACA GAAAGTTCTTAAAAGGGTGCATACGTCATAGAAAGAAGACCATGCTATTGTTGGTTATTTTGCTATTAGGTTCTGTAAAA GGCTTTGGTATGTTGAAGAATGAATTCTTCCCGCCGATGAATCTACCTAAATTTATGGTCGATACCTGGTTACCCTACAA TACAGATATCCGAGCGACAGCGTCAGAAATTAAAGCGATGGAAGACCTGGTATTGAGTCACCCAGAGGTGACTCAAGTTG CTTCTAGTGTCGGTGGAGGACATGTACGCTTTATGTTGGCTTATAAGCCTGAAAAGATGTACAACAATTACGGCAACCTA ATGGTTACTGTTAAAGATATGGATAGCCTGCTTGATGTCATGCGTGATGTGCGTGGCATGCTTGAAAGTAATTTTGCTGG GGCAAACTATAACTTCAAACGTTTCGAAATGGGTCCAGCGCCTGATGGTCGTATAGAAGCTCGTTTCCAAGGTCCAGATC CTGACGTGTTAAGAGAATTGTCTGCCAAGGCGAAAGCGATAATGGCTGCAAGCGAAGGTGCGACTGCAGTACGTGATGAT TGGCGTGAACGAACAAAAGTTGTCCGCCCTGTATTTAACGTAGAAGCCGCGAGAACGCTAGGGATCAGTAAGGCGCAGAT AGATAACGTGCTACTGGCTAACTTCTCAGGTCGCAGTGTTGGTTTATACCGTGATGGCTCAGATCTAATGCCAATTATTG TACGTCCACCGGAAGTGGAGCGTACTGATATCAATGGCATTATGGAGTTGCAGATCTGGAGTAATCAGCTCAATAAATAC GTGAGCCTATCTCAAGTCGTTCATCGTTTTGACATAGAGTTTGAAGATCCAGTCATTATGCGTCGTGACAGAGTGCGCAC CGTGATGGCGATGGCTGATGAAGACCAGATGGGGACGTTAACCACGGCAGCTGTTCAAAAGTCATTTAAAGCTGAAGTAG AGGCGATTGAATTACCTGAAGGTTATAGCATGCACTGGGGTGGTAAGCATGAGACGTCGATGGATGCACTAGTAGCGATC GGTGAAAAATTGGGTGGTGGTTATTTGGTTATGATCCTTATTACTGTGTTGCTCTTTAGCTCATTCAAAGATGCTGCGGT TATTTGGACTGTTGTACCATTTGCGATCATCGGTGTGGTTGTTGGACTCTACGGTGCGAATATGCCATTTACCTTTTTAG CACTGCTTGGCACGATGAGCTTAACTGGCATGTTAATTAAAAATGCTATCGTGTTAGTTGAGGAAATTAAGCTGCAGATC CATGAGGGGAAAGAAGATTACCTCGCGGTAATTGATGCTTCAGTTTCAAGGGTTCGTCCAGTAAGTATGGCTGCGGTAAC GACAGTTTTAGGTATGATCCCACTTATCACTGATGGGTTCTTCCAAGCGATGGCTGTGGCGATGATGGCAGGATTAACAT TCGCGACAATTCTGACTCTCATTGTTACACCGGTAATGTATACGGTTATTCATCGAGTACGGTCAGTATAA
Upstream 100 bases:
>100_bases ATTCTGGTTTAGTGGCTGGTGATAAAGTGGTTACTGCGGGTACTTACTTGATCAGTGAAAACCAGCAAGTTAAAGAACTT AAGCGTGAGCGAGGTATTTA
Downstream 100 bases:
>100_bases TTAAGTAATCGTCATTAAGAAGCCGCACTTTGCTAGAGCAATGTGCGGCTTTTTTTTATGCCTGACGATCTTGGACCTGA CGATAATAAAACAACGAATA
Product: AcrB/D/F family metabolite exporter
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1036_residues MTTFSKEQSLTEDVEKECLGGGIAGYSMRNSVVSWLIIMVLLVGGILAFKDLGRLEDPEFTPRSALIVTSYPGASPEQVE EEVTLLIENALQQLPSVKWIKSVSTAGLSQVDVMMESEYTSLHLPQIWDEVRRKIGDLKTLPPGAGEPIVNDDFGDVYGM IWGITGKGYDMAELEQFADQLRRDVVTLDGVSKVVIGGVQQQQVFVEISNSKISALNIPIDHIAALLQSQNSVSNAGRIR IQNDTVRLYPTGEFQDISELRDLVISPVGSEARILLGDVAEISQGYVEVPTKLMSMNGLPALEFGVSFMPGENVIKVGSR VQAHIDSMLNKQPIGIEMENIYNQPVQVEKAVDGFVWSLVEAVAIVIGVLLLTMGLKSGIIIGIVLILSVTGTFIFMEQM GINLQRISLGALIIALGMLVDNAIVVVEGILVGMQRGKNRFRAAIDIVEQTKWPLLGATVIAVTAFAPIGLSEDISGELI GTLFWVVLISLTLSWITAITTTPFLAAMFFKNEKPAEAGDEVDPYKGIVFTSYRKFLKGCIRHRKKTMLLLVILLLGSVK GFGMLKNEFFPPMNLPKFMVDTWLPYNTDIRATASEIKAMEDLVLSHPEVTQVASSVGGGHVRFMLAYKPEKMYNNYGNL MVTVKDMDSLLDVMRDVRGMLESNFAGANYNFKRFEMGPAPDGRIEARFQGPDPDVLRELSAKAKAIMAASEGATAVRDD WRERTKVVRPVFNVEAARTLGISKAQIDNVLLANFSGRSVGLYRDGSDLMPIIVRPPEVERTDINGIMELQIWSNQLNKY VSLSQVVHRFDIEFEDPVIMRRDRVRTVMAMADEDQMGTLTTAAVQKSFKAEVEAIELPEGYSMHWGGKHETSMDALVAI GEKLGGGYLVMILITVLLFSSFKDAAVIWTVVPFAIIGVVVGLYGANMPFTFLALLGTMSLTGMLIKNAIVLVEEIKLQI HEGKEDYLAVIDASVSRVRPVSMAAVTTVLGMIPLITDGFFQAMAVAMMAGLTFATILTLIVTPVMYTVIHRVRSV
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA